RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 GSDMDP57764 484 aa27.49■■□□□ 1.99
PMS1-205ENST00000409985 SART3Q15020 963 aaKnown RBP27.49■■□□□ 1.99
PMS1-205ENST00000409985 NFXL1Q6ZNB6 911 aa27.49■■□□□ 1.99
PMS1-205ENST00000409985 MFSD6Q6ZSS7 791 aa27.49■■□□□ 1.99
PMS1-205ENST00000409985 HELBQ8NG08 1087 aaPredicted RBP27.49■■□□□ 1.99
PMS1-205ENST00000409985 CACTINQ8WUQ7 758 aaKnown RBP27.49■■□□□ 1.99
PMS1-205ENST00000409985 RNF41Q9H4P4 317 aaPredicted RBP27.49■■□□□ 1.99
PMS1-205ENST00000409985 SLC12A7Q9Y666 1083 aa27.49■■□□□ 1.99
PMS1-205ENST00000409985 SMTNL1A8MU46 457 aa27.49■■□□□ 1.99
PMS1-205ENST00000409985 PPP2R5BQ15173 497 aa27.49■■□□□ 1.99
PMS1-205ENST00000409985 PTPAQ15257 358 aa27.49■■□□□ 1.99
PMS1-205ENST00000409985 DENND2AQ9ULE3 1009 aa27.49■■□□□ 1.99
PMS1-205ENST00000409985 ECM29Q5VYK3 1845 aa27.48■■□□□ 1.99
PMS1-205ENST00000409985 CCDC69A6NI79 296 aa27.48■■□□□ 1.99
PMS1-205ENST00000409985 PFKFB1P16118 471 aa27.48■■□□□ 1.99
PMS1-205ENST00000409985 TPM4P67936 248 aa27.48■■□□□ 1.99
PMS1-205ENST00000409985 SSRP1Q08945 709 aaKnown RBP27.48■■□□□ 1.99
PMS1-205ENST00000409985 MAP3K14Q99558 947 aa27.48■■□□□ 1.99
PMS1-205ENST00000409985 IFIT3O14879 490 aaKnown RBP27.47■■□□□ 1.99
PMS1-205ENST00000409985 IKBKBO14920 756 aa27.47■■□□□ 1.99
PMS1-205ENST00000409985 CCDC144BQ3MJ40 725 aa27.47■■□□□ 1.99
PMS1-205ENST00000409985 CCDC144CPQ8IYA2 1237 aa27.47■■□□□ 1.99
PMS1-205ENST00000409985 AOPEPQ8N6M6 819 aa27.47■■□□□ 1.99
PMS1-205ENST00000409985 SETDB2Q96T68 719 aa27.47■■□□□ 1.99
PMS1-205ENST00000409985 TUBE1Q9UJT0 475 aa27.47■■□□□ 1.99
PMS1-205ENST00000409985 CCDC196A0A1B0GTZ2 297 aa27.47■■□□□ 1.99
PMS1-205ENST00000409985 CUTAO60888 179 aa27.47■■□□□ 1.99
PMS1-205ENST00000409985 LRMPQ12912 555 aa27.47■■□□□ 1.99
PMS1-205ENST00000409985 NLGN1Q8N2Q7 840 aa27.47■■□□□ 1.99
PMS1-205ENST00000409985 OSBPL5Q9H0X9 879 aaPredicted RBP27.47■■□□□ 1.99
PMS1-205ENST00000409985 GOLGB1Q14789 3259 aaKnown RBP27.46■■□□□ 1.99
PMS1-205ENST00000409985 POLRMTO00411 1230 aaKnown RBP27.46■■□□□ 1.99
PMS1-205ENST00000409985 RBM10P98175 930 aaKnown RBP27.46■■□□□ 1.99
PMS1-205ENST00000409985 MICU3Q86XE3 530 aa27.46■■□□□ 1.99
PMS1-205ENST00000409985 RAB11FIP4Q86YS3 637 aa27.46■■□□□ 1.99
PMS1-205ENST00000409985 NKX2-3Q8TAU0 364 aa27.46■■□□□ 1.99
PMS1-205ENST00000409985 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.46■■□□□ 1.99
PMS1-205ENST00000409985 GJB4Q9NTQ9 266 aa27.46■■□□□ 1.99
PMS1-205ENST00000409985 ANAPC4Q9UJX5 808 aa27.46■■□□□ 1.99
PMS1-205ENST00000409985 ZNF804BA4D1E1 1349 aa27.46■■□□□ 1.99
PMS1-205ENST00000409985 MYO1BO43795 1136 aa27.45■■□□□ 1.99
PMS1-205ENST00000409985 ZBTB7AO95365 584 aa27.45■■□□□ 1.99
PMS1-205ENST00000409985 CCDC24Q8N4L8 307 aa27.45■■□□□ 1.99
PMS1-205ENST00000409985 ARMT1Q9H993 441 aa27.45■■□□□ 1.99
PMS1-205ENST00000409985 SEC31BQ9NQW1 1179 aa27.45■■□□□ 1.99
PMS1-205ENST00000409985 PAXBP1Q9Y5B6 917 aa27.45■■□□□ 1.99
PMS1-205ENST00000409985 RANBP6O60518 1105 aaKnown RBP27.44■■□□□ 1.98
PMS1-205ENST00000409985 WDHD1O75717 1129 aaPredicted RBP27.44■■□□□ 1.98
PMS1-205ENST00000409985 SYKP43405 635 aa27.44■■□□□ 1.98
PMS1-205ENST00000409985 GNL2Q13823 731 aaKnown RBP27.44■■□□□ 1.98
PMS1-205ENST00000409985 RESP18Q5W5W9 173 aa27.44■■□□□ 1.98
PMS1-205ENST00000409985 NOL10Q9BSC4 688 aaKnown RBP27.44■■□□□ 1.98
PMS1-205ENST00000409985 MORC2Q9Y6X9 1032 aaPredicted RBP27.44■■□□□ 1.98
PMS1-205ENST00000409985 MMP10P09238 476 aa27.44■■□□□ 1.98
PMS1-205ENST00000409985 SENP2Q9HC62 589 aa27.44■■□□□ 1.98
PMS1-205ENST00000409985 CTIFO43310 598 aaKnown RBP27.43■■□□□ 1.98
PMS1-205ENST00000409985 SYCP1Q15431 976 aa27.43■■□□□ 1.98
PMS1-205ENST00000409985 TRIM22Q8IYM9 498 aa27.43■■□□□ 1.98
PMS1-205ENST00000409985 SLC4A4Q9Y6R1 1079 aa27.43■■□□□ 1.98
PMS1-205ENST00000409985 DPCR1Q3MIW9 517 aa27.42■■□□□ 1.98
PMS1-205ENST00000409985 PHKBQ93100 1093 aa27.42■■□□□ 1.98
PMS1-205ENST00000409985 AIFM3Q96NN9 605 aa27.42■■□□□ 1.98
PMS1-205ENST00000409985 GNL3LQ9NVN8 582 aaKnown RBP27.42■■□□□ 1.98
PMS1-205ENST00000409985 ERICH2A1L162 156 aa27.42■■□□□ 1.98
PMS1-205ENST00000409985 TDO2P48775 406 aa27.42■■□□□ 1.98
PMS1-205ENST00000409985 CTDSPL2Q05D32 466 aa27.42■■□□□ 1.98
PMS1-205ENST00000409985 CHRNDQ07001 517 aa27.42■■□□□ 1.98
PMS1-205ENST00000409985 SAFBQ15424 915 aaKnown RBP eCLIP27.42■■□□□ 1.98
PMS1-205ENST00000409985 FOXP1Q9H334 677 aaPredicted RBP27.42■■□□□ 1.98
PMS1-205ENST00000409985 SERPINB2P05120 415 aa27.41■■□□□ 1.98
PMS1-205ENST00000409985 PCP11498 1178 aaKnown RBP27.41■■□□□ 1.98
PMS1-205ENST00000409985 BCAMP50895 628 aa27.41■■□□□ 1.98
PMS1-205ENST00000409985 UBE4AQ14139 1066 aa27.41■■□□□ 1.98
PMS1-205ENST00000409985 WTAPQ15007 396 aa27.41■■□□□ 1.98
PMS1-205ENST00000409985 ERFEQ4G0M1 354 aa27.41■■□□□ 1.98
PMS1-205ENST00000409985 NOSTRINQ8IVI9 506 aa27.41■■□□□ 1.98
PMS1-205ENST00000409985 LCORLQ8N3X6 602 aa27.41■■□□□ 1.98
PMS1-205ENST00000409985 SLC16A10Q8TF71 515 aa27.41■■□□□ 1.98
PMS1-205ENST00000409985 NRXN2Q9P2S2 1712 aa27.41■■□□□ 1.98
PMS1-205ENST00000409985 MMP1P03956 469 aa27.4■■□□□ 1.98
PMS1-205ENST00000409985 KCNJ6P48051 423 aa27.4■■□□□ 1.98
PMS1-205ENST00000409985 SF3B3Q15393 1217 aaKnown RBP27.4■■□□□ 1.98
PMS1-205ENST00000409985 RTN1Q16799 776 aa27.4■■□□□ 1.98
PMS1-205ENST00000409985 SHC4Q6S5L8 630 aa27.4■■□□□ 1.98
PMS1-205ENST00000409985 LRP2BPQ9P2M1 347 aa27.4■■□□□ 1.98
PMS1-205ENST00000409985 MROH7-TTC4A0A0A0MT08 1334 aa27.4■■□□□ 1.98
PMS1-205ENST00000409985 DEXIO95424 95 aa27.4■■□□□ 1.98
PMS1-205ENST00000409985 TMED8Q6PL24 325 aaPredicted RBP27.4■■□□□ 1.98
PMS1-205ENST00000409985 NBPF5PQ86XG9 351 aaPredicted RBP27.4■■□□□ 1.98
PMS1-205ENST00000409985 SLC26A6Q9BXS9 759 aa27.4■■□□□ 1.98
PMS1-205ENST00000409985 ATF5Q9Y2D1 282 aaPredicted RBP27.4■■□□□ 1.98
PMS1-205ENST00000409985 TACC3Q9Y6A5 838 aa27.4■■□□□ 1.98
PMS1-205ENST00000409985 RIOK3O14730 519 aaKnown RBP27.39■■□□□ 1.98
PMS1-205ENST00000409985 RILPL1Q5EBL4 403 aa27.39■■□□□ 1.98
PMS1-205ENST00000409985 PRR5LQ6MZQ0 368 aa27.39■■□□□ 1.98
PMS1-205ENST00000409985 ZBTB22O15209 634 aa27.38■■□□□ 1.97
PMS1-205ENST00000409985 RXRAP19793 462 aa27.38■■□□□ 1.97
PMS1-205ENST00000409985 C3orf67Q6ZVT6 689 aa27.38■■□□□ 1.97
PMS1-205ENST00000409985 CCDC150Q8NCX0 1101 aa27.38■■□□□ 1.97
PMS1-205ENST00000409985 A0A1B0GUL6 1792 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms