RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 FMNL1O95466 1100 aaPredicted RBP23.61■■□□□ 1.37
CPSF7-204ENST00000413232 MTFR1Q15390 333 aa23.61■■□□□ 1.37
CPSF7-204ENST00000413232 SLC4A8Q2Y0W8 1093 aa23.61■■□□□ 1.37
CPSF7-204ENST00000413232 TEX11Q8IYF3 940 aa23.61■■□□□ 1.37
CPSF7-204ENST00000413232 AATFQ9NY61 560 aaKnown RBP eCLIP23.61■■□□□ 1.37
CPSF7-204ENST00000413232 DBNLQ9UJU6 430 aaKnown RBP23.61■■□□□ 1.37
CPSF7-204ENST00000413232 COL2A1P02458 1487 aaPredicted RBP23.61■■□□□ 1.37
CPSF7-204ENST00000413232 MAP4K4O95819 1239 aaPredicted RBP23.6■■□□□ 1.37
CPSF7-204ENST00000413232 PRMT2P55345 433 aa23.6■■□□□ 1.37
CPSF7-204ENST00000413232 EAF2Q96CJ1 260 aaPredicted RBP23.6■■□□□ 1.37
CPSF7-204ENST00000413232 ZAP70P43403 619 aa23.59■■□□□ 1.37
CPSF7-204ENST00000413232 CCDC158Q5M9N0 1113 aa23.59■■□□□ 1.37
CPSF7-204ENST00000413232 TREML2Q5T2D2 321 aa23.59■■□□□ 1.37
CPSF7-204ENST00000413232 NAA16Q6N069 864 aaPredicted RBP23.59■■□□□ 1.37
CPSF7-204ENST00000413232 CCDC8Q9H0W5 538 aaPredicted RBP23.59■■□□□ 1.37
CPSF7-204ENST00000413232 PIH1D3Q9NQM4 214 aaKnown RBP23.59■■□□□ 1.37
CPSF7-204ENST00000413232 GABRQQ9UN88 632 aa23.59■■□□□ 1.37
CPSF7-204ENST00000413232 LOC285556D6RIA3 1793 aa23.59■■□□□ 1.37
CPSF7-204ENST00000413232 CEP290O15078 2479 aa23.59■■□□□ 1.37
CPSF7-204ENST00000413232 MYPNQ86TC9 1320 aa23.59■■□□□ 1.37
CPSF7-204ENST00000413232 PRKCZQ05513 592 aa23.58■■□□□ 1.37
CPSF7-204ENST00000413232 PANK1Q8TE04 598 aa23.58■■□□□ 1.37
CPSF7-204ENST00000413232 ZNF512BQ96KM6 892 aaPredicted RBP23.58■■□□□ 1.37
CPSF7-204ENST00000413232 SLC45A1Q9Y2W3 748 aa23.58■■□□□ 1.37
CPSF7-204ENST00000413232 CAP2P40123 477 aa23.57■■□□□ 1.36
CPSF7-204ENST00000413232 PPP4CP60510 307 aa23.57■■□□□ 1.36
CPSF7-204ENST00000413232 JAG1P78504 1218 aa23.57■■□□□ 1.36
CPSF7-204ENST00000413232 SPP2Q13103 211 aa23.57■■□□□ 1.36
CPSF7-204ENST00000413232 CEP85Q6P2H3 762 aa23.57■■□□□ 1.36
CPSF7-204ENST00000413232 TGFBRAP1Q8WUH2 860 aa23.57■■□□□ 1.36
CPSF7-204ENST00000413232 MYH1P12882 1939 aa23.57■■□□□ 1.36
CPSF7-204ENST00000413232 HOXD10P28358 340 aa23.56■■□□□ 1.36
CPSF7-204ENST00000413232 GRK4P32298 578 aa23.56■■□□□ 1.36
CPSF7-204ENST00000413232 RAET1EQ8TD07 263 aa23.56■■□□□ 1.36
CPSF7-204ENST00000413232 AGTPBP1Q9UPW5 1226 aa23.56■■□□□ 1.36
CPSF7-204ENST00000413232 NDUFB9Q9Y6M9 179 aa23.56■■□□□ 1.36
CPSF7-204ENST00000413232 FCGRTP55899 365 aa23.55■■□□□ 1.36
CPSF7-204ENST00000413232 SHROOM1Q2M3G4 852 aaPredicted RBP23.55■■□□□ 1.36
CPSF7-204ENST00000413232 MAPKAPK5Q8IW41 473 aa23.55■■□□□ 1.36
CPSF7-204ENST00000413232 SHISA4Q96DD7 197 aa23.55■■□□□ 1.36
CPSF7-204ENST00000413232 DNAJC18Q9H819 358 aa23.55■■□□□ 1.36
CPSF7-204ENST00000413232 ZBED9Q6R2W3 1325 aa23.55■■□□□ 1.36
CPSF7-204ENST00000413232 DYNLL1P63167 89 aaKnown RBP23.54■■□□□ 1.36
CPSF7-204ENST00000413232 ZNF280CQ8ND82 737 aa23.54■■□□□ 1.36
CPSF7-204ENST00000413232 PI4KBQ9UBF8 816 aa23.54■■□□□ 1.36
CPSF7-204ENST00000413232 EXOC6BQ9Y2D4 811 aa23.54■■□□□ 1.36
CPSF7-204ENST00000413232 FLT1P17948 1338 aa23.54■■□□□ 1.36
CPSF7-204ENST00000413232 BAG3O95817 575 aa23.53■■□□□ 1.36
CPSF7-204ENST00000413232 HMGCS2P54868 508 aa23.53■■□□□ 1.36
CPSF7-204ENST00000413232 ANKRD13CQ8N6S4 541 aa23.53■■□□□ 1.36
CPSF7-204ENST00000413232 NOL10Q9BSC4 688 aaKnown RBP23.53■■□□□ 1.36
CPSF7-204ENST00000413232 HERC5Q9UII4 1024 aaKnown RBP23.53■■□□□ 1.36
CPSF7-204ENST00000413232 PALD1Q9ULE6 856 aa23.53■■□□□ 1.36
CPSF7-204ENST00000413232 METTL16Q86W50 562 aaKnown RBP23.52■■□□□ 1.36
CPSF7-204ENST00000413232 SMCR8Q8TEV9 937 aaPredicted RBP23.52■■□□□ 1.36
CPSF7-204ENST00000413232 ANTXR1Q9H6X2 564 aa23.52■■□□□ 1.36
CPSF7-204ENST00000413232 USP17L5A8MUK1 530 aa23.51■■□□□ 1.35
CPSF7-204ENST00000413232 CCL5P13501 91 aa23.51■■□□□ 1.35
CPSF7-204ENST00000413232 PLCG2P16885 1265 aa23.51■■□□□ 1.35
CPSF7-204ENST00000413232 FLT3LGP49771 235 aa23.51■■□□□ 1.35
CPSF7-204ENST00000413232 PROCA1Q8NCQ7 364 aaPredicted RBP23.51■■□□□ 1.35
CPSF7-204ENST00000413232 DHX36Q9H2U1 1008 aaKnown RBP23.51■■□□□ 1.35
CPSF7-204ENST00000413232 SAP30BPQ9UHR5 308 aaKnown RBP23.51■■□□□ 1.35
CPSF7-204ENST00000413232 CYP7A1P22680 504 aa23.5■■□□□ 1.35
CPSF7-204ENST00000413232 IDH1O75874 414 aaKnown RBP23.49■■□□□ 1.35
CPSF7-204ENST00000413232 ELNP15502 786 aa23.49■■□□□ 1.35
CPSF7-204ENST00000413232 SH3D19Q5HYK7 790 aa23.49■■□□□ 1.35
CPSF7-204ENST00000413232 MIGA1Q8NAN2 632 aa23.49■■□□□ 1.35
CPSF7-204ENST00000413232 BIN2Q9UBW5 565 aaPredicted RBP23.49■■□□□ 1.35
CPSF7-204ENST00000413232 PLXNB2O15031 1838 aa23.48■■□□□ 1.35
CPSF7-204ENST00000413232 TNPO2O14787 897 aaKnown RBP23.48■■□□□ 1.35
CPSF7-204ENST00000413232 ADCY3O60266 1144 aa23.48■■□□□ 1.35
CPSF7-204ENST00000413232 AACSQ86V21 672 aa23.48■■□□□ 1.35
CPSF7-204ENST00000413232 FOXP4Q8IVH2 680 aaPredicted RBP23.48■■□□□ 1.35
CPSF7-204ENST00000413232 MAGEB6Q8N7X4 407 aa23.48■■□□□ 1.35
CPSF7-204ENST00000413232 RNF208Q9H0X6 261 aa23.48■■□□□ 1.35
CPSF7-204ENST00000413232 UNC93B1Q9H1C4 597 aa23.48■■□□□ 1.35
CPSF7-204ENST00000413232 ASCC2Q9H1I8 757 aaPredicted RBP23.48■■□□□ 1.35
CPSF7-204ENST00000413232 IL1RAPL2Q9NP60 686 aa23.48■■□□□ 1.35
CPSF7-204ENST00000413232 GDF11O95390 407 aa23.47■■□□□ 1.35
CPSF7-204ENST00000413232 GJB1P08034 283 aa23.47■■□□□ 1.35
CPSF7-204ENST00000413232 GJA8P48165 433 aa23.47■■□□□ 1.35
CPSF7-204ENST00000413232 MTMR2Q13614 643 aa23.47■■□□□ 1.35
CPSF7-204ENST00000413232 FAM110CQ1W6H9 321 aa23.47■■□□□ 1.35
CPSF7-204ENST00000413232 SLAIN1Q8ND83 568 aa23.47■■□□□ 1.35
CPSF7-204ENST00000413232 WDR18Q9BV38 432 aa23.47■■□□□ 1.35
CPSF7-204ENST00000413232 TBC1D2Q9BYX2 928 aa23.47■■□□□ 1.35
CPSF7-204ENST00000413232 PEX10O60683 326 aa23.46■■□□□ 1.35
CPSF7-204ENST00000413232 HABP4Q5JVS0 413 aaKnown RBP23.46■■□□□ 1.35
CPSF7-204ENST00000413232 UBE2Q1Q7Z7E8 422 aa23.46■■□□□ 1.35
CPSF7-204ENST00000413232 SIRT2Q8IXJ6 389 aa23.46■■□□□ 1.35
CPSF7-204ENST00000413232 PNMA3Q9UL41 463 aa23.46■■□□□ 1.35
CPSF7-204ENST00000413232 IGSF3O75054 1194 aa23.45■■□□□ 1.34
CPSF7-204ENST00000413232 ASNSP08243 561 aa23.45■■□□□ 1.34
CPSF7-204ENST00000413232 BACE1P56817 501 aa23.45■■□□□ 1.34
CPSF7-204ENST00000413232 IRF5Q13568 498 aa23.45■■□□□ 1.34
CPSF7-204ENST00000413232 CRACR2BQ8N4Y2 399 aaPredicted RBP23.45■■□□□ 1.34
CPSF7-204ENST00000413232 RHPN1Q8TCX5 695 aa23.45■■□□□ 1.34
CPSF7-204ENST00000413232 GCC1Q96CN9 775 aa23.45■■□□□ 1.34
CPSF7-204ENST00000413232 AS3MTQ9HBK9 375 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms