RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 USP40Q9NVE5 1235 aa13.65□□□□□ -0.22
SNRNP35-202ENST00000412157 MKRN1Q9UHC7 482 aaKnown RBP13.65□□□□□ -0.22
SNRNP35-202ENST00000412157 SERPINA10Q9UK55 444 aa13.65□□□□□ -0.22
SNRNP35-202ENST00000412157 CCDC69A6NI79 296 aa13.64□□□□□ -0.23
SNRNP35-202ENST00000412157 GOLGA8BA8MQT2 603 aa13.64□□□□□ -0.23
SNRNP35-202ENST00000412157 ORC4O43929 436 aa13.64□□□□□ -0.23
SNRNP35-202ENST00000412157 RAD17O75943 681 aa13.64□□□□□ -0.23
SNRNP35-202ENST00000412157 GJB2P29033 226 aa13.64□□□□□ -0.23
SNRNP35-202ENST00000412157 EVCP57679 992 aa13.64□□□□□ -0.23
SNRNP35-202ENST00000412157 ST3GAL1Q11201 340 aa13.64□□□□□ -0.23
SNRNP35-202ENST00000412157 WTAPQ15007 396 aa13.64□□□□□ -0.23
SNRNP35-202ENST00000412157 C9orf131Q5VYM1 1079 aa13.64□□□□□ -0.23
SNRNP35-202ENST00000412157 IQCA1Q86XH1 822 aa13.64□□□□□ -0.23
SNRNP35-202ENST00000412157 INCENPQ9NQS7 918 aa13.64□□□□□ -0.23
SNRNP35-202ENST00000412157 ZSWIM5Q9P217 1185 aa13.64□□□□□ -0.23
SNRNP35-202ENST00000412157 SAP30BPQ9UHR5 308 aaKnown RBP13.64□□□□□ -0.23
SNRNP35-202ENST00000412157 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.64□□□□□ -0.23
SNRNP35-202ENST00000412157 TACC3Q9Y6A5 838 aa13.64□□□□□ -0.23
SNRNP35-202ENST00000412157 NFKBIEO00221 500 aa13.63□□□□□ -0.23
SNRNP35-202ENST00000412157 PSMD14O00487 310 aa13.63□□□□□ -0.23
SNRNP35-202ENST00000412157 RANBP6O60518 1105 aaKnown RBP13.63□□□□□ -0.23
SNRNP35-202ENST00000412157 VIL1P09327 827 aaKnown RBP13.63□□□□□ -0.23
SNRNP35-202ENST00000412157 FGRP09769 529 aa13.63□□□□□ -0.23
SNRNP35-202ENST00000412157 LIFRP42702 1097 aa13.63□□□□□ -0.23
SNRNP35-202ENST00000412157 PICALMQ13492 652 aa13.63□□□□□ -0.23
SNRNP35-202ENST00000412157 CDC42EP5Q6NZY7 148 aa13.63□□□□□ -0.23
SNRNP35-202ENST00000412157 SYNE3Q6ZMZ3 975 aa13.63□□□□□ -0.23
SNRNP35-202ENST00000412157 LLPHQ9BRT6 129 aaKnown RBP13.63□□□□□ -0.23
SNRNP35-202ENST00000412157 KIF3AQ9Y496 699 aa13.63□□□□□ -0.23
SNRNP35-202ENST00000412157 SBF1O95248 1867 aa13.63□□□□□ -0.23
SNRNP35-202ENST00000412157 MYH15Q9Y2K3 1946 aa13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 TSPY2A6NKD2 308 aa13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 DHX16O60231 1041 aaKnown RBP13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 PDIA4P13667 645 aaKnown RBP13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 PDCP20941 246 aa13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 PDIA3P30101 505 aaKnown RBP13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 CCT2P78371 535 aaKnown RBP13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 HMGN5P82970 282 aaKnown RBP13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 HTRA3P83110 453 aa13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 SCRN1Q12765 414 aa13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 TNIP1Q15025 636 aa13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 SLC4A8Q2Y0W8 1093 aa13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 CFAP100Q494V2 611 aa13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 CIAPIN1Q6FI81 312 aa13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 APOBEC3HQ6NTF7 200 aaKnown RBP13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 TTC6Q86TZ1 520 aa13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 TMTC2Q8N394 836 aa13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 RBM46Q8TBY0 533 aaKnown RBP13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 IGDCC4Q8TDY8 1250 aa13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 GBP4Q96PP9 640 aa13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 LY9Q9HBG7 655 aa13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 MKNK2Q9HBH9 465 aa13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 GPHNQ9NQX3 736 aaPredicted RBP13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 TNKSO95271 1327 aa13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 WDR33Q9C0J8 1336 aaKnown RBP13.62□□□□□ -0.23
SNRNP35-202ENST00000412157 ZBTB43O43298 467 aa13.61□□□□□ -0.23
SNRNP35-202ENST00000412157 PRDM1O75626 825 aa13.61□□□□□ -0.23
SNRNP35-202ENST00000412157 CAPN15O75808 1086 aa13.61□□□□□ -0.23
SNRNP35-202ENST00000412157 HLA-DOAP06340 250 aa13.61□□□□□ -0.23
SNRNP35-202ENST00000412157 METAP2P50579 478 aaKnown RBP eCLIP13.61□□□□□ -0.23
SNRNP35-202ENST00000412157 RASSF7Q02833 373 aa13.61□□□□□ -0.23
SNRNP35-202ENST00000412157 NFKBIBQ15653 356 aa13.61□□□□□ -0.23
SNRNP35-202ENST00000412157 CPLX2Q6PUV4 134 aaKnown RBP13.61□□□□□ -0.23
SNRNP35-202ENST00000412157 SGMS1Q86VZ5 419 aa13.61□□□□□ -0.23
SNRNP35-202ENST00000412157 OGFOD1Q8N543 542 aa13.61□□□□□ -0.23
SNRNP35-202ENST00000412157 AGBL3Q8NEM8 1001 aa13.61□□□□□ -0.23
SNRNP35-202ENST00000412157 ZKSCAN3Q9BRR0 538 aa13.61□□□□□ -0.23
SNRNP35-202ENST00000412157 OSBPL5Q9H0X9 879 aaPredicted RBP13.61□□□□□ -0.23
SNRNP35-202ENST00000412157 TMOD2Q9NZR1 351 aa13.61□□□□□ -0.23
SNRNP35-202ENST00000412157 RNF181Q9P0P0 153 aa13.61□□□□□ -0.23
SNRNP35-202ENST00000412157 BRPF3Q9ULD4 1205 aa13.61□□□□□ -0.23
SNRNP35-202ENST00000412157 SLC12A7Q9Y666 1083 aa13.61□□□□□ -0.23
SNRNP35-202ENST00000412157 SIPA1L1O43166 1804 aa13.61□□□□□ -0.23
SNRNP35-202ENST00000412157 GOLGA8AA7E2F4 631 aa13.6□□□□□ -0.23
SNRNP35-202ENST00000412157 SMIM22K7EJ46 135 aa13.6□□□□□ -0.23
SNRNP35-202ENST00000412157 CPLX1O14810 134 aa13.6□□□□□ -0.23
SNRNP35-202ENST00000412157 WDHD1O75717 1129 aaPredicted RBP13.6□□□□□ -0.23
SNRNP35-202ENST00000412157 NBR1Q14596 966 aa13.6□□□□□ -0.23
SNRNP35-202ENST00000412157 CCDC178Q5BJE1 867 aa13.6□□□□□ -0.23
SNRNP35-202ENST00000412157 APOA5Q6Q788 366 aa13.6□□□□□ -0.23
SNRNP35-202ENST00000412157 C16orf86Q6ZW13 317 aa13.6□□□□□ -0.23
SNRNP35-202ENST00000412157 ZNF444Q8N0Y2 327 aaPredicted RBP13.6□□□□□ -0.23
SNRNP35-202ENST00000412157 DNAJC5GQ8N7S2 189 aa13.6□□□□□ -0.23
SNRNP35-202ENST00000412157 FAM184AQ8NB25 1140 aa13.6□□□□□ -0.23
SNRNP35-202ENST00000412157 NKX2-3Q8TAU0 364 aa13.6□□□□□ -0.23
SNRNP35-202ENST00000412157 TNPO1Q92973 898 aaKnown RBP13.6□□□□□ -0.23
SNRNP35-202ENST00000412157 DYNLL2Q96FJ2 89 aa13.6□□□□□ -0.23
SNRNP35-202ENST00000412157 ZSCAN10Q96SZ4 725 aaPredicted RBP13.6□□□□□ -0.23
SNRNP35-202ENST00000412157 TCHHQ07283 1943 aa13.59□□□□□ -0.23
SNRNP35-202ENST00000412157 MYH4Q9Y623 1939 aa13.59□□□□□ -0.23
SNRNP35-202ENST00000412157 PTPDC1A2A3K4 754 aa13.59□□□□□ -0.23
SNRNP35-202ENST00000412157 STX6O43752 255 aa13.59□□□□□ -0.23
SNRNP35-202ENST00000412157 CDKL5O76039 1030 aa13.59□□□□□ -0.23
SNRNP35-202ENST00000412157 BRD1O95696 1058 aa13.59□□□□□ -0.23
SNRNP35-202ENST00000412157 PLCD1P51178 756 aa13.59□□□□□ -0.23
SNRNP35-202ENST00000412157 EIF6P56537 245 aaKnown RBP13.59□□□□□ -0.23
SNRNP35-202ENST00000412157 EVX2Q03828 476 aa13.59□□□□□ -0.23
SNRNP35-202ENST00000412157 CXCL9Q07325 125 aa13.59□□□□□ -0.23
SNRNP35-202ENST00000412157 DLGAP5Q15398 846 aa13.59□□□□□ -0.23
SNRNP35-202ENST00000412157 IFIT1BQ5T764 474 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms