RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 NMRK2Q9NPI5 230 aa16.5■□□□□ 0.23
LIMS2-206ENST00000409754 SCN4AP35499 1836 aa16.5■□□□□ 0.23
LIMS2-206ENST00000409754 MROH7-TTC4A0A0A0MT08 1334 aa16.5■□□□□ 0.23
LIMS2-206ENST00000409754 IFIT3O14879 490 aaKnown RBP16.49■□□□□ 0.23
LIMS2-206ENST00000409754 MBD3O95983 291 aa16.49■□□□□ 0.23
LIMS2-206ENST00000409754 SCNN1DP51172 638 aa16.49■□□□□ 0.23
LIMS2-206ENST00000409754 ESR2Q92731 530 aa16.49■□□□□ 0.23
LIMS2-206ENST00000409754 NOL10Q9BSC4 688 aaKnown RBP16.49■□□□□ 0.23
LIMS2-206ENST00000409754 GZF1Q9H116 711 aaPredicted RBP16.49■□□□□ 0.23
LIMS2-206ENST00000409754 TOMM22Q9NS69 142 aa16.49■□□□□ 0.23
LIMS2-206ENST00000409754 ARPP21Q9UBL0 812 aaPredicted RBP16.49■□□□□ 0.23
LIMS2-206ENST00000409754 USP17L12C9JPN9 530 aa16.48■□□□□ 0.23
LIMS2-206ENST00000409754 USP17L21D6R901 530 aa16.48■□□□□ 0.23
LIMS2-206ENST00000409754 FOXD4L6Q3SYB3 417 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-206ENST00000409754 RRP12Q5JTH9 1297 aaKnown RBP16.48■□□□□ 0.23
LIMS2-206ENST00000409754 MFSD14BQ5SR56 506 aa16.48■□□□□ 0.23
LIMS2-206ENST00000409754 APOA5Q6Q788 366 aa16.48■□□□□ 0.23
LIMS2-206ENST00000409754 FOXD4L3Q6VB84 417 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-206ENST00000409754 SLF2Q8IX21 1173 aa16.48■□□□□ 0.23
LIMS2-206ENST00000409754 TMTC2Q8N394 836 aa16.48■□□□□ 0.23
LIMS2-206ENST00000409754 L3MBTL3Q96JM7 780 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-206ENST00000409754 SUGT1Q9Y2Z0 365 aa16.48■□□□□ 0.23
LIMS2-206ENST00000409754 ZBTB12Q9Y330 459 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-206ENST00000409754 H3BQV1 296 aa16.48■□□□□ 0.23
LIMS2-206ENST00000409754 METAP2P50579 478 aaKnown RBP eCLIP16.48■□□□□ 0.23
LIMS2-206ENST00000409754 DIXDC1Q155Q3 683 aa16.48■□□□□ 0.23
LIMS2-206ENST00000409754 CSPP1Q1MSJ5 1256 aa16.48■□□□□ 0.23
LIMS2-206ENST00000409754 DACT2Q5SW24 774 aa16.48■□□□□ 0.23
LIMS2-206ENST00000409754 IFFO2Q5TF58 517 aa16.48■□□□□ 0.23
LIMS2-206ENST00000409754 NFXL1Q6ZNB6 911 aa16.48■□□□□ 0.23
LIMS2-206ENST00000409754 PODNQ7Z5L7 613 aa16.48■□□□□ 0.23
LIMS2-206ENST00000409754 USP48Q86UV5 1035 aa16.48■□□□□ 0.23
LIMS2-206ENST00000409754 GPC2Q8N158 579 aa16.48■□□□□ 0.23
LIMS2-206ENST00000409754 CERS5Q8N5B7 392 aa16.48■□□□□ 0.23
LIMS2-206ENST00000409754 FAM163AQ96GL9 167 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-206ENST00000409754 GMLQ99445 158 aa16.48■□□□□ 0.23
LIMS2-206ENST00000409754 CNPY2Q9Y2B0 182 aa16.48■□□□□ 0.23
LIMS2-206ENST00000409754 BAZ2AQ9UIF9 1905 aaKnown RBP16.47■□□□□ 0.23
LIMS2-206ENST00000409754 NID2Q14112 1375 aa16.47■□□□□ 0.23
LIMS2-206ENST00000409754 CYP2D7A0A087X1C5 515 aa16.47■□□□□ 0.23
LIMS2-206ENST00000409754 GPR75-ASB3A0A0A6YYF3 556 aa16.47■□□□□ 0.23
LIMS2-206ENST00000409754 ERICH2A1L162 156 aa16.47■□□□□ 0.23
LIMS2-206ENST00000409754 CPLX1O14810 134 aa16.47■□□□□ 0.23
LIMS2-206ENST00000409754 ZBTB43O43298 467 aa16.47■□□□□ 0.23
LIMS2-206ENST00000409754 SLC3A2P08195 630 aaKnown RBP16.47■□□□□ 0.23
LIMS2-206ENST00000409754 VIL1P09327 827 aaKnown RBP16.47■□□□□ 0.23
LIMS2-206ENST00000409754 NT5C2P49902 561 aa16.47■□□□□ 0.23
LIMS2-206ENST00000409754 CIAPIN1Q6FI81 312 aa16.47■□□□□ 0.23
LIMS2-206ENST00000409754 RGS22Q8NE09 1264 aa16.47■□□□□ 0.23
LIMS2-206ENST00000409754 GPT2Q8TD30 523 aa16.47■□□□□ 0.23
LIMS2-206ENST00000409754 ZSCAN16Q9H4T2 348 aaPredicted RBP16.47■□□□□ 0.23
LIMS2-206ENST00000409754 SENP2Q9HC62 589 aa16.47■□□□□ 0.23
LIMS2-206ENST00000409754 MKRN1Q9UHC7 482 aaKnown RBP16.47■□□□□ 0.23
LIMS2-206ENST00000409754 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.47■□□□□ 0.23
LIMS2-206ENST00000409754 GJA3Q9Y6H8 435 aa16.47■□□□□ 0.23
LIMS2-206ENST00000409754 LAMB1P07942 1786 aa16.47■□□□□ 0.23
LIMS2-206ENST00000409754 CCDC69A6NI79 296 aa16.46■□□□□ 0.23
LIMS2-206ENST00000409754 ORC4O43929 436 aa16.46■□□□□ 0.23
LIMS2-206ENST00000409754 CDKL5O76039 1030 aa16.46■□□□□ 0.23
LIMS2-206ENST00000409754 FDPSP14324 419 aaKnown RBP16.46■□□□□ 0.23
LIMS2-206ENST00000409754 GMPSP49915 693 aaPredicted RBP16.46■□□□□ 0.23
LIMS2-206ENST00000409754 RCAN1P53805 252 aa16.46■□□□□ 0.23
LIMS2-206ENST00000409754 EIF6P56537 245 aaKnown RBP16.46■□□□□ 0.23
LIMS2-206ENST00000409754 DNM1Q05193 864 aaKnown RBP16.46■□□□□ 0.23
LIMS2-206ENST00000409754 WTAPQ15007 396 aa16.46■□□□□ 0.23
LIMS2-206ENST00000409754 CPLX2Q6PUV4 134 aaKnown RBP16.46■□□□□ 0.23
LIMS2-206ENST00000409754 SH3RF3Q8TEJ3 882 aaPredicted RBP16.46■□□□□ 0.23
LIMS2-206ENST00000409754 SLC12A7Q9Y666 1083 aa16.46■□□□□ 0.23
LIMS2-206ENST00000409754 GAKO14976 1311 aa16.46■□□□□ 0.23
LIMS2-206ENST00000409754 KIF3CO14782 793 aa16.45■□□□□ 0.22
LIMS2-206ENST00000409754 PLCG2P16885 1265 aa16.45■□□□□ 0.22
LIMS2-206ENST00000409754 NCLP19338 710 aaKnown RBP16.45■□□□□ 0.22
LIMS2-206ENST00000409754 USP5P45974 858 aa16.45■□□□□ 0.22
LIMS2-206ENST00000409754 GTF2IP78347 998 aa16.45■□□□□ 0.22
LIMS2-206ENST00000409754 RESTQ13127 1097 aa16.45■□□□□ 0.22
LIMS2-206ENST00000409754 SYNE3Q6ZMZ3 975 aa16.45■□□□□ 0.22
LIMS2-206ENST00000409754 FERMT3Q86UX7 667 aa16.45■□□□□ 0.22
LIMS2-206ENST00000409754 STK11IPQ8N1F8 1099 aa16.45■□□□□ 0.22
LIMS2-206ENST00000409754 UBAC1Q9BSL1 405 aa16.45■□□□□ 0.22
LIMS2-206ENST00000409754 GDPD2Q9HCC8 539 aa16.45■□□□□ 0.22
LIMS2-206ENST00000409754 MYH2Q9UKX2 1941 aa16.45■□□□□ 0.22
LIMS2-206ENST00000409754 TCHHQ07283 1943 aa16.45■□□□□ 0.22
LIMS2-206ENST00000409754 GOLGA8AA7E2F4 631 aa16.45■□□□□ 0.22
LIMS2-206ENST00000409754 SMIM22K7EJ46 135 aa16.45■□□□□ 0.22
LIMS2-206ENST00000409754 EGFRP00533 1210 aa16.45■□□□□ 0.22
LIMS2-206ENST00000409754 BTDP43251 543 aa16.45■□□□□ 0.22
LIMS2-206ENST00000409754 KRT85P78386 507 aa16.45■□□□□ 0.22
LIMS2-206ENST00000409754 MICU3Q86XE3 530 aa16.45■□□□□ 0.22
LIMS2-206ENST00000409754 RAB11FIP4Q86YS3 637 aa16.45■□□□□ 0.22
LIMS2-206ENST00000409754 MCM9Q9NXL9 1143 aa16.45■□□□□ 0.22
LIMS2-206ENST00000409754 ORC3Q9UBD5 711 aaPredicted RBP16.45■□□□□ 0.22
LIMS2-206ENST00000409754 ISY1Q9ULR0 285 aaKnown RBP16.45■□□□□ 0.22
LIMS2-206ENST00000409754 USP17L3A6NCW0 530 aa16.44■□□□□ 0.22
LIMS2-206ENST00000409754 USP17L4A6NCW7 530 aa16.44■□□□□ 0.22
LIMS2-206ENST00000409754 SEC23AQ15436 765 aa16.44■□□□□ 0.22
LIMS2-206ENST00000409754 C12orf60Q5U649 245 aa16.44■□□□□ 0.22
LIMS2-206ENST00000409754 USP17L1Q7RTZ2 530 aa16.44■□□□□ 0.22
LIMS2-206ENST00000409754 ZKSCAN3Q9BRR0 538 aa16.44■□□□□ 0.22
LIMS2-206ENST00000409754 FIBPO43427 364 aa16.43■□□□□ 0.22
LIMS2-206ENST00000409754 POTEIP0CG38 1075 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms