RNA–Protein interactions for RNA: ENST00000410628.1

RNU4-43P-201, Transcript of RNA, U4 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU4-43P, Length 137 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-43P-201ENST00000410628 SYNGAP1Q96PV0 1343 aa3.37□□□□□ -1.87
RNU4-43P-201ENST00000410628 PITPNM2Q9BZ72 1349 aa3.37□□□□□ -1.87
RNU4-43P-201ENST00000410628 H3BS24 57 aa3.36□□□□□ -1.87
RNU4-43P-201ENST00000410628 FBXO24O75426 580 aa3.36□□□□□ -1.87
RNU4-43P-201ENST00000410628 PAGE1O75459 146 aa3.36□□□□□ -1.87
RNU4-43P-201ENST00000410628 TSPAN15O95858 294 aa3.36□□□□□ -1.87
RNU4-43P-201ENST00000410628 EOMESO95936 686 aa3.36□□□□□ -1.87
RNU4-43P-201ENST00000410628 IGHA2P01877 340 aa3.36□□□□□ -1.87
RNU4-43P-201ENST00000410628 GLI1P08151 1106 aa3.36□□□□□ -1.87
RNU4-43P-201ENST00000410628 ERVFC1P60507 584 aa3.36□□□□□ -1.87
RNU4-43P-201ENST00000410628 PTPN12Q05209 780 aaKnown RBP3.36□□□□□ -1.87
RNU4-43P-201ENST00000410628 TMEM67Q5HYA8 995 aa3.36□□□□□ -1.87
RNU4-43P-201ENST00000410628 ANKLE2Q86XL3 938 aa3.36□□□□□ -1.87
RNU4-43P-201ENST00000410628 RNF214Q8ND24 703 aa3.36□□□□□ -1.87
RNU4-43P-201ENST00000410628 ZSCAN18Q8TBC5 510 aaPredicted RBP3.36□□□□□ -1.87
RNU4-43P-201ENST00000410628 ASB11Q8WXH4 323 aa3.36□□□□□ -1.87
RNU4-43P-201ENST00000410628 FAM129BQ96TA1 746 aa3.36□□□□□ -1.87
RNU4-43P-201ENST00000410628 PICK1Q9NRD5 415 aa3.36□□□□□ -1.87
RNU4-43P-201ENST00000410628 KRT82Q9NSB4 513 aa3.36□□□□□ -1.87
RNU4-43P-201ENST00000410628 GNAT3A8MTJ3 354 aa3.35□□□□□ -1.87
RNU4-43P-201ENST00000410628 WASH4PA8MWX3 477 aa3.35□□□□□ -1.87
RNU4-43P-201ENST00000410628 NDUFB5O43674 189 aa3.35□□□□□ -1.87
RNU4-43P-201ENST00000410628 INHBBP09529 407 aa3.35□□□□□ -1.87
RNU4-43P-201ENST00000410628 ARNTP27540 789 aa3.35□□□□□ -1.87
RNU4-43P-201ENST00000410628 AFMP43652 599 aa3.35□□□□□ -1.87
RNU4-43P-201ENST00000410628 KRTAP19-4Q3LI73 84 aa3.35□□□□□ -1.87
RNU4-43P-201ENST00000410628 RPS26P11Q5JNZ5 115 aaPredicted RBP3.35□□□□□ -1.87
RNU4-43P-201ENST00000410628 NXPE4Q6UWF7 544 aa3.35□□□□□ -1.87
RNU4-43P-201ENST00000410628 TPTE2Q6XPS3 522 aa3.35□□□□□ -1.87
RNU4-43P-201ENST00000410628 CYFIP1Q7L576 1253 aa3.35□□□□□ -1.87
RNU4-43P-201ENST00000410628 RIN3Q8TB24 985 aa3.35□□□□□ -1.87
RNU4-43P-201ENST00000410628 BCO2Q9BYV7 579 aa3.35□□□□□ -1.87
RNU4-43P-201ENST00000410628 SEMA3GQ9NS98 782 aa3.35□□□□□ -1.87
RNU4-43P-201ENST00000410628 FAM53CQ9NYF3 392 aa3.35□□□□□ -1.87
RNU4-43P-201ENST00000410628 MTMR7Q9Y216 660 aa3.35□□□□□ -1.87
RNU4-43P-201ENST00000410628 SNX11Q9Y5W9 270 aa3.35□□□□□ -1.87
RNU4-43P-201ENST00000410628 SLITRK5O94991 958 aa3.34□□□□□ -1.87
RNU4-43P-201ENST00000410628 TRHRP34981 398 aaPredicted RBP3.34□□□□□ -1.87
RNU4-43P-201ENST00000410628 CDK8P49336 464 aa3.34□□□□□ -1.87
RNU4-43P-201ENST00000410628 ERVK-24P63145 666 aa3.34□□□□□ -1.87
RNU4-43P-201ENST00000410628 FGD1P98174 961 aa3.34□□□□□ -1.87
RNU4-43P-201ENST00000410628 PPP2R3AQ06190 1150 aa3.34□□□□□ -1.87
RNU4-43P-201ENST00000410628 ZNF252P-AS1Q0IIN9 211 aa3.34□□□□□ -1.87
RNU4-43P-201ENST00000410628 ATG14Q6ZNE5 492 aa3.34□□□□□ -1.87
RNU4-43P-201ENST00000410628 TTLL10Q6ZVT0 673 aa3.34□□□□□ -1.87
RNU4-43P-201ENST00000410628 ARMCX6Q7L4S7 300 aa3.34□□□□□ -1.87
RNU4-43P-201ENST00000410628 C1orf115Q9H7X2 142 aa3.34□□□□□ -1.87
RNU4-43P-201ENST00000410628 FBRSQ9HAH7 460 aa3.34□□□□□ -1.87
RNU4-43P-201ENST00000410628 PRDM5Q9NQX1 630 aaPredicted RBP3.34□□□□□ -1.87
RNU4-43P-201ENST00000410628 SLAMF8Q9P0V8 285 aa3.34□□□□□ -1.87
RNU4-43P-201ENST00000410628 GTF2IRD1Q9UHL9 959 aa3.34□□□□□ -1.87
RNU4-43P-201ENST00000410628 TRAK1Q9UPV9 953 aa3.34□□□□□ -1.87
RNU4-43P-201ENST00000410628 DNAJC25-GNG10A0A024R161 153 aa3.33□□□□□ -1.88
RNU4-43P-201ENST00000410628 PRAMEF27A3QJZ7 478 aa3.33□□□□□ -1.88
RNU4-43P-201ENST00000410628 FAM155AB1AL88 458 aaPredicted RBP3.33□□□□□ -1.88
RNU4-43P-201ENST00000410628 NFIBO00712 420 aa3.33□□□□□ -1.88
RNU4-43P-201ENST00000410628 CBX7O95931 251 aa3.33□□□□□ -1.88
RNU4-43P-201ENST00000410628 NEFLP07196 543 aa3.33□□□□□ -1.88
RNU4-43P-201ENST00000410628 PTPN11Q06124 597 aaPredicted RBP3.33□□□□□ -1.88
RNU4-43P-201ENST00000410628 INPP5AQ14642 412 aa3.33□□□□□ -1.88
RNU4-43P-201ENST00000410628 NKG7Q16617 165 aa3.33□□□□□ -1.88
RNU4-43P-201ENST00000410628 RALGPS1Q5JS13 557 aa3.33□□□□□ -1.88
RNU4-43P-201ENST00000410628 ZBTB37Q5TC79 503 aa3.33□□□□□ -1.88
RNU4-43P-201ENST00000410628 BHLHE22Q8NFJ8 381 aaPredicted RBP3.33□□□□□ -1.88
RNU4-43P-201ENST00000410628 XAGE3Q8WTP9 111 aa3.33□□□□□ -1.88
RNU4-43P-201ENST00000410628 C20orf173Q96LM9 149 aa3.33□□□□□ -1.88
RNU4-43P-201ENST00000410628 PPP1R16BQ96T49 567 aa3.33□□□□□ -1.88
RNU4-43P-201ENST00000410628 SETDB2Q96T68 719 aa3.33□□□□□ -1.88
RNU4-43P-201ENST00000410628 MIPEPQ99797 713 aa3.33□□□□□ -1.88
RNU4-43P-201ENST00000410628 DNAJC25Q9H1X3 360 aa3.33□□□□□ -1.88
RNU4-43P-201ENST00000410628 TPX2Q9ULW0 747 aaKnown RBP3.33□□□□□ -1.88
RNU4-43P-201ENST00000410628 ETV2O00321 342 aaPredicted RBP3.32□□□□□ -1.88
RNU4-43P-201ENST00000410628 IGF2BP3O00425 579 aaKnown RBP eCLIP3.32□□□□□ -1.88
RNU4-43P-201ENST00000410628 BMP6P22004 513 aa3.32□□□□□ -1.88
RNU4-43P-201ENST00000410628 NME2P22392 152 aa3.32□□□□□ -1.88
RNU4-43P-201ENST00000410628 CLCN7P51798 805 aa3.32□□□□□ -1.88
RNU4-43P-201ENST00000410628 HK2P52789 917 aa3.32□□□□□ -1.88
RNU4-43P-201ENST00000410628 PDE3BQ13370 1112 aa3.32□□□□□ -1.88
RNU4-43P-201ENST00000410628 KCNA10Q16322 511 aa3.32□□□□□ -1.88
RNU4-43P-201ENST00000410628 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.32□□□□□ -1.88
RNU4-43P-201ENST00000410628 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.32□□□□□ -1.88
RNU4-43P-201ENST00000410628 CDC37L1Q7L3B6 337 aa3.32□□□□□ -1.88
RNU4-43P-201ENST00000410628 TTC6Q86TZ1 520 aa3.32□□□□□ -1.88
RNU4-43P-201ENST00000410628 LSRQ86X29 649 aaPredicted RBP3.32□□□□□ -1.88
RNU4-43P-201ENST00000410628 FBXO15Q8NCQ5 510 aaPredicted RBP3.32□□□□□ -1.88
RNU4-43P-201ENST00000410628 UBE2FQ969M7 185 aa3.32□□□□□ -1.88
RNU4-43P-201ENST00000410628 FOXQ1Q9C009 403 aa3.32□□□□□ -1.88
RNU4-43P-201ENST00000410628 IRF2BPLQ9H1B7 796 aa3.32□□□□□ -1.88
RNU4-43P-201ENST00000410628 DCP1AQ9NPI6 582 aaPredicted RBP3.32□□□□□ -1.88
RNU4-43P-201ENST00000410628 ZSWIM5Q9P217 1185 aa3.32□□□□□ -1.88
RNU4-43P-201ENST00000410628 EGFL7Q9UHF1 273 aa3.32□□□□□ -1.88
RNU4-43P-201ENST00000410628 PCDHA4Q9UN74 947 aa3.32□□□□□ -1.88
RNU4-43P-201ENST00000410628 ENC1O14682 589 aa3.31□□□□□ -1.88
RNU4-43P-201ENST00000410628 NUAK1O60285 661 aa3.31□□□□□ -1.88
RNU4-43P-201ENST00000410628 TMEM253P0C7T8 217 aa3.31□□□□□ -1.88
RNU4-43P-201ENST00000410628 HOXA5P20719 270 aa3.31□□□□□ -1.88
RNU4-43P-201ENST00000410628 GDNFP39905 211 aa3.31□□□□□ -1.88
RNU4-43P-201ENST00000410628 CTSWP56202 376 aa3.31□□□□□ -1.88
RNU4-43P-201ENST00000410628 RING1Q06587 406 aa3.31□□□□□ -1.88
RNU4-43P-201ENST00000410628 LRFN4Q6PJG9 635 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms