RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 ZKSCAN3Q9BRR0 538 aa7.72□□□□□ -1.17
NOD1-203ENST00000413433 CRISPLD1Q9H336 500 aa7.72□□□□□ -1.17
NOD1-203ENST00000413433 RUBCNLQ9H714 662 aa7.72□□□□□ -1.17
NOD1-203ENST00000413433 GPN3Q9UHW5 284 aaPredicted RBP7.72□□□□□ -1.17
NOD1-203ENST00000413433 MAPK8IP1Q9UQF2 711 aa7.72□□□□□ -1.17
NOD1-203ENST00000413433 LRRC9Q6ZRR7 1453 aa7.72□□□□□ -1.17
NOD1-203ENST00000413433 ESYT3A0FGR9 886 aa7.71□□□□□ -1.18
NOD1-203ENST00000413433 H7C1W4 665 aa7.71□□□□□ -1.18
NOD1-203ENST00000413433 PDPK1O15530 556 aa7.71□□□□□ -1.18
NOD1-203ENST00000413433 OIP5O43482 229 aa7.71□□□□□ -1.18
NOD1-203ENST00000413433 FURINP09958 794 aa7.71□□□□□ -1.18
NOD1-203ENST00000413433 TFE3P19532 575 aaPredicted RBP7.71□□□□□ -1.18
NOD1-203ENST00000413433 TARSP26639 723 aaKnown RBP7.71□□□□□ -1.18
NOD1-203ENST00000413433 RPS26P62854 115 aaKnown RBP7.71□□□□□ -1.18
NOD1-203ENST00000413433 HYAL2Q12891 473 aa7.71□□□□□ -1.18
NOD1-203ENST00000413433 DDR2Q16832 855 aa7.71□□□□□ -1.18
NOD1-203ENST00000413433 CWF19L2Q2TBE0 894 aaKnown RBP7.71□□□□□ -1.18
NOD1-203ENST00000413433 SAMD5Q5TGI4 173 aa7.71□□□□□ -1.18
NOD1-203ENST00000413433 OR6P1Q8NGX9 317 aa7.71□□□□□ -1.18
NOD1-203ENST00000413433 MIR1-1HGQ9H1L0 117 aa7.71□□□□□ -1.18
NOD1-203ENST00000413433 ST7Q9NRC1 585 aa7.71□□□□□ -1.18
NOD1-203ENST00000413433 MSRB2Q9Y3D2 182 aa7.71□□□□□ -1.18
NOD1-203ENST00000413433 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.71□□□□□ -1.18
NOD1-203ENST00000413433 VPS8Q8N3P4 1428 aa7.7□□□□□ -1.18
NOD1-203ENST00000413433 NLRP1Q9C000 1473 aa7.7□□□□□ -1.18
NOD1-203ENST00000413433 CPS1P31327 1500 aa7.7□□□□□ -1.18
NOD1-203ENST00000413433 ENC1O14682 589 aa7.7□□□□□ -1.18
NOD1-203ENST00000413433 MX2P20592 715 aa7.7□□□□□ -1.18
NOD1-203ENST00000413433 ZNF165P49910 485 aa7.7□□□□□ -1.18
NOD1-203ENST00000413433 DBN1Q16643 649 aa7.7□□□□□ -1.18
NOD1-203ENST00000413433 EFHC2Q5JST6 749 aa7.7□□□□□ -1.18
NOD1-203ENST00000413433 RIPOR1Q6ZS17 1223 aa7.7□□□□□ -1.18
NOD1-203ENST00000413433 NLRP8Q86W28 1048 aa7.7□□□□□ -1.18
NOD1-203ENST00000413433 TRIM42Q8IWZ5 723 aa7.7□□□□□ -1.18
NOD1-203ENST00000413433 CELF2-AS1Q8N7Q2 184 aa7.7□□□□□ -1.18
NOD1-203ENST00000413433 NECAB3Q96P71 396 aaPredicted RBP7.7□□□□□ -1.18
NOD1-203ENST00000413433 SLC26A8Q96RN1 970 aa7.7□□□□□ -1.18
NOD1-203ENST00000413433 ZCCHC2Q9C0B9 1178 aaKnown RBP7.7□□□□□ -1.18
NOD1-203ENST00000413433 MKL2Q9ULH7 1088 aa7.7□□□□□ -1.18
NOD1-203ENST00000413433 SAMM50Q9Y512 469 aa7.7□□□□□ -1.18
NOD1-203ENST00000413433 PPME1Q9Y570 386 aa7.7□□□□□ -1.18
NOD1-203ENST00000413433 VWDEQ8N2E2 1590 aa7.7□□□□□ -1.18
NOD1-203ENST00000413433 ABCC3O15438 1527 aa7.69□□□□□ -1.18
NOD1-203ENST00000413433 S100BP04271 92 aaPredicted RBP7.69□□□□□ -1.18
NOD1-203ENST00000413433 IDI1Q13907 227 aa7.69□□□□□ -1.18
NOD1-203ENST00000413433 RASGRF1Q13972 1273 aa7.69□□□□□ -1.18
NOD1-203ENST00000413433 MTERF2Q49AM1 385 aa7.69□□□□□ -1.18
NOD1-203ENST00000413433 HSP90AB2PQ58FF8 381 aa7.69□□□□□ -1.18
NOD1-203ENST00000413433 LARP1BQ659C4 914 aaKnown RBP7.69□□□□□ -1.18
NOD1-203ENST00000413433 LILRB2Q8N423 598 aa7.69□□□□□ -1.18
NOD1-203ENST00000413433 FAM169BQ8N8A8 192 aa7.69□□□□□ -1.18
NOD1-203ENST00000413433 LRRC3Q9BY71 257 aa7.69□□□□□ -1.18
NOD1-203ENST00000413433 EID1Q9Y6B2 187 aa7.69□□□□□ -1.18
NOD1-203ENST00000413433 KIF15Q9NS87 1388 aa7.69□□□□□ -1.18
NOD1-203ENST00000413433 MED14O60244 1454 aa7.68□□□□□ -1.18
NOD1-203ENST00000413433 ERVK-7P63135 1459 aa7.68□□□□□ -1.18
NOD1-203ENST00000413433 LRRC7Q96NW7 1537 aa7.68□□□□□ -1.18
NOD1-203ENST00000413433 BPNT1O95861 308 aa7.68□□□□□ -1.18
NOD1-203ENST00000413433 F13A1P00488 732 aa7.68□□□□□ -1.18
NOD1-203ENST00000413433 ACPPP15309 386 aa7.68□□□□□ -1.18
NOD1-203ENST00000413433 ITPKAP23677 461 aa7.68□□□□□ -1.18
NOD1-203ENST00000413433 SOX18P35713 384 aa7.68□□□□□ -1.18
NOD1-203ENST00000413433 GRIA4P48058 902 aa7.68□□□□□ -1.18
NOD1-203ENST00000413433 GIPRP48546 466 aa7.68□□□□□ -1.18
NOD1-203ENST00000413433 KCNQ4P56696 695 aa7.68□□□□□ -1.18
NOD1-203ENST00000413433 PLAURQ03405 335 aa7.68□□□□□ -1.18
NOD1-203ENST00000413433 MPP2Q14168 576 aa7.68□□□□□ -1.18
NOD1-203ENST00000413433 FXNQ16595 210 aa7.68□□□□□ -1.18
NOD1-203ENST00000413433 CCDC84Q86UT8 332 aaPredicted RBP7.68□□□□□ -1.18
NOD1-203ENST00000413433 FBXO27Q8NI29 283 aa7.68□□□□□ -1.18
NOD1-203ENST00000413433 ASAP3Q8TDY4 903 aa7.68□□□□□ -1.18
NOD1-203ENST00000413433 GATAD2BQ8WXI9 593 aa7.68□□□□□ -1.18
NOD1-203ENST00000413433 JARID2Q92833 1246 aaPredicted RBP7.68□□□□□ -1.18
NOD1-203ENST00000413433 GTPBP3Q969Y2 492 aaKnown RBP7.68□□□□□ -1.18
NOD1-203ENST00000413433 FEZ1Q99689 392 aa7.68□□□□□ -1.18
NOD1-203ENST00000413433 KANSL2Q9H9L4 492 aa7.68□□□□□ -1.18
NOD1-203ENST00000413433 SEC31BQ9NQW1 1179 aa7.68□□□□□ -1.18
NOD1-203ENST00000413433 MYOM3Q5VTT5 1437 aa7.68□□□□□ -1.18
NOD1-203ENST00000413433 ARHGEF5Q12774 1597 aa7.67□□□□□ -1.18
NOD1-203ENST00000413433 MED1Q15648 1581 aaPredicted RBP7.67□□□□□ -1.18
NOD1-203ENST00000413433 ALKQ9UM73 1620 aa7.67□□□□□ -1.18
NOD1-203ENST00000413433 KIF4AO95239 1232 aa7.67□□□□□ -1.18
NOD1-203ENST00000413433 PARNO95453 639 aaKnown RBP7.67□□□□□ -1.18
NOD1-203ENST00000413433 THBS1P07996 1170 aa7.67□□□□□ -1.18
NOD1-203ENST00000413433 IMPDH2P12268 514 aa7.67□□□□□ -1.18
NOD1-203ENST00000413433 NFKB1P19838 968 aa7.67□□□□□ -1.18
NOD1-203ENST00000413433 GYS2P54840 703 aa7.67□□□□□ -1.18
NOD1-203ENST00000413433 PPP2R3AQ06190 1150 aa7.67□□□□□ -1.18
NOD1-203ENST00000413433 SEPT6Q14141 434 aa7.67□□□□□ -1.18
NOD1-203ENST00000413433 SPRED3Q2MJR0 410 aa7.67□□□□□ -1.18
NOD1-203ENST00000413433 PLEKHG6Q3KR16 790 aa7.67□□□□□ -1.18
NOD1-203ENST00000413433 FIGNL1Q6PIW4 674 aa7.67□□□□□ -1.18
NOD1-203ENST00000413433 BNC2Q6ZN30 1099 aaPredicted RBP7.67□□□□□ -1.18
NOD1-203ENST00000413433 GK5Q6ZS86 529 aa7.67□□□□□ -1.18
NOD1-203ENST00000413433 C16orf86Q6ZW13 317 aa7.67□□□□□ -1.18
NOD1-203ENST00000413433 GAS2L1Q99501 681 aaPredicted RBP7.67□□□□□ -1.18
NOD1-203ENST00000413433 GSX2Q9BZM3 304 aa7.67□□□□□ -1.18
NOD1-203ENST00000413433 DZANK1Q9NVP4 752 aa7.67□□□□□ -1.18
NOD1-203ENST00000413433 TMEM260Q9NX78 707 aa7.67□□□□□ -1.18
NOD1-203ENST00000413433 DDX56Q9NY93 547 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms