RNA–Protein interactions for RNA: ENST00000410704.1

RN7SKP54-201, Transcript of RNA, 7SK small nuclear pseudogene 54, humanhuman

BASIC

Gene RN7SKP54, Length 269 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP54-201ENST00000410704 NF2P35240 595 aa11.97□□□□□ -0.49
RN7SKP54-201ENST00000410704 ANAPC15P60006 121 aa11.97□□□□□ -0.49
RN7SKP54-201ENST00000410704 AKNAD1Q5T1N1 836 aa11.97□□□□□ -0.49
RN7SKP54-201ENST00000410704 SH3BP5LQ7L8J4 393 aa11.97□□□□□ -0.49
RN7SKP54-201ENST00000410704 USP48Q86UV5 1035 aa11.97□□□□□ -0.49
RN7SKP54-201ENST00000410704 STAG1Q8WVM7 1258 aa11.97□□□□□ -0.49
RN7SKP54-201ENST00000410704 KCNB2Q92953 911 aa11.97□□□□□ -0.49
RN7SKP54-201ENST00000410704 CNNM2Q9H8M5 875 aa11.97□□□□□ -0.49
RN7SKP54-201ENST00000410704 MKNK2Q9HBH9 465 aa11.97□□□□□ -0.49
RN7SKP54-201ENST00000410704 TOMM22Q9NS69 142 aa11.97□□□□□ -0.49
RN7SKP54-201ENST00000410704 SWAP70Q9UH65 585 aa11.97□□□□□ -0.49
RN7SKP54-201ENST00000410704 HERC5Q9UII4 1024 aaKnown RBP11.97□□□□□ -0.49
RN7SKP54-201ENST00000410704 MYH1P12882 1939 aa11.97□□□□□ -0.49
RN7SKP54-201ENST00000410704 BAZ2AQ9UIF9 1905 aaKnown RBP11.97□□□□□ -0.49
RN7SKP54-201ENST00000410704 LAMB1P07942 1786 aa11.97□□□□□ -0.49
RN7SKP54-201ENST00000410704 UTRNP46939 3433 aa11.96□□□□□ -0.49
RN7SKP54-201ENST00000410704 LAMA4Q16363 1823 aa11.96□□□□□ -0.49
RN7SKP54-201ENST00000410704 E7EWF7 191 aa11.96□□□□□ -0.49
RN7SKP54-201ENST00000410704 POTEIP0CG38 1075 aa11.96□□□□□ -0.49
RN7SKP54-201ENST00000410704 POTEJP0CG39 1038 aa11.96□□□□□ -0.49
RN7SKP54-201ENST00000410704 PSMA5P28066 241 aa11.96□□□□□ -0.49
RN7SKP54-201ENST00000410704 RBM25P49756 843 aaKnown RBP11.96□□□□□ -0.49
RN7SKP54-201ENST00000410704 TSGA10IPQ3SY00 556 aa11.96□□□□□ -0.49
RN7SKP54-201ENST00000410704 DCAF15Q66K64 600 aa11.96□□□□□ -0.49
RN7SKP54-201ENST00000410704 MAP1SQ66K74 1059 aaPredicted RBP11.96□□□□□ -0.49
RN7SKP54-201ENST00000410704 C16orf86Q6ZW13 317 aa11.96□□□□□ -0.49
RN7SKP54-201ENST00000410704 RALYLQ86SE5 291 aaKnown RBP11.96□□□□□ -0.49
RN7SKP54-201ENST00000410704 TBC1D10CQ8IV04 446 aa11.96□□□□□ -0.49
RN7SKP54-201ENST00000410704 DYNLL2Q96FJ2 89 aa11.96□□□□□ -0.49
RN7SKP54-201ENST00000410704 TEPSINQ96N21 525 aa11.96□□□□□ -0.49
RN7SKP54-201ENST00000410704 TBC1D32Q96NH3 1257 aa11.96□□□□□ -0.49
RN7SKP54-201ENST00000410704 GLIS2Q9BZE0 524 aaPredicted RBP11.96□□□□□ -0.49
RN7SKP54-201ENST00000410704 KRT23Q9C075 422 aa11.96□□□□□ -0.49
RN7SKP54-201ENST00000410704 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.96□□□□□ -0.49
RN7SKP54-201ENST00000410704 SNX14Q9Y5W7 946 aa11.96□□□□□ -0.49
RN7SKP54-201ENST00000410704 TBC1D12O60347 775 aa11.95□□□□□ -0.5
RN7SKP54-201ENST00000410704 HMGB1P09429 215 aaKnown RBP11.95□□□□□ -0.5
RN7SKP54-201ENST00000410704 CDK8P49336 464 aa11.95□□□□□ -0.5
RN7SKP54-201ENST00000410704 NT5C2P49902 561 aa11.95□□□□□ -0.5
RN7SKP54-201ENST00000410704 GABPAQ06546 454 aa11.95□□□□□ -0.5
RN7SKP54-201ENST00000410704 RRP12Q5JTH9 1297 aaKnown RBP11.95□□□□□ -0.5
RN7SKP54-201ENST00000410704 NBPF12Q5TAG4 269 aaPredicted RBP11.95□□□□□ -0.5
RN7SKP54-201ENST00000410704 CHADLQ6NUI6 762 aa11.95□□□□□ -0.5
RN7SKP54-201ENST00000410704 METTL16Q86W50 562 aaKnown RBP11.95□□□□□ -0.5
RN7SKP54-201ENST00000410704 RASEFQ8IZ41 740 aa11.95□□□□□ -0.5
RN7SKP54-201ENST00000410704 ZNF444Q8N0Y2 327 aaPredicted RBP11.95□□□□□ -0.5
RN7SKP54-201ENST00000410704 NCOA7Q8NI08 942 aa11.95□□□□□ -0.5
RN7SKP54-201ENST00000410704 JAKMIP1Q96N16 626 aaKnown RBP11.95□□□□□ -0.5
RN7SKP54-201ENST00000410704 NBPF3Q9H094 633 aa11.95□□□□□ -0.5
RN7SKP54-201ENST00000410704 ORC4O43929 436 aa11.94□□□□□ -0.5
RN7SKP54-201ENST00000410704 RANBP6O60518 1105 aaKnown RBP11.94□□□□□ -0.5
RN7SKP54-201ENST00000410704 EVX2Q03828 476 aa11.94□□□□□ -0.5
RN7SKP54-201ENST00000410704 PRAMEF18Q5VWM3 479 aa11.94□□□□□ -0.5
RN7SKP54-201ENST00000410704 MIGA2Q7L4E1 593 aa11.94□□□□□ -0.5
RN7SKP54-201ENST00000410704 CDAN1Q8IWY9 1227 aa11.94□□□□□ -0.5
RN7SKP54-201ENST00000410704 ESR2Q92731 530 aa11.94□□□□□ -0.5
RN7SKP54-201ENST00000410704 CDCA5Q96FF9 252 aa11.94□□□□□ -0.5
RN7SKP54-201ENST00000410704 NEK1Q96PY6 1258 aa11.94□□□□□ -0.5
RN7SKP54-201ENST00000410704 ZNF341Q9BYN7 854 aa11.94□□□□□ -0.5
RN7SKP54-201ENST00000410704 NEDD4P46934 1319 aa11.93□□□□□ -0.5
RN7SKP54-201ENST00000410704 TSPY2A6NKD2 308 aa11.93□□□□□ -0.5
RN7SKP54-201ENST00000410704 FAM196BA6NMK8 535 aa11.93□□□□□ -0.5
RN7SKP54-201ENST00000410704 B4E1Z4 1266 aa11.93□□□□□ -0.5
RN7SKP54-201ENST00000410704 SMIM22K7EJ46 135 aa11.93□□□□□ -0.5
RN7SKP54-201ENST00000410704 KIF3CO14782 793 aa11.93□□□□□ -0.5
RN7SKP54-201ENST00000410704 PPP1R12BO60237 982 aaPredicted RBP11.93□□□□□ -0.5
RN7SKP54-201ENST00000410704 PRDM1O75626 825 aa11.93□□□□□ -0.5
RN7SKP54-201ENST00000410704 FGRP09769 529 aa11.93□□□□□ -0.5
RN7SKP54-201ENST00000410704 MAP3K10Q02779 954 aa11.93□□□□□ -0.5
RN7SKP54-201ENST00000410704 CERKLQ49MI3 558 aaPredicted RBP11.93□□□□□ -0.5
RN7SKP54-201ENST00000410704 BLOC1S2Q6QNY1 142 aa11.93□□□□□ -0.5
RN7SKP54-201ENST00000410704 STOX1Q6ZVD7 989 aa11.93□□□□□ -0.5
RN7SKP54-201ENST00000410704 SLC44A5Q8NCS7 719 aa11.93□□□□□ -0.5
RN7SKP54-201ENST00000410704 CCDC17Q96LX7 622 aa11.93□□□□□ -0.5
RN7SKP54-201ENST00000410704 TM6SF1Q9BZW5 370 aa11.93□□□□□ -0.5
RN7SKP54-201ENST00000410704 INCENPQ9NQS7 918 aa11.93□□□□□ -0.5
RN7SKP54-201ENST00000410704 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.93□□□□□ -0.5
RN7SKP54-201ENST00000410704 TAF6LQ9Y6J9 622 aa11.93□□□□□ -0.5
RN7SKP54-201ENST00000410704 KDM4AO75164 1064 aa11.92□□□□□ -0.5
RN7SKP54-201ENST00000410704 TSPY3P0CV98 308 aa11.92□□□□□ -0.5
RN7SKP54-201ENST00000410704 TSPY8P0CW00 308 aa11.92□□□□□ -0.5
RN7SKP54-201ENST00000410704 CASTP20810 708 aaKnown RBP11.92□□□□□ -0.5
RN7SKP54-201ENST00000410704 MCM5P33992 734 aa11.92□□□□□ -0.5
RN7SKP54-201ENST00000410704 SHMT1P34896 483 aa11.92□□□□□ -0.5
RN7SKP54-201ENST00000410704 TTLL12Q14166 644 aaPredicted RBP11.92□□□□□ -0.5
RN7SKP54-201ENST00000410704 ADCK5Q3MIX3 580 aa11.92□□□□□ -0.5
RN7SKP54-201ENST00000410704 TATDN1Q6P1N9 297 aa11.92□□□□□ -0.5
RN7SKP54-201ENST00000410704 ZNF784Q8NCA9 323 aaPredicted RBP11.92□□□□□ -0.5
RN7SKP54-201ENST00000410704 SMC1BQ8NDV3 1235 aa11.92□□□□□ -0.5
RN7SKP54-201ENST00000410704 IL17RAQ96F46 866 aa11.92□□□□□ -0.5
RN7SKP54-201ENST00000410704 DNAJC18Q9H819 358 aa11.92□□□□□ -0.5
RN7SKP54-201ENST00000410704 ZNF408Q9H9D4 720 aa11.92□□□□□ -0.5
RN7SKP54-201ENST00000410704 CABP5Q9NP86 173 aa11.92□□□□□ -0.5
RN7SKP54-201ENST00000410704 CYP46A1Q9Y6A2 500 aa11.92□□□□□ -0.5
RN7SKP54-201ENST00000410704 TRAF5O00463 557 aa11.91□□□□□ -0.5
RN7SKP54-201ENST00000410704 MPHOSPH10O00566 681 aaKnown RBP11.91□□□□□ -0.5
RN7SKP54-201ENST00000410704 TOMM70O94826 608 aa11.91□□□□□ -0.5
RN7SKP54-201ENST00000410704 RASA1P20936 1047 aa11.91□□□□□ -0.5
RN7SKP54-201ENST00000410704 IREB2P48200 963 aaKnown RBP11.91□□□□□ -0.5
RN7SKP54-201ENST00000410704 TFAP4Q01664 338 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms