RNA–Protein interactions for RNA: ENST00000413971.5

TOP2B-202, Transcript of DNA topoisomerase II beta, humanhuman

TSL 5

Gene TOP2B, Length 2,049 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-202ENST00000413971 HOMER1Q86YM7 354 aa5.47□□□□□ -1.53
TOP2B-202ENST00000413971 KIAA0825Q8IV33 1275 aa5.47□□□□□ -1.53
TOP2B-202ENST00000413971 CELF2-AS1Q8N7Q2 184 aa5.47□□□□□ -1.53
TOP2B-202ENST00000413971 KCNH5Q8NCM2 988 aa5.47□□□□□ -1.53
TOP2B-202ENST00000413971 ANAPC16Q96DE5 110 aa5.47□□□□□ -1.53
TOP2B-202ENST00000413971 SNX27Q96L92 541 aa5.47□□□□□ -1.53
TOP2B-202ENST00000413971 C2orf49Q9BVC5 232 aaPredicted RBP5.47□□□□□ -1.53
TOP2B-202ENST00000413971 PRDM9Q9NQV7 894 aa5.47□□□□□ -1.53
TOP2B-202ENST00000413971 ADAMTS1Q9UHI8 967 aa5.47□□□□□ -1.53
TOP2B-202ENST00000413971 LEMD3Q9Y2U8 911 aa5.47□□□□□ -1.53
TOP2B-202ENST00000413971 C4AP0C0L4 1744 aa5.46□□□□□ -1.53
TOP2B-202ENST00000413971 CCDC88AQ3V6T2 1871 aa5.46□□□□□ -1.53
TOP2B-202ENST00000413971 WDHD1O75717 1129 aaPredicted RBP5.46□□□□□ -1.54
TOP2B-202ENST00000413971 USP17L7P0C7H9 530 aa5.46□□□□□ -1.54
TOP2B-202ENST00000413971 SETQ01105 290 aaPredicted RBP5.46□□□□□ -1.54
TOP2B-202ENST00000413971 BRDTQ58F21 947 aaPredicted RBP5.46□□□□□ -1.54
TOP2B-202ENST00000413971 USPL1Q5W0Q7 1092 aa5.46□□□□□ -1.54
TOP2B-202ENST00000413971 CST9Q5W186 159 aa5.46□□□□□ -1.54
TOP2B-202ENST00000413971 EPS8L3Q8TE67 593 aaKnown RBP5.46□□□□□ -1.54
TOP2B-202ENST00000413971 RABGEF1Q9UJ41 708 aa5.46□□□□□ -1.54
TOP2B-202ENST00000413971 MYCP01106 439 aaPredicted RBP5.45□□□□□ -1.54
TOP2B-202ENST00000413971 GDF10P55107 478 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 PKN2Q16513 984 aaKnown RBP5.45□□□□□ -1.54
TOP2B-202ENST00000413971 SYCP2LQ5T4T6 812 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 PNMA8AQ86V59 439 aaPredicted RBP5.45□□□□□ -1.54
TOP2B-202ENST00000413971 SCUBE3Q8IX30 993 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 FAM9BQ8IZU0 186 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 FAM122AQ96E09 287 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 SLC10A4Q96EP9 437 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 IL17RAQ96F46 866 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 FEZ1Q99689 392 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 PLCD4Q9BRC7 762 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 CDK19Q9BWU1 502 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 UNC93B1Q9H1C4 597 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 CHST12Q9NRB3 414 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 GEMIN8Q9NWZ8 242 aaKnown RBP5.45□□□□□ -1.54
TOP2B-202ENST00000413971 TMEM260Q9NX78 707 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 SALL2Q9Y467 1007 aaPredicted RBP5.45□□□□□ -1.54
TOP2B-202ENST00000413971 SCN4AP35499 1836 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 ADAMTSL1Q8N6G6 1762 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 CACNA1AO00555 2505 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 HMGB1P1B2RPK0 211 aaPredicted RBP5.45□□□□□ -1.54
TOP2B-202ENST00000413971 VIL1P09327 827 aaKnown RBP5.45□□□□□ -1.54
TOP2B-202ENST00000413971 GYS1P13807 737 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 EPHX2P34913 555 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 USP5P45974 858 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 EXOSC10Q01780 885 aaKnown RBP5.45□□□□□ -1.54
TOP2B-202ENST00000413971 LRRC41Q15345 812 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 C4orf48Q5BLP8 95 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 LINC00116Q8NCU8 138 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 TRPM4Q8TD43 1214 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.45□□□□□ -1.541e-21■■■■■ 147.8
TOP2B-202ENST00000413971 SAGE1Q9NXZ1 904 aa5.45□□□□□ -1.54
TOP2B-202ENST00000413971 LDHAP00338 332 aaKnown RBP5.44□□□□□ -1.54
TOP2B-202ENST00000413971 NOS2P35228 1153 aa5.44□□□□□ -1.54
TOP2B-202ENST00000413971 ZAP70P43403 619 aa5.44□□□□□ -1.54
TOP2B-202ENST00000413971 PSEN2P49810 448 aa5.44□□□□□ -1.54
TOP2B-202ENST00000413971 ST13P50502 369 aaKnown RBP5.44□□□□□ -1.54
TOP2B-202ENST00000413971 C8orf34Q49A92 452 aa5.44□□□□□ -1.54
TOP2B-202ENST00000413971 AKAP4Q5JQC9 854 aa5.44□□□□□ -1.54
TOP2B-202ENST00000413971 TRAPPC3LQ5T215 181 aa5.44□□□□□ -1.54
TOP2B-202ENST00000413971 CCSAPQ6IQ19 270 aaPredicted RBP5.44□□□□□ -1.54
TOP2B-202ENST00000413971 PTCRAQ6ISU1 281 aaPredicted RBP5.44□□□□□ -1.54
TOP2B-202ENST00000413971 CLEC4GQ6UXB4 293 aa5.44□□□□□ -1.54
TOP2B-202ENST00000413971 C16orf86Q6ZW13 317 aa5.44□□□□□ -1.54
TOP2B-202ENST00000413971 SAPCD2Q86UD0 394 aa5.44□□□□□ -1.54
TOP2B-202ENST00000413971 SLC39A13Q96H72 371 aa5.44□□□□□ -1.54
TOP2B-202ENST00000413971 EAF1Q96JC9 268 aaPredicted RBP5.44□□□□□ -1.54
TOP2B-202ENST00000413971 HHIPL1Q96JK4 782 aa5.44□□□□□ -1.54
TOP2B-202ENST00000413971 KRTAP3-3Q9BYR6 98 aa5.44□□□□□ -1.54
TOP2B-202ENST00000413971 KRTAP3-2Q9BYR7 98 aa5.44□□□□□ -1.54
TOP2B-202ENST00000413971 HACL1Q9UJ83 578 aa5.44□□□□□ -1.54
TOP2B-202ENST00000413971 ATP8A1Q9Y2Q0 1164 aa5.44□□□□□ -1.54
TOP2B-202ENST00000413971 DXOO77932 396 aaKnown RBP5.43□□□□□ -1.54
TOP2B-202ENST00000413971 POU3F3P20264 500 aaPredicted RBP5.43□□□□□ -1.54
TOP2B-202ENST00000413971 AGERQ15109 404 aa5.43□□□□□ -1.54
TOP2B-202ENST00000413971 SLC9A9Q8IVB4 645 aa5.43□□□□□ -1.54
TOP2B-202ENST00000413971 TTLL6Q8N841 843 aa5.43□□□□□ -1.54
TOP2B-202ENST00000413971 SMARCC1Q92922 1105 aaPredicted RBP5.43□□□□□ -1.54
TOP2B-202ENST00000413971 FOXJ1Q92949 421 aa5.43□□□□□ -1.54
TOP2B-202ENST00000413971 ZIC5Q96T25 663 aa5.43□□□□□ -1.54
TOP2B-202ENST00000413971 GGNBP2Q9H3C7 697 aa5.43□□□□□ -1.54
TOP2B-202ENST00000413971 ST7Q9NRC1 585 aa5.43□□□□□ -1.54
TOP2B-202ENST00000413971 RAPGEFL1Q9UHV5 662 aa5.43□□□□□ -1.54
TOP2B-202ENST00000413971 MSRB2Q9Y3D2 182 aa5.43□□□□□ -1.54
TOP2B-202ENST00000413971 R3HCC1Q9Y3T6 440 aaKnown RBP5.43□□□□□ -1.54
TOP2B-202ENST00000413971 COMMD10Q9Y6G5 202 aa5.43□□□□□ -1.54
TOP2B-202ENST00000413971 VCANP13611 3396 aa5.43□□□□□ -1.54
TOP2B-202ENST00000413971 MINDY4BA8MYZ0 360 aa5.43□□□□□ -1.54
TOP2B-202ENST00000413971 BACH1O14867 736 aa5.43□□□□□ -1.54
TOP2B-202ENST00000413971 CPNE3O75131 537 aaKnown RBP5.43□□□□□ -1.54
TOP2B-202ENST00000413971 CNGA1P29973 690 aa5.43□□□□□ -1.54
TOP2B-202ENST00000413971 NOGQ13253 232 aa5.43□□□□□ -1.54
TOP2B-202ENST00000413971 DHX8Q14562 1220 aaKnown RBP5.43□□□□□ -1.54
TOP2B-202ENST00000413971 C21orf62-AS1Q17RA5 79 aa5.43□□□□□ -1.54
TOP2B-202ENST00000413971 CCDC81Q6ZN84 652 aa5.43□□□□□ -1.54
TOP2B-202ENST00000413971 ZNF687Q8N1G0 1237 aa5.43□□□□□ -1.54
TOP2B-202ENST00000413971 ANKRD24Q8TF21 1146 aa5.43□□□□□ -1.54
TOP2B-202ENST00000413971 TRIM56Q9BRZ2 755 aaKnown RBP5.43□□□□□ -1.54
TOP2B-202ENST00000413971 FAM8A1Q9UBU6 413 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms