RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 C9orf131Q5VYM1 1079 aa18.48■□□□□ 0.55
SHANK2-204ENST00000409530 SAMD7Q7Z3H4 446 aa18.48■□□□□ 0.55
SHANK2-204ENST00000409530 RNF41Q9H4P4 317 aaPredicted RBP18.48■□□□□ 0.55
SHANK2-204ENST00000409530 HDLBPQ00341 1268 aaKnown RBP18.47■□□□□ 0.55
SHANK2-204ENST00000409530 NBPF9Q3BBW0 867 aa18.47■□□□□ 0.55
SHANK2-204ENST00000409530 MYOZ2Q9NPC6 264 aa18.47■□□□□ 0.55
SHANK2-204ENST00000409530 LIMCH1Q9UPQ0 1083 aa18.47■□□□□ 0.55
SHANK2-204ENST00000409530 FAM196BA6NMK8 535 aa18.47■□□□□ 0.55
SHANK2-204ENST00000409530 SLC3A2P08195 630 aaKnown RBP18.47■□□□□ 0.55
SHANK2-204ENST00000409530 CCDC83Q8IWF9 413 aa18.47■□□□□ 0.55
SHANK2-204ENST00000409530 KRT23Q9C075 422 aa18.47■□□□□ 0.55
SHANK2-204ENST00000409530 OSBPL5Q9H0X9 879 aaPredicted RBP18.47■□□□□ 0.55
SHANK2-204ENST00000409530 CNNM2Q9H8M5 875 aa18.47■□□□□ 0.55
SHANK2-204ENST00000409530 ZSWIM5Q9P217 1185 aa18.47■□□□□ 0.55
SHANK2-204ENST00000409530 EXOSC10Q01780 885 aaKnown RBP18.46■□□□□ 0.55
SHANK2-204ENST00000409530 ME3Q16798 604 aa18.46■□□□□ 0.55
SHANK2-204ENST00000409530 SENP2Q9HC62 589 aa18.46■□□□□ 0.55
SHANK2-204ENST00000409530 TMOD2Q9NZR1 351 aa18.46■□□□□ 0.55
SHANK2-204ENST00000409530 ANAPC4Q9UJX5 808 aa18.46■□□□□ 0.55
SHANK2-204ENST00000409530 MYH8P13535 1937 aa18.46■□□□□ 0.55
SHANK2-204ENST00000409530 PPFIA3O75145 1194 aa18.46■□□□□ 0.55
SHANK2-204ENST00000409530 MCM2P49736 904 aa18.46■□□□□ 0.55
SHANK2-204ENST00000409530 PDE4BQ07343 736 aa18.46■□□□□ 0.55
SHANK2-204ENST00000409530 SBK1Q52WX2 424 aa18.46■□□□□ 0.55
SHANK2-204ENST00000409530 MKNK2Q9HBH9 465 aa18.46■□□□□ 0.55
SHANK2-204ENST00000409530 FAM198AQ9UFP1 575 aa18.46■□□□□ 0.55
SHANK2-204ENST00000409530 CNOT7Q9UIV1 285 aaKnown RBP18.46■□□□□ 0.55
SHANK2-204ENST00000409530 NMT2O60551 498 aa18.45■□□□□ 0.54
SHANK2-204ENST00000409530 DDNO94850 711 aaPredicted RBP18.45■□□□□ 0.54
SHANK2-204ENST00000409530 ESR2Q92731 530 aa18.45■□□□□ 0.54
SHANK2-204ENST00000409530 CHMP4CQ96CF2 233 aa18.45■□□□□ 0.54
SHANK2-204ENST00000409530 ASTN2O75129 1339 aaPredicted RBP18.45■□□□□ 0.54
SHANK2-204ENST00000409530 IFIT3O14879 490 aaKnown RBP18.44■□□□□ 0.54
SHANK2-204ENST00000409530 RXRAP19793 462 aa18.44■□□□□ 0.54
SHANK2-204ENST00000409530 ANKRD1Q15327 319 aa18.44■□□□□ 0.54
SHANK2-204ENST00000409530 TMEM67Q5HYA8 995 aa18.44■□□□□ 0.54
SHANK2-204ENST00000409530 NFXL1Q6ZNB6 911 aa18.44■□□□□ 0.54
SHANK2-204ENST00000409530 DDTLA6NHG4 134 aaPredicted RBP18.44■□□□□ 0.54
SHANK2-204ENST00000409530 TSPY2A6NKD2 308 aa18.44■□□□□ 0.54
SHANK2-204ENST00000409530 WNT10BO00744 389 aa18.44■□□□□ 0.54
SHANK2-204ENST00000409530 CCT2P78371 535 aaKnown RBP18.44■□□□□ 0.54
SHANK2-204ENST00000409530 UBAC1Q9BSL1 405 aa18.44■□□□□ 0.54
SHANK2-204ENST00000409530 MYL10Q9BUA6 226 aa18.44■□□□□ 0.54
SHANK2-204ENST00000409530 ZNF70Q9UC06 446 aaPredicted RBP18.44■□□□□ 0.54
SHANK2-204ENST00000409530 KLF18A0A0U1RQI7 1052 aa18.43■□□□□ 0.54
SHANK2-204ENST00000409530 CCDC144CPQ8IYA2 1237 aa18.43■□□□□ 0.54
SHANK2-204ENST00000409530 MRIQ9BWK5 157 aa18.43■□□□□ 0.54
SHANK2-204ENST00000409530 TAOK2Q9UL54 1235 aa18.43■□□□□ 0.54
SHANK2-204ENST00000409530 GOLGA8BA8MQT2 603 aa18.43■□□□□ 0.54
SHANK2-204ENST00000409530 MYO1BO43795 1136 aa18.43■□□□□ 0.54
SHANK2-204ENST00000409530 RPS12P25398 132 aaKnown RBP18.43■□□□□ 0.54
SHANK2-204ENST00000409530 CRACR2BQ8N4Y2 399 aaPredicted RBP18.43■□□□□ 0.54
SHANK2-204ENST00000409530 NCOA5Q9HCD5 579 aaKnown RBP18.43■□□□□ 0.54
SHANK2-204ENST00000409530 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.43■□□□□ 0.54
SHANK2-204ENST00000409530 TNKSO95271 1327 aa18.42■□□□□ 0.54
SHANK2-204ENST00000409530 SIPA1L1O43166 1804 aa18.42■□□□□ 0.54
SHANK2-204ENST00000409530 HLA-DOAP06340 250 aa18.42■□□□□ 0.54
SHANK2-204ENST00000409530 KIF4BQ2VIQ3 1234 aa18.42■□□□□ 0.54
SHANK2-204ENST00000409530 CDAN1Q8IWY9 1227 aa18.42■□□□□ 0.54
SHANK2-204ENST00000409530 ROBO3Q96MS0 1386 aa18.42■□□□□ 0.54
SHANK2-204ENST00000409530 ERICH2A1L162 156 aa18.41■□□□□ 0.54
SHANK2-204ENST00000409530 SH2B2O14492 632 aaPredicted RBP18.41■□□□□ 0.54
SHANK2-204ENST00000409530 CDK8P49336 464 aa18.41■□□□□ 0.54
SHANK2-204ENST00000409530 ST3GAL1Q11201 340 aa18.41■□□□□ 0.54
SHANK2-204ENST00000409530 MICU3Q86XE3 530 aa18.41■□□□□ 0.54
SHANK2-204ENST00000409530 GPC2Q8N158 579 aa18.41■□□□□ 0.54
SHANK2-204ENST00000409530 BRPF3Q9ULD4 1205 aa18.41■□□□□ 0.54
SHANK2-204ENST00000409530 ANGEL1Q9UNK9 670 aaKnown RBP18.41■□□□□ 0.54
SHANK2-204ENST00000409530 TSPY3P0CV98 308 aa18.41■□□□□ 0.54
SHANK2-204ENST00000409530 TSPY8P0CW00 308 aa18.41■□□□□ 0.54
SHANK2-204ENST00000409530 EPS15P42566 896 aa18.41■□□□□ 0.54
SHANK2-204ENST00000409530 TFAP4Q01664 338 aa18.41■□□□□ 0.54
SHANK2-204ENST00000409530 SART3Q15020 963 aaKnown RBP18.41■□□□□ 0.54
SHANK2-204ENST00000409530 SPDYE2Q495Y8 402 aa18.41■□□□□ 0.54
SHANK2-204ENST00000409530 SH3BP5LQ7L8J4 393 aa18.41■□□□□ 0.54
SHANK2-204ENST00000409530 TTC6Q86TZ1 520 aa18.41■□□□□ 0.54
SHANK2-204ENST00000409530 TRPM4Q8TD43 1214 aa18.41■□□□□ 0.54
SHANK2-204ENST00000409530 TRIM34Q9BYJ4 488 aa18.41■□□□□ 0.54
SHANK2-204ENST00000409530 TMEM39BQ9GZU3 492 aa18.41■□□□□ 0.54
SHANK2-204ENST00000409530 MTMR7Q9Y216 660 aa18.41■□□□□ 0.54
SHANK2-204ENST00000409530 WTAPQ15007 396 aa18.4■□□□□ 0.54
SHANK2-204ENST00000409530 C16orf86Q6ZW13 317 aa18.4■□□□□ 0.54
SHANK2-204ENST00000409530 CSRNP1Q96S65 589 aa18.4■□□□□ 0.54
SHANK2-204ENST00000409530 IDI2Q9BXS1 227 aa18.4■□□□□ 0.54
SHANK2-204ENST00000409530 LY9Q9HBG7 655 aa18.4■□□□□ 0.54
SHANK2-204ENST00000409530 SERPINB13Q9UIV8 391 aa18.4■□□□□ 0.54
SHANK2-204ENST00000409530 H7C1D1 291 aa18.4■□□□□ 0.54
SHANK2-204ENST00000409530 ZNF444Q8N0Y2 327 aaPredicted RBP18.4■□□□□ 0.54
SHANK2-204ENST00000409530 CCDC69A6NI79 296 aa18.39■□□□□ 0.53
SHANK2-204ENST00000409530 ORC4O43929 436 aa18.39■□□□□ 0.53
SHANK2-204ENST00000409530 RASA1P20936 1047 aa18.39■□□□□ 0.53
SHANK2-204ENST00000409530 ZNF280AP59817 542 aaPredicted RBP18.39■□□□□ 0.53
SHANK2-204ENST00000409530 IQCA1Q86XH1 822 aa18.39■□□□□ 0.53
SHANK2-204ENST00000409530 CLEC10AQ8IUN9 316 aa18.39■□□□□ 0.53
SHANK2-204ENST00000409530 ZSCAN31Q96LW9 406 aaPredicted RBP18.39■□□□□ 0.53
SHANK2-204ENST00000409530 ZSCAN10Q96SZ4 725 aaPredicted RBP18.39■□□□□ 0.53
SHANK2-204ENST00000409530 GPRC5DQ9NZD1 345 aa18.39■□□□□ 0.53
SHANK2-204ENST00000409530 MPHOSPH10O00566 681 aaKnown RBP18.38■□□□□ 0.53
SHANK2-204ENST00000409530 SCRN1Q12765 414 aa18.38■□□□□ 0.53
SHANK2-204ENST00000409530 ENAHQ8N8S7 591 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms