RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 KRT23Q9C075 422 aa22.12■■□□□ 1.13
CDC42-204ENST00000411827 GPBP1L1Q9HC44 474 aaPredicted RBP22.12■■□□□ 1.13
CDC42-204ENST00000411827 SAP30BPQ9UHR5 308 aaKnown RBP22.12■■□□□ 1.13
CDC42-204ENST00000411827 NAV1Q8NEY1 1877 aa22.11■■□□□ 1.13
CDC42-204ENST00000411827 CDK5RAP2Q96SN8 1893 aa22.11■■□□□ 1.13
CDC42-204ENST00000411827 ORC4O43929 436 aa22.11■■□□□ 1.13
CDC42-204ENST00000411827 KRT26Q7Z3Y9 468 aa22.11■■□□□ 1.13
CDC42-204ENST00000411827 CRACR2BQ8N4Y2 399 aaPredicted RBP22.11■■□□□ 1.13
CDC42-204ENST00000411827 MAP3K10Q02779 954 aa22.1■■□□□ 1.13
CDC42-204ENST00000411827 DDX60LQ5H9U9 1706 aaKnown RBP22.1■■□□□ 1.13
CDC42-204ENST00000411827 DCAF15Q66K64 600 aa22.1■■□□□ 1.13
CDC42-204ENST00000411827 C16orf86Q6ZW13 317 aa22.1■■□□□ 1.13
CDC42-204ENST00000411827 ZNF526Q8TF50 670 aaPredicted RBP22.1■■□□□ 1.13
CDC42-204ENST00000411827 CLEC11AQ9Y240 323 aa22.1■■□□□ 1.13
CDC42-204ENST00000411827 DDTLA6NHG4 134 aaPredicted RBP22.09■■□□□ 1.13
CDC42-204ENST00000411827 PLCD1P51178 756 aa22.09■■□□□ 1.13
CDC42-204ENST00000411827 GABPAQ06546 454 aa22.09■■□□□ 1.13
CDC42-204ENST00000411827 RALYLQ86SE5 291 aaKnown RBP22.09■■□□□ 1.13
CDC42-204ENST00000411827 ZFPM1Q8IX07 1006 aa22.09■■□□□ 1.13
CDC42-204ENST00000411827 NCOA7Q8NI08 942 aa22.09■■□□□ 1.13
CDC42-204ENST00000411827 CCDC17Q96LX7 622 aa22.09■■□□□ 1.13
CDC42-204ENST00000411827 TMEM39BQ9GZU3 492 aa22.09■■□□□ 1.13
CDC42-204ENST00000411827 MKNK2Q9HBH9 465 aa22.09■■□□□ 1.13
CDC42-204ENST00000411827 NMRK2Q9NPI5 230 aa22.09■■□□□ 1.13
CDC42-204ENST00000411827 SNX14Q9Y5W7 946 aa22.09■■□□□ 1.13
CDC42-204ENST00000411827 MYH1P12882 1939 aa22.09■■□□□ 1.13
CDC42-204ENST00000411827 ASTN2O75129 1339 aaPredicted RBP22.08■■□□□ 1.13
CDC42-204ENST00000411827 NF2P35240 595 aa22.08■■□□□ 1.13
CDC42-204ENST00000411827 HAND2P61296 217 aa22.08■■□□□ 1.13
CDC42-204ENST00000411827 SH3BP5LQ7L8J4 393 aa22.08■■□□□ 1.13
CDC42-204ENST00000411827 ESR2Q92731 530 aa22.08■■□□□ 1.13
CDC42-204ENST00000411827 TEPSINQ96N21 525 aa22.08■■□□□ 1.13
CDC42-204ENST00000411827 MTA3Q9BTC8 594 aa22.08■■□□□ 1.13
CDC42-204ENST00000411827 GINM1Q9NU53 330 aa22.08■■□□□ 1.13
CDC42-204ENST00000411827 LAMA4Q16363 1823 aa22.08■■□□□ 1.12
CDC42-204ENST00000411827 E7EWF7 191 aa22.07■■□□□ 1.12
CDC42-204ENST00000411827 CCDC178Q5BJE1 867 aa22.07■■□□□ 1.12
CDC42-204ENST00000411827 PPP4R3BQ5MIZ7 849 aa22.07■■□□□ 1.12
CDC42-204ENST00000411827 NEK1Q96PY6 1258 aa22.07■■□□□ 1.12
CDC42-204ENST00000411827 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.07■■□□□ 1.126e-6■□□□□ 11.2
CDC42-204ENST00000411827 WDR19Q8NEZ3 1342 aa22.06■■□□□ 1.12
CDC42-204ENST00000411827 BAZ2AQ9UIF9 1905 aaKnown RBP22.06■■□□□ 1.12
CDC42-204ENST00000411827 CYP2D6P10635 497 aa22.06■■□□□ 1.12
CDC42-204ENST00000411827 CDK8P49336 464 aa22.06■■□□□ 1.12
CDC42-204ENST00000411827 CTDSPL2Q05D32 466 aa22.06■■□□□ 1.12
CDC42-204ENST00000411827 RASEFQ8IZ41 740 aa22.06■■□□□ 1.12
CDC42-204ENST00000411827 ZNF444Q8N0Y2 327 aaPredicted RBP22.06■■□□□ 1.12
CDC42-204ENST00000411827 LAMB1P07942 1786 aa22.05■■□□□ 1.12
CDC42-204ENST00000411827 CYP2D7A0A087X1C5 515 aa22.05■■□□□ 1.12
CDC42-204ENST00000411827 RABEP1Q15276 862 aa22.05■■□□□ 1.12
CDC42-204ENST00000411827 CHADLQ6NUI6 762 aa22.05■■□□□ 1.12
CDC42-204ENST00000411827 TATDN1Q6P1N9 297 aa22.05■■□□□ 1.12
CDC42-204ENST00000411827 TBC1D10CQ8IV04 446 aa22.05■■□□□ 1.12
CDC42-204ENST00000411827 NBPF3Q9H094 633 aa22.05■■□□□ 1.12
CDC42-204ENST00000411827 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.05■■□□□ 1.12
CDC42-204ENST00000411827 MCM5P33992 734 aa22.04■■□□□ 1.12
CDC42-204ENST00000411827 BLOC1S2Q6QNY1 142 aa22.04■■□□□ 1.12
CDC42-204ENST00000411827 ZSWIM6Q9HCJ5 1215 aa22.04■■□□□ 1.12
CDC42-204ENST00000411827 CYP46A1Q9Y6A2 500 aa22.04■■□□□ 1.12
CDC42-204ENST00000411827 UNCXA6NJT0 531 aa22.03■■□□□ 1.12
CDC42-204ENST00000411827 PPP1R12BO60237 982 aaPredicted RBP22.03■■□□□ 1.12
CDC42-204ENST00000411827 SART3Q15020 963 aaKnown RBP22.03■■□□□ 1.12
CDC42-204ENST00000411827 DHX32Q7L7V1 743 aaKnown RBP22.03■■□□□ 1.12
CDC42-204ENST00000411827 USP48Q86UV5 1035 aa22.03■■□□□ 1.12
CDC42-204ENST00000411827 IQCA1Q86XH1 822 aa22.03■■□□□ 1.12
CDC42-204ENST00000411827 JAKMIP1Q96N16 626 aaKnown RBP22.03■■□□□ 1.12
CDC42-204ENST00000411827 ZNF341Q9BYN7 854 aa22.03■■□□□ 1.12
CDC42-204ENST00000411827 TOMM22Q9NS69 142 aa22.03■■□□□ 1.12
CDC42-204ENST00000411827 NBPF12Q5TAG4 269 aaPredicted RBP22.02■■□□□ 1.12
CDC42-204ENST00000411827 DYNLL2Q96FJ2 89 aa22.02■■□□□ 1.12
CDC42-204ENST00000411827 KIF3CO14782 793 aa22.01■■□□□ 1.11
CDC42-204ENST00000411827 RASA1P20936 1047 aa22.01■■□□□ 1.11
CDC42-204ENST00000411827 SHMT1P34896 483 aa22.01■■□□□ 1.11
CDC42-204ENST00000411827 FKBP1BP68106 108 aa22.01■■□□□ 1.11
CDC42-204ENST00000411827 CERKLQ49MI3 558 aaPredicted RBP22.01■■□□□ 1.11
CDC42-204ENST00000411827 RUFY3Q7L099 469 aa22.01■■□□□ 1.11
CDC42-204ENST00000411827 PIAS4Q8N2W9 510 aaPredicted RBP22.01■■□□□ 1.11
CDC42-204ENST00000411827 FBXL16Q8N461 479 aa22.01■■□□□ 1.11
CDC42-204ENST00000411827 TCP11L1Q9NUJ3 509 aa22.01■■□□□ 1.11
CDC42-204ENST00000411827 TSPY2A6NKD2 308 aa22■■□□□ 1.11
CDC42-204ENST00000411827 RANBP6O60518 1105 aaKnown RBP22■■□□□ 1.11
CDC42-204ENST00000411827 CTNND1O60716 968 aaKnown RBP22■■□□□ 1.11
CDC42-204ENST00000411827 TSPY3P0CV98 308 aa22■■□□□ 1.11
CDC42-204ENST00000411827 TSPY8P0CW00 308 aa22■■□□□ 1.11
CDC42-204ENST00000411827 CASTP20810 708 aaKnown RBP22■■□□□ 1.11
CDC42-204ENST00000411827 STOX1Q6ZVD7 989 aa22■■□□□ 1.11
CDC42-204ENST00000411827 TMTC2Q8N394 836 aa22■■□□□ 1.11
CDC42-204ENST00000411827 CDCA5Q96FF9 252 aa22■■□□□ 1.11
CDC42-204ENST00000411827 TMEM87BQ96K49 555 aa22■■□□□ 1.11
CDC42-204ENST00000411827 ALDH8A1Q9H2A2 487 aaPredicted RBP22■■□□□ 1.11
CDC42-204ENST00000411827 CABP5Q9NP86 173 aa22■■□□□ 1.11
CDC42-204ENST00000411827 PLIN4Q96Q06 1357 aa21.99■■□□□ 1.11
CDC42-204ENST00000411827 ERICH2A1L162 156 aa21.99■■□□□ 1.11
CDC42-204ENST00000411827 ADM5C9JUS6 153 aa21.99■■□□□ 1.11
CDC42-204ENST00000411827 RPS6KB1P23443 525 aa21.99■■□□□ 1.11
CDC42-204ENST00000411827 ANKRD1Q15327 319 aa21.99■■□□□ 1.11
CDC42-204ENST00000411827 SLC4A8Q2Y0W8 1093 aa21.99■■□□□ 1.11
CDC42-204ENST00000411827 ADCK5Q3MIX3 580 aa21.99■■□□□ 1.11
CDC42-204ENST00000411827 RRP12Q5JTH9 1297 aaKnown RBP21.99■■□□□ 1.11
CDC42-204ENST00000411827 MAP1SQ66K74 1059 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms