RNA–Protein interactions for RNA: ENST00000413985.1

CRIM1-202, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-202ENST00000413985 MYH13Q9UKX3 1938 aa13.8□□□□□ -0.2
CRIM1-202ENST00000413985 XRCC5P13010 732 aaKnown RBP13.8□□□□□ -0.2
CRIM1-202ENST00000413985 SPP2Q13103 211 aa13.8□□□□□ -0.2
CRIM1-202ENST00000413985 PDE3AQ14432 1141 aa13.8□□□□□ -0.2
CRIM1-202ENST00000413985 PROCA1Q8NCQ7 364 aaPredicted RBP13.8□□□□□ -0.2
CRIM1-202ENST00000413985 USP6NLQ92738 828 aa13.8□□□□□ -0.2
CRIM1-202ENST00000413985 THEGQ9P2T0 379 aa13.8□□□□□ -0.2
CRIM1-202ENST00000413985 MORF4L1Q9UBU8 362 aa13.8□□□□□ -0.2
CRIM1-202ENST00000413985 TCF20Q9UGU0 1960 aaKnown RBP13.8□□□□□ -0.2
CRIM1-202ENST00000413985 TRIM43BA6NCK2 446 aa13.79□□□□□ -0.2
CRIM1-202ENST00000413985 APAF1O14727 1248 aa13.79□□□□□ -0.2
CRIM1-202ENST00000413985 CTNND1O60716 968 aaKnown RBP13.79□□□□□ -0.2
CRIM1-202ENST00000413985 DNAJB2P25686 324 aa13.79□□□□□ -0.2
CRIM1-202ENST00000413985 ITGB8P26012 769 aa13.79□□□□□ -0.2
CRIM1-202ENST00000413985 MAP3K10Q02779 954 aa13.79□□□□□ -0.2
CRIM1-202ENST00000413985 WDR43Q15061 677 aaKnown RBP eCLIP13.79□□□□□ -0.2
CRIM1-202ENST00000413985 TRIM60Q495X7 471 aa13.79□□□□□ -0.2
CRIM1-202ENST00000413985 BEND3Q5T5X7 828 aa13.79□□□□□ -0.2
CRIM1-202ENST00000413985 ZSCAN29Q8IWY8 852 aaPredicted RBP13.79□□□□□ -0.2
CRIM1-202ENST00000413985 VGLL2Q8N8G2 317 aa13.79□□□□□ -0.2
CRIM1-202ENST00000413985 SOCS4Q8WXH5 440 aa13.79□□□□□ -0.2
CRIM1-202ENST00000413985 TRIM43Q96BQ3 446 aaPredicted RBP13.79□□□□□ -0.2
CRIM1-202ENST00000413985 RNPC3Q96LT9 517 aaKnown RBP13.79□□□□□ -0.2
CRIM1-202ENST00000413985 PORCNQ9H237 461 aa13.79□□□□□ -0.2
CRIM1-202ENST00000413985 DDX4Q9NQI0 724 aaKnown RBP13.79□□□□□ -0.2
CRIM1-202ENST00000413985 FLRT1Q9NZU1 646 aa13.79□□□□□ -0.2
CRIM1-202ENST00000413985 MROH5Q6ZUA9 1318 aa13.79□□□□□ -0.2
CRIM1-202ENST00000413985 RFX7Q2KHR2 1363 aa13.79□□□□□ -0.2
CRIM1-202ENST00000413985 CCDC85BQ15834 202 aaPredicted RBP13.78□□□□□ -0.2
CRIM1-202ENST00000413985 TWISTNBQ3B726 338 aaPredicted RBP13.78□□□□□ -0.2
CRIM1-202ENST00000413985 Q3C1V9 767 aa13.78□□□□□ -0.2
CRIM1-202ENST00000413985 METTL24Q5JXM2 366 aa13.78□□□□□ -0.2
CRIM1-202ENST00000413985 GJC2Q5T442 439 aaPredicted RBP13.78□□□□□ -0.2
CRIM1-202ENST00000413985 KAZALD1Q96I82 304 aa13.78□□□□□ -0.2
CRIM1-202ENST00000413985 ZNF576Q9H609 170 aa13.78□□□□□ -0.2
CRIM1-202ENST00000413985 PDLIM7Q9NR12 457 aa13.78□□□□□ -0.2
CRIM1-202ENST00000413985 ATAD5Q96QE3 1844 aa13.78□□□□□ -0.2
CRIM1-202ENST00000413985 MRPS5P82675 430 aaKnown RBP13.77□□□□□ -0.21
CRIM1-202ENST00000413985 RRP1BQ14684 758 aaKnown RBP13.77□□□□□ -0.21
CRIM1-202ENST00000413985 MORN1Q5T089 497 aa13.77□□□□□ -0.21
CRIM1-202ENST00000413985 GPR142Q7Z601 462 aa13.77□□□□□ -0.21
CRIM1-202ENST00000413985 ALYREFQ86V81 257 aaKnown RBP13.77□□□□□ -0.21
CRIM1-202ENST00000413985 SUCLG2Q96I99 432 aa13.77□□□□□ -0.21
CRIM1-202ENST00000413985 P2RX7Q99572 595 aaKnown RBP13.77□□□□□ -0.21
CRIM1-202ENST00000413985 APBA2Q99767 749 aa13.77□□□□□ -0.21
CRIM1-202ENST00000413985 LRFN3Q9BTN0 628 aa13.77□□□□□ -0.21
CRIM1-202ENST00000413985 CHMP4AQ9BY43 222 aa13.77□□□□□ -0.21
CRIM1-202ENST00000413985 DDX20Q9UHI6 824 aaKnown RBP13.77□□□□□ -0.21
CRIM1-202ENST00000413985 GRM8O00222 908 aa13.76□□□□□ -0.21
CRIM1-202ENST00000413985 DNM1LO00429 736 aa13.76□□□□□ -0.21
CRIM1-202ENST00000413985 RGS2P41220 211 aa13.76□□□□□ -0.21
CRIM1-202ENST00000413985 PICALMQ13492 652 aa13.76□□□□□ -0.21
CRIM1-202ENST00000413985 SLC39A5Q6ZMH5 540 aa13.76□□□□□ -0.21
CRIM1-202ENST00000413985 TRMT44Q8IYL2 757 aaKnown RBP13.76□□□□□ -0.21
CRIM1-202ENST00000413985 ZNF280CQ8ND82 737 aa13.76□□□□□ -0.21
CRIM1-202ENST00000413985 TRPV1Q8NER1 839 aa13.76□□□□□ -0.21
CRIM1-202ENST00000413985 KLHDC4Q8TBB5 520 aa13.76□□□□□ -0.21
CRIM1-202ENST00000413985 LPAR1Q92633 364 aa13.76□□□□□ -0.21
CRIM1-202ENST00000413985 C1QTNF1Q9BXJ1 281 aa13.76□□□□□ -0.21
CRIM1-202ENST00000413985 IDI2Q9BXS1 227 aa13.76□□□□□ -0.21
CRIM1-202ENST00000413985 PRDM12Q9H4Q4 367 aa13.76□□□□□ -0.21
CRIM1-202ENST00000413985 EPHX3Q9H6B9 360 aa13.76□□□□□ -0.21
CRIM1-202ENST00000413985 HCN4Q9Y3Q4 1203 aa13.76□□□□□ -0.21
CRIM1-202ENST00000413985 NDUFB9Q9Y6M9 179 aa13.76□□□□□ -0.21
CRIM1-202ENST00000413985 ENTPD3O75355 529 aa13.75□□□□□ -0.21
CRIM1-202ENST00000413985 PDE8BO95263 885 aa13.75□□□□□ -0.21
CRIM1-202ENST00000413985 CNGA1P29973 690 aa13.75□□□□□ -0.21
CRIM1-202ENST00000413985 ZEB1P37275 1124 aaPredicted RBP13.75□□□□□ -0.21
CRIM1-202ENST00000413985 CALD1Q05682 793 aaKnown RBP13.75□□□□□ -0.21
CRIM1-202ENST00000413985 PABPC4Q13310 644 aaKnown RBP eCLIP13.75□□□□□ -0.21
CRIM1-202ENST00000413985 ADGRE1Q14246 886 aa13.75□□□□□ -0.21
CRIM1-202ENST00000413985 ANO1Q5XXA6 986 aa13.75□□□□□ -0.21
CRIM1-202ENST00000413985 GPRC5AQ8NFJ5 357 aa13.75□□□□□ -0.21
CRIM1-202ENST00000413985 WDR66Q8TBY9 1149 aa13.75□□□□□ -0.21
CRIM1-202ENST00000413985 SNX27Q96L92 541 aa13.75□□□□□ -0.21
CRIM1-202ENST00000413985 RBPJLQ9UBG7 517 aa13.75□□□□□ -0.21
CRIM1-202ENST00000413985 MYH2Q9UKX2 1941 aa13.74□□□□□ -0.21
CRIM1-202ENST00000413985 FGFR2P21802 821 aa13.74□□□□□ -0.21
CRIM1-202ENST00000413985 PBX2P40425 430 aa13.74□□□□□ -0.21
CRIM1-202ENST00000413985 HERVK_113P62684 666 aa13.74□□□□□ -0.21
CRIM1-202ENST00000413985 IRX3P78415 501 aaPredicted RBP13.74□□□□□ -0.21
CRIM1-202ENST00000413985 TIFAQ96CG3 184 aa13.74□□□□□ -0.21
CRIM1-202ENST00000413985 XIRP2A4UGR9 3374 aa13.73□□□□□ -0.21
CRIM1-202ENST00000413985 MAPK4P31152 587 aa13.73□□□□□ -0.21
CRIM1-202ENST00000413985 ERVK-9P63128 1117 aa13.73□□□□□ -0.21
CRIM1-202ENST00000413985 ERVK-24P63145 666 aa13.73□□□□□ -0.21
CRIM1-202ENST00000413985 MTMR2Q13614 643 aa13.73□□□□□ -0.21
CRIM1-202ENST00000413985 RALBP1Q15311 655 aa13.73□□□□□ -0.21
CRIM1-202ENST00000413985 SH3D19Q5HYK7 790 aa13.73□□□□□ -0.21
CRIM1-202ENST00000413985 PLEKHH3Q7Z736 793 aa13.73□□□□□ -0.21
CRIM1-202ENST00000413985 GAS2L1Q99501 681 aaPredicted RBP13.73□□□□□ -0.21
CRIM1-202ENST00000413985 PAGR1Q9BTK6 254 aa13.73□□□□□ -0.21
CRIM1-202ENST00000413985 ARIH1Q9Y4X5 557 aaPredicted RBP13.73□□□□□ -0.21
CRIM1-202ENST00000413985 MYCNP04198 464 aaPredicted RBP13.72□□□□□ -0.21
CRIM1-202ENST00000413985 LDHBP07195 334 aaKnown RBP13.72□□□□□ -0.21
CRIM1-202ENST00000413985 CYP2C19P33261 490 aa13.72□□□□□ -0.21
CRIM1-202ENST00000413985 TFF2Q03403 129 aa13.72□□□□□ -0.21
CRIM1-202ENST00000413985 MAP2K5Q13163 448 aa13.72□□□□□ -0.21
CRIM1-202ENST00000413985 SNX17Q15036 470 aa13.72□□□□□ -0.21
CRIM1-202ENST00000413985 AKNAD1Q5T1N1 836 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms