RNA–Protein interactions for RNA: ENST00000412237.6

LYRM2-201, Transcript of LYR motif containing 2, humanhuman

TSL 1 (best)

Gene LYRM2, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM2-201ENST00000412237 COL4A5P29400 1685 aa13.25□□□□□ -0.29
LYRM2-201ENST00000412237 PRDM1O75626 825 aa13.25□□□□□ -0.29
LYRM2-201ENST00000412237 IARSP41252 1262 aaKnown RBP13.25□□□□□ -0.29
LYRM2-201ENST00000412237 CRKP46108 304 aa13.25□□□□□ -0.29
LYRM2-201ENST00000412237 CCT2P78371 535 aaKnown RBP13.25□□□□□ -0.29
LYRM2-201ENST00000412237 HSP90AA2PQ14568 343 aaPredicted RBP13.25□□□□□ -0.29
LYRM2-201ENST00000412237 IGDCC4Q8TDY8 1250 aa13.25□□□□□ -0.29
LYRM2-201ENST00000412237 ESR2Q92731 530 aa13.25□□□□□ -0.29
LYRM2-201ENST00000412237 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.25□□□□□ -0.29
LYRM2-201ENST00000412237 GOLGA8BA8MQT2 603 aa13.25□□□□□ -0.29
LYRM2-201ENST00000412237 POLR3DP05423 398 aaPredicted RBP13.25□□□□□ -0.29
LYRM2-201ENST00000412237 TPM2P07951 284 aa13.25□□□□□ -0.29
LYRM2-201ENST00000412237 FGRP09769 529 aa13.25□□□□□ -0.29
LYRM2-201ENST00000412237 PCP11498 1178 aaKnown RBP13.25□□□□□ -0.29
LYRM2-201ENST00000412237 FOXD4L5Q5VV16 416 aaPredicted RBP13.25□□□□□ -0.29
LYRM2-201ENST00000412237 AMOTL1Q8IY63 956 aa13.25□□□□□ -0.29
LYRM2-201ENST00000412237 FOXD4L4Q8WXT5 416 aaPredicted RBP13.25□□□□□ -0.29
LYRM2-201ENST00000412237 PKNOX2Q96KN3 472 aa13.25□□□□□ -0.29
LYRM2-201ENST00000412237 ZKSCAN3Q9BRR0 538 aa13.25□□□□□ -0.29
LYRM2-201ENST00000412237 LY9Q9HBG7 655 aa13.25□□□□□ -0.29
LYRM2-201ENST00000412237 SENP2Q9HC62 589 aa13.25□□□□□ -0.29
LYRM2-201ENST00000412237 NCOA5Q9HCD5 579 aaKnown RBP13.25□□□□□ -0.29
LYRM2-201ENST00000412237 USP40Q9NVE5 1235 aa13.25□□□□□ -0.29
LYRM2-201ENST00000412237 FLT1P17948 1338 aa13.24□□□□□ -0.29
LYRM2-201ENST00000412237 ORC4O43929 436 aa13.24□□□□□ -0.29
LYRM2-201ENST00000412237 RANBP6O60518 1105 aaKnown RBP13.24□□□□□ -0.29
LYRM2-201ENST00000412237 RAD17O75943 681 aa13.24□□□□□ -0.29
LYRM2-201ENST00000412237 MBD3O95983 291 aa13.24□□□□□ -0.29
LYRM2-201ENST00000412237 NFXL1Q6ZNB6 911 aa13.24□□□□□ -0.29
LYRM2-201ENST00000412237 RAB11FIP4Q86YS3 637 aa13.24□□□□□ -0.29
LYRM2-201ENST00000412237 NIM1KQ8IY84 436 aa13.24□□□□□ -0.29
LYRM2-201ENST00000412237 NLGN2Q8NFZ4 835 aa13.24□□□□□ -0.29
LYRM2-201ENST00000412237 MRIQ9BWK5 157 aa13.24□□□□□ -0.29
LYRM2-201ENST00000412237 TAOK3Q9H2K8 898 aa13.24□□□□□ -0.29
LYRM2-201ENST00000412237 SPON1Q9HCB6 807 aa13.24□□□□□ -0.29
LYRM2-201ENST00000412237 PSME4Q14997 1843 aa13.24□□□□□ -0.29
LYRM2-201ENST00000412237 FER1L6Q2WGJ9 1857 aa13.24□□□□□ -0.29
LYRM2-201ENST00000412237 JAK2O60674 1132 aa13.23□□□□□ -0.29
LYRM2-201ENST00000412237 BRD1O95696 1058 aa13.23□□□□□ -0.29
LYRM2-201ENST00000412237 HDLBPQ00341 1268 aaKnown RBP13.23□□□□□ -0.29
LYRM2-201ENST00000412237 PDE4BQ07343 736 aa13.23□□□□□ -0.29
LYRM2-201ENST00000412237 SART3Q15020 963 aaKnown RBP13.23□□□□□ -0.29
LYRM2-201ENST00000412237 ZSCAN23Q3MJ62 389 aa13.23□□□□□ -0.29
LYRM2-201ENST00000412237 HS1BP3Q53T59 392 aa13.23□□□□□ -0.29
LYRM2-201ENST00000412237 APOBEC3HQ6NTF7 200 aaKnown RBP13.23□□□□□ -0.29
LYRM2-201ENST00000412237 CDC42EP5Q6NZY7 148 aa13.23□□□□□ -0.29
LYRM2-201ENST00000412237 DYNLL2Q96FJ2 89 aa13.23□□□□□ -0.29
LYRM2-201ENST00000412237 ZDHHC15Q96MV8 337 aa13.23□□□□□ -0.29
LYRM2-201ENST00000412237 ZNRF3Q9ULT6 936 aa13.23□□□□□ -0.29
LYRM2-201ENST00000412237 HPS5Q9UPZ3 1129 aa13.23□□□□□ -0.29
LYRM2-201ENST00000412237 PCDHAC2Q9Y5I4 1007 aa13.23□□□□□ -0.29
LYRM2-201ENST00000412237 FOCADQ5VW36 1801 aa13.23□□□□□ -0.29
LYRM2-201ENST00000412237 NFKBIEO00221 500 aa13.23□□□□□ -0.29
LYRM2-201ENST00000412237 SYT1P21579 422 aa13.23□□□□□ -0.29
LYRM2-201ENST00000412237 LIFRP42702 1097 aa13.23□□□□□ -0.29
LYRM2-201ENST00000412237 RBM5P52756 815 aaKnown RBP eCLIP13.23□□□□□ -0.29
LYRM2-201ENST00000412237 PICALMQ13492 652 aa13.23□□□□□ -0.29
LYRM2-201ENST00000412237 WTAPQ15007 396 aa13.23□□□□□ -0.29
LYRM2-201ENST00000412237 LLPHQ9BRT6 129 aaKnown RBP13.23□□□□□ -0.29
LYRM2-201ENST00000412237 UBAC1Q9BSL1 405 aa13.23□□□□□ -0.29
LYRM2-201ENST00000412237 MTA3Q9BTC8 594 aa13.23□□□□□ -0.29
LYRM2-201ENST00000412237 ROBO3Q96MS0 1386 aa13.22□□□□□ -0.29
LYRM2-201ENST00000412237 DDX60LQ5H9U9 1706 aaKnown RBP13.22□□□□□ -0.29
LYRM2-201ENST00000412237 MYH1P12882 1939 aa13.22□□□□□ -0.29
LYRM2-201ENST00000412237 ERICH2A1L162 156 aa13.22□□□□□ -0.29
LYRM2-201ENST00000412237 CCDC69A6NI79 296 aa13.22□□□□□ -0.29
LYRM2-201ENST00000412237 PSMD14O00487 310 aa13.22□□□□□ -0.29
LYRM2-201ENST00000412237 WDHD1O75717 1129 aaPredicted RBP13.22□□□□□ -0.29
LYRM2-201ENST00000412237 CTDNEP1O95476 244 aa13.22□□□□□ -0.29
LYRM2-201ENST00000412237 PLCD1P51178 756 aa13.22□□□□□ -0.29
LYRM2-201ENST00000412237 CAVIN1Q6NZI2 390 aaKnown RBP13.22□□□□□ -0.29
LYRM2-201ENST00000412237 RSBN1LQ6PCB5 846 aaPredicted RBP13.22□□□□□ -0.29
LYRM2-201ENST00000412237 SGMS1Q86VZ5 419 aa13.22□□□□□ -0.29
LYRM2-201ENST00000412237 NSUN7Q8NE18 718 aaKnown RBP13.22□□□□□ -0.29
LYRM2-201ENST00000412237 CHMP4CQ96CF2 233 aa13.22□□□□□ -0.29
LYRM2-201ENST00000412237 DDX4Q9NQI0 724 aaKnown RBP13.22□□□□□ -0.29
LYRM2-201ENST00000412237 WDR33Q9C0J8 1336 aaKnown RBP13.22□□□□□ -0.29
LYRM2-201ENST00000412237 STX6O43752 255 aa13.21□□□□□ -0.29
LYRM2-201ENST00000412237 VIL1P09327 827 aaKnown RBP13.21□□□□□ -0.29
LYRM2-201ENST00000412237 FAM47AQ5JRC9 791 aa13.21□□□□□ -0.29
LYRM2-201ENST00000412237 APOA5Q6Q788 366 aa13.21□□□□□ -0.29
LYRM2-201ENST00000412237 SMARCC2Q8TAQ2 1214 aa13.21□□□□□ -0.29
LYRM2-201ENST00000412237 DDX11Q96FC9 970 aa13.21□□□□□ -0.29
LYRM2-201ENST00000412237 SERPINA10Q9UK55 444 aa13.21□□□□□ -0.29
LYRM2-201ENST00000412237 TNKSO95271 1327 aa13.21□□□□□ -0.29
LYRM2-201ENST00000412237 MYO3BQ8WXR4 1341 aa13.21□□□□□ -0.29
LYRM2-201ENST00000412237 SEC23AQ15436 765 aa13.21□□□□□ -0.3
LYRM2-201ENST00000412237 SLC44A5Q8NCS7 719 aa13.21□□□□□ -0.3
LYRM2-201ENST00000412237 ZSCAN10Q96SZ4 725 aaPredicted RBP13.21□□□□□ -0.3
LYRM2-201ENST00000412237 MKNK2Q9HBH9 465 aa13.21□□□□□ -0.3
LYRM2-201ENST00000412237 SLC12A7Q9Y666 1083 aa13.21□□□□□ -0.3
LYRM2-201ENST00000412237 ECM29Q5VYK3 1845 aa13.2□□□□□ -0.3
LYRM2-201ENST00000412237 PTPDC1A2A3K4 754 aa13.2□□□□□ -0.3
LYRM2-201ENST00000412237 ZBTB43O43298 467 aa13.2□□□□□ -0.3
LYRM2-201ENST00000412237 NCLP19338 710 aaKnown RBP13.2□□□□□ -0.3
LYRM2-201ENST00000412237 RXRAP19793 462 aa13.2□□□□□ -0.3
LYRM2-201ENST00000412237 METAP2P50579 478 aaKnown RBP eCLIP13.2□□□□□ -0.3
LYRM2-201ENST00000412237 RASSF7Q02833 373 aa13.2□□□□□ -0.3
LYRM2-201ENST00000412237 CFAP100Q494V2 611 aa13.2□□□□□ -0.3
LYRM2-201ENST00000412237 LARP1BQ659C4 914 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms