RNA–Protein interactions for RNA: ENST00000412309.6

MS4A6A-201, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 2 BASIC

Gene MS4A6A, Length 1,284 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-201ENST00000412309 CHD4Q14839 1912 aa10.68□□□□□ -0.7
MS4A6A-201ENST00000412309 SNRPA1P09661 255 aaKnown RBP10.67□□□□□ -0.7
MS4A6A-201ENST00000412309 IL6STP40189 918 aaPredicted RBP10.67□□□□□ -0.7
MS4A6A-201ENST00000412309 TMPOP42166 694 aaKnown RBP10.67□□□□□ -0.7
MS4A6A-201ENST00000412309 EIF5P55010 431 aaKnown RBP10.67□□□□□ -0.7
MS4A6A-201ENST00000412309 OGFOD1Q8N543 542 aa10.67□□□□□ -0.7
MS4A6A-201ENST00000412309 RUNDC1Q96C34 613 aa10.67□□□□□ -0.7
MS4A6A-201ENST00000412309 PLVAPQ9BX97 442 aa10.67□□□□□ -0.7
MS4A6A-201ENST00000412309 BABAM1Q9NWV8 329 aa10.67□□□□□ -0.7
MS4A6A-201ENST00000412309 MKRN1Q9UHC7 482 aaKnown RBP10.67□□□□□ -0.7
MS4A6A-201ENST00000412309 NARFQ9UHQ1 456 aa10.67□□□□□ -0.7
MS4A6A-201ENST00000412309 AFDNP55196 1824 aaKnown RBP10.66□□□□□ -0.7
MS4A6A-201ENST00000412309 A0A087WZG4 1122 aa10.66□□□□□ -0.7
MS4A6A-201ENST00000412309 M0R2N6 131 aa10.66□□□□□ -0.7
MS4A6A-201ENST00000412309 KCNQ3O43525 872 aa10.66□□□□□ -0.7
MS4A6A-201ENST00000412309 SIN3BO75182 1162 aa10.66□□□□□ -0.7
MS4A6A-201ENST00000412309 DKK1O94907 266 aa10.66□□□□□ -0.7
MS4A6A-201ENST00000412309 HIRAP54198 1017 aaPredicted RBP10.66□□□□□ -0.7
MS4A6A-201ENST00000412309 C1orf53Q5VUE5 145 aa10.66□□□□□ -0.7
MS4A6A-201ENST00000412309 LARGE2Q8N3Y3 721 aa10.66□□□□□ -0.7
MS4A6A-201ENST00000412309 NLGN2Q8NFZ4 835 aa10.66□□□□□ -0.7
MS4A6A-201ENST00000412309 SRP68Q9UHB9 627 aaKnown RBP10.66□□□□□ -0.7
MS4A6A-201ENST00000412309 HCN4Q9Y3Q4 1203 aa10.66□□□□□ -0.7
MS4A6A-201ENST00000412309 DLEC1Q9Y238 1755 aa10.66□□□□□ -0.7
MS4A6A-201ENST00000412309 ADARB2-AS1A8MUL3 147 aa10.65□□□□□ -0.7
MS4A6A-201ENST00000412309 RIPK4P57078 832 aa10.65□□□□□ -0.7
MS4A6A-201ENST00000412309 SIX5Q8N196 739 aa10.65□□□□□ -0.7
MS4A6A-201ENST00000412309 HSH2DQ96JZ2 352 aa10.65□□□□□ -0.7
MS4A6A-201ENST00000412309 THUMPD2Q9BTF0 503 aaKnown RBP10.65□□□□□ -0.7
MS4A6A-201ENST00000412309 PHACTR1Q9C0D0 580 aa10.65□□□□□ -0.7
MS4A6A-201ENST00000412309 PALM3A6NDB9 673 aaPredicted RBP10.64□□□□□ -0.71
MS4A6A-201ENST00000412309 ANP32CO43423 234 aa10.64□□□□□ -0.71
MS4A6A-201ENST00000412309 ALAS2P22557 587 aa10.64□□□□□ -0.71
MS4A6A-201ENST00000412309 CANXP27824 592 aaKnown RBP10.64□□□□□ -0.71
MS4A6A-201ENST00000412309 EIF4A1P60842 406 aaKnown RBP10.64□□□□□ -0.71
MS4A6A-201ENST00000412309 DDR1Q08345 913 aa10.64□□□□□ -0.71
MS4A6A-201ENST00000412309 XP32Q5T750 250 aa10.64□□□□□ -0.71
MS4A6A-201ENST00000412309 CCDC146Q8IYE0 955 aa10.64□□□□□ -0.71
MS4A6A-201ENST00000412309 TSEN2Q8NCE0 465 aaKnown RBP10.64□□□□□ -0.71
MS4A6A-201ENST00000412309 CARMIL3Q8ND23 1372 aa10.64□□□□□ -0.71
MS4A6A-201ENST00000412309 ARFGEF1Q9Y6D6 1849 aa10.63□□□□□ -0.71
MS4A6A-201ENST00000412309 N4BP2Q86UW6 1770 aaPredicted RBP10.63□□□□□ -0.71
MS4A6A-201ENST00000412309 SFI1A8K8P3 1242 aa10.63□□□□□ -0.71
MS4A6A-201ENST00000412309 POLRMTO00411 1230 aaKnown RBP10.63□□□□□ -0.71
MS4A6A-201ENST00000412309 USPL1Q5W0Q7 1092 aa10.63□□□□□ -0.71
MS4A6A-201ENST00000412309 TNFRSF25Q93038 417 aa10.63□□□□□ -0.71
MS4A6A-201ENST00000412309 ZNF594Q96JF6 807 aaPredicted RBP10.63□□□□□ -0.71
MS4A6A-201ENST00000412309 PRAMEF22A3QJZ6 481 aa10.62□□□□□ -0.71
MS4A6A-201ENST00000412309 C21orf2O43822 256 aa10.62□□□□□ -0.71
MS4A6A-201ENST00000412309 SPEM2Q0P670 501 aa10.62□□□□□ -0.71
MS4A6A-201ENST00000412309 ZNF280CQ8ND82 737 aa10.62□□□□□ -0.71
MS4A6A-201ENST00000412309 BRD7Q9NPI1 651 aa10.62□□□□□ -0.71
MS4A6A-201ENST00000412309 TSPYL4Q9UJ04 414 aa10.62□□□□□ -0.71
MS4A6A-201ENST00000412309 RRP7AQ9Y3A4 280 aaKnown RBP10.62□□□□□ -0.71
MS4A6A-201ENST00000412309 CHMP3Q9Y3E7 222 aa10.62□□□□□ -0.71
MS4A6A-201ENST00000412309 STARD13Q9Y3M8 1113 aa10.62□□□□□ -0.71
MS4A6A-201ENST00000412309 USP16Q9Y5T5 823 aa10.62□□□□□ -0.71
MS4A6A-201ENST00000412309 ANKRD31Q8N7Z5 1873 aa10.61□□□□□ -0.71
MS4A6A-201ENST00000412309 COL11A2P13942 1736 aaPredicted RBP10.61□□□□□ -0.71
MS4A6A-201ENST00000412309 ATP10DQ9P241 1426 aa10.61□□□□□ -0.71
MS4A6A-201ENST00000412309 CAMTA2O94983 1202 aa10.61□□□□□ -0.71
MS4A6A-201ENST00000412309 A1BGP04217 495 aa10.61□□□□□ -0.71
MS4A6A-201ENST00000412309 SPATA31C1P0DKV0 1188 aa10.61□□□□□ -0.71
MS4A6A-201ENST00000412309 YBX3P16989 372 aaKnown RBP eCLIP10.61□□□□□ -0.71
MS4A6A-201ENST00000412309 TM4SF1P30408 202 aa10.61□□□□□ -0.71
MS4A6A-201ENST00000412309 TGFB2P61812 414 aa10.61□□□□□ -0.71
MS4A6A-201ENST00000412309 COL9A3Q14050 684 aaPredicted RBP10.61□□□□□ -0.71
MS4A6A-201ENST00000412309 NFIXQ14938 502 aa10.61□□□□□ -0.71
MS4A6A-201ENST00000412309 RAB44Q7Z6P3 723 aaPredicted RBP10.61□□□□□ -0.71
MS4A6A-201ENST00000412309 NPM2Q86SE8 214 aaKnown RBP10.61□□□□□ -0.71
MS4A6A-201ENST00000412309 CEP63Q96MT8 703 aa10.61□□□□□ -0.71
MS4A6A-201ENST00000412309 MIS18AQ9NYP9 233 aa10.61□□□□□ -0.71
MS4A6A-201ENST00000412309 CHL1O00533 1208 aa10.6□□□□□ -0.71
MS4A6A-201ENST00000412309 PPP1R12BO60237 982 aaPredicted RBP10.6□□□□□ -0.71
MS4A6A-201ENST00000412309 GRIN3BO60391 1043 aa10.6□□□□□ -0.71
MS4A6A-201ENST00000412309 HOXB7P09629 217 aa10.6□□□□□ -0.71
MS4A6A-201ENST00000412309 CALD1Q05682 793 aaKnown RBP10.6□□□□□ -0.71
MS4A6A-201ENST00000412309 TYRO3Q06418 890 aa10.6□□□□□ -0.71
MS4A6A-201ENST00000412309 GPR162Q16538 588 aa10.6□□□□□ -0.71
MS4A6A-201ENST00000412309 CLEC4GQ6UXB4 293 aa10.6□□□□□ -0.71
MS4A6A-201ENST00000412309 SUSD3Q96L08 255 aa10.6□□□□□ -0.71
MS4A6A-201ENST00000412309 MRS2Q9HD23 443 aa10.6□□□□□ -0.71
MS4A6A-201ENST00000412309 ANKIB1Q9P2G1 1089 aa10.6□□□□□ -0.71
MS4A6A-201ENST00000412309 ZNF652Q9Y2D9 606 aa10.6□□□□□ -0.71
MS4A6A-201ENST00000412309 IBTKQ9P2D0 1353 aaPredicted RBP10.6□□□□□ -0.71
MS4A6A-201ENST00000412309 M0R082 166 aa10.59□□□□□ -0.71
MS4A6A-201ENST00000412309 APAF1O14727 1248 aa10.59□□□□□ -0.71
MS4A6A-201ENST00000412309 ALBP02768 609 aa10.59□□□□□ -0.71
MS4A6A-201ENST00000412309 CCDC184Q52MB2 194 aa10.59□□□□□ -0.71
MS4A6A-201ENST00000412309 ZNF417Q8TAU3 575 aa10.59□□□□□ -0.71
MS4A6A-201ENST00000412309 ZNF587Q96SQ5 575 aaPredicted RBP10.59□□□□□ -0.71
MS4A6A-201ENST00000412309 ANKRD36CQ5JPF3 1778 aa10.59□□□□□ -0.71
MS4A6A-201ENST00000412309 ARFGEF2Q9Y6D5 1785 aa10.59□□□□□ -0.71
MS4A6A-201ENST00000412309 RIC1Q4ADV7 1423 aa10.58□□□□□ -0.72
MS4A6A-201ENST00000412309 NUP98P52948 1817 aa10.58□□□□□ -0.72
MS4A6A-201ENST00000412309 ADCY9O60503 1353 aa10.58□□□□□ -0.72
MS4A6A-201ENST00000412309 DOC2BQ14184 412 aa10.58□□□□□ -0.72
MS4A6A-201ENST00000412309 CCDC27Q2M243 656 aa10.58□□□□□ -0.72
MS4A6A-201ENST00000412309 C8orf86Q6ZUL3 223 aa10.58□□□□□ -0.72
MS4A6A-201ENST00000412309 CLUAP1Q96AJ1 413 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms