RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 SBK1Q52WX2 424 aa24.06■■□□□ 1.44
USP39-203ENST00000409470 KRT40Q6A162 431 aa24.06■■□□□ 1.44
USP39-203ENST00000409470 SP8Q8IXZ3 490 aa24.06■■□□□ 1.44
USP39-203ENST00000409470 TRIM22Q8IYM9 498 aa24.06■■□□□ 1.44
USP39-203ENST00000409470 WASF1Q92558 559 aa24.06■■□□□ 1.44
USP39-203ENST00000409470 MCM9Q9NXL9 1143 aa24.06■■□□□ 1.44
USP39-203ENST00000409470 RTEL1Q9NZ71 1219 aa24.06■■□□□ 1.44
USP39-203ENST00000409470 MYH2Q9UKX2 1941 aa24.06■■□□□ 1.44
USP39-203ENST00000409470 KIAA1551Q9HCM1 1747 aa24.06■■□□□ 1.44
USP39-203ENST00000409470 KIF28PB7ZC32 967 aa24.06■■□□□ 1.44
USP39-203ENST00000409470 CYP2D6P10635 497 aa24.06■■□□□ 1.44
USP39-203ENST00000409470 GNL2Q13823 731 aaKnown RBP24.06■■□□□ 1.44
USP39-203ENST00000409470 IFIT1BQ5T764 474 aaKnown RBP24.06■■□□□ 1.44
USP39-203ENST00000409470 ENAHQ8N8S7 591 aaPredicted RBP24.06■■□□□ 1.44
USP39-203ENST00000409470 FANCBQ8NB91 859 aa24.06■■□□□ 1.44
USP39-203ENST00000409470 TNMDQ9H2S6 317 aa24.06■■□□□ 1.44
USP39-203ENST00000409470 RTN4Q9NQC3 1192 aaKnown RBP24.06■■□□□ 1.44
USP39-203ENST00000409470 NR1I2O75469 434 aa24.05■■□□□ 1.44
USP39-203ENST00000409470 ME1P48163 572 aa24.05■■□□□ 1.44
USP39-203ENST00000409470 EVX2Q03828 476 aa24.05■■□□□ 1.44
USP39-203ENST00000409470 MYSM1Q5VVJ2 828 aa24.05■■□□□ 1.44
USP39-203ENST00000409470 SH3RF3Q8TEJ3 882 aaPredicted RBP24.05■■□□□ 1.44
USP39-203ENST00000409470 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.05■■□□□ 1.44
USP39-203ENST00000409470 ORC4O43929 436 aa24.05■■□□□ 1.44
USP39-203ENST00000409470 PARP3Q9Y6F1 533 aa24.05■■□□□ 1.44
USP39-203ENST00000409470 LAMB1P07942 1786 aa24.04■■□□□ 1.44
USP39-203ENST00000409470 PDE4BQ07343 736 aa24.04■■□□□ 1.44
USP39-203ENST00000409470 CCAR1Q8IX12 1150 aaKnown RBP24.04■■□□□ 1.44
USP39-203ENST00000409470 FUCA2Q9BTY2 467 aa24.04■■□□□ 1.44
USP39-203ENST00000409470 CLSTN2Q9H4D0 955 aa24.04■■□□□ 1.44
USP39-203ENST00000409470 MMP10P09238 476 aa24.03■■□□□ 1.44
USP39-203ENST00000409470 USP17L8P0C7I0 530 aa24.03■■□□□ 1.44
USP39-203ENST00000409470 NPR1P16066 1061 aa24.03■■□□□ 1.44
USP39-203ENST00000409470 STK38Q15208 465 aa24.03■■□□□ 1.44
USP39-203ENST00000409470 SF3A1Q15459 793 aaKnown RBP24.03■■□□□ 1.44
USP39-203ENST00000409470 CATIPQ7Z7H3 387 aa24.03■■□□□ 1.44
USP39-203ENST00000409470 CCDC82Q8N4S0 544 aa24.03■■□□□ 1.44
USP39-203ENST00000409470 ATP6V0A2Q9Y487 856 aa24.03■■□□□ 1.44
USP39-203ENST00000409470 CLIC4Q9Y696 253 aa24.03■■□□□ 1.44
USP39-203ENST00000409470 ANKRD31Q8N7Z5 1873 aa24.03■■□□□ 1.44
USP39-203ENST00000409470 MROH7-TTC4A0A0A0MT08 1334 aa24.03■■□□□ 1.44
USP39-203ENST00000409470 CCDC192P0DO97 292 aa24.03■■□□□ 1.44
USP39-203ENST00000409470 SRGNP10124 158 aa24.03■■□□□ 1.44
USP39-203ENST00000409470 SLC4A8Q2Y0W8 1093 aa24.03■■□□□ 1.44
USP39-203ENST00000409470 ECM29Q5VYK3 1845 aa24.03■■□□□ 1.44
USP39-203ENST00000409470 UBE2Q2LH0YL09 131 aa24.02■■□□□ 1.44
USP39-203ENST00000409470 PPP4CP60510 307 aa24.02■■□□□ 1.44
USP39-203ENST00000409470 PPP2R5BQ15173 497 aa24.02■■□□□ 1.44
USP39-203ENST00000409470 CMTR1Q8N1G2 835 aaKnown RBP24.02■■□□□ 1.44
USP39-203ENST00000409470 CRACR2BQ8N4Y2 399 aaPredicted RBP24.02■■□□□ 1.44
USP39-203ENST00000409470 POLR3EQ9NVU0 708 aa24.02■■□□□ 1.44
USP39-203ENST00000409470 PDE6BP35913 854 aa24.01■■□□□ 1.43
USP39-203ENST00000409470 FAM47AQ5JRC9 791 aa24.01■■□□□ 1.43
USP39-203ENST00000409470 MFSD14BQ5SR56 506 aa24.01■■□□□ 1.43
USP39-203ENST00000409470 CCDC73Q6ZRK6 1079 aa24.01■■□□□ 1.43
USP39-203ENST00000409470 AMOTL1Q8IY63 956 aa24.01■■□□□ 1.43
USP39-203ENST00000409470 LINC00301Q8NCQ3 95 aa24.01■■□□□ 1.43
USP39-203ENST00000409470 KCNG4Q8TDN1 519 aa24.01■■□□□ 1.43
USP39-203ENST00000409470 LRRC37AA6NMS7 1700 aa24.01■■□□□ 1.43
USP39-203ENST00000409470 YEATS4O95619 227 aa24.01■■□□□ 1.43
USP39-203ENST00000409470 NBPF11Q86T75 865 aa24.01■■□□□ 1.43
USP39-203ENST00000409470 CKAP2LQ8IYA6 745 aa24.01■■□□□ 1.43
USP39-203ENST00000409470 FAM43AQ8N2R8 423 aa24.01■■□□□ 1.43
USP39-203ENST00000409470 TBC1D22AQ8WUA7 517 aa24.01■■□□□ 1.43
USP39-203ENST00000409470 NRXN2Q9P2S2 1712 aa24■■□□□ 1.43
USP39-203ENST00000409470 RIMBP2O15034 1052 aa24■■□□□ 1.43
USP39-203ENST00000409470 DEXIO95424 95 aa24■■□□□ 1.43
USP39-203ENST00000409470 ALDH1B1P30837 517 aa24■■□□□ 1.43
USP39-203ENST00000409470 GUCY1A2P33402 732 aa24■■□□□ 1.43
USP39-203ENST00000409470 UVSSAQ2YD98 709 aa24■■□□□ 1.43
USP39-203ENST00000409470 C12orf60Q5U649 245 aa24■■□□□ 1.43
USP39-203ENST00000409470 MSL1Q68DK7 614 aa24■■□□□ 1.43
USP39-203ENST00000409470 TGFBRAP1Q8WUH2 860 aa24■■□□□ 1.43
USP39-203ENST00000409470 RTFDC1Q9BY42 306 aaPredicted RBP24■■□□□ 1.43
USP39-203ENST00000409470 MKRN1Q9UHC7 482 aaKnown RBP24■■□□□ 1.43
USP39-203ENST00000409470 PCDHA7Q9UN72 937 aa24■■□□□ 1.43
USP39-203ENST00000409470 TSPY2A6NKD2 308 aa24■■□□□ 1.43
USP39-203ENST00000409470 ANO1Q5XXA6 986 aa24■■□□□ 1.43
USP39-203ENST00000409470 CERS3Q8IU89 383 aa24■■□□□ 1.43
USP39-203ENST00000409470 CALM1P0DP23 149 aa23.99■■□□□ 1.43
USP39-203ENST00000409470 CALM2P0DP24 149 aa23.99■■□□□ 1.43
USP39-203ENST00000409470 CALM3P0DP25 149 aa23.99■■□□□ 1.43
USP39-203ENST00000409470 BTDP43251 543 aa23.99■■□□□ 1.43
USP39-203ENST00000409470 FSIP1Q8NA03 581 aa23.99■■□□□ 1.43
USP39-203ENST00000409470 TMX4Q9H1E5 349 aaPredicted RBP23.99■■□□□ 1.43
USP39-203ENST00000409470 GOLPH3LQ9H4A5 285 aa23.99■■□□□ 1.43
USP39-203ENST00000409470 SPTLC2O15270 562 aa23.98■■□□□ 1.43
USP39-203ENST00000409470 AKAP17AQ02040 695 aaKnown RBP23.98■■□□□ 1.43
USP39-203ENST00000409470 SAFBQ15424 915 aaKnown RBP eCLIP23.98■■□□□ 1.43
USP39-203ENST00000409470 SLF2Q8IX21 1173 aa23.98■■□□□ 1.43
USP39-203ENST00000409470 MPNDQ8N594 471 aa23.98■■□□□ 1.43
USP39-203ENST00000409470 LTBP1Q14766 1721 aa23.98■■□□□ 1.43
USP39-203ENST00000409470 NMT2O60551 498 aa23.98■■□□□ 1.43
USP39-203ENST00000409470 ADALQ6DHV7 355 aa23.98■■□□□ 1.43
USP39-203ENST00000409470 PDLIM2Q96JY6 352 aa23.98■■□□□ 1.43
USP39-203ENST00000409470 RBM28Q9NW13 759 aaKnown RBP23.98■■□□□ 1.43
USP39-203ENST00000409470 DDAH1O94760 285 aa23.97■■□□□ 1.43
USP39-203ENST00000409470 U2AF2P26368 475 aaKnown RBP eCLIP23.97■■□□□ 1.43
USP39-203ENST00000409470 MAPKAPK5Q8IW41 473 aa23.97■■□□□ 1.43
USP39-203ENST00000409470 MASTLQ96GX5 879 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms