RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 HLA-DOAP06340 250 aa16.78■□□□□ 0.28
CHRNA1-204ENST00000409323 NECTIN1Q15223 517 aa16.78■□□□□ 0.28
CHRNA1-204ENST00000409323 CREB3L3Q68CJ9 461 aa16.78■□□□□ 0.28
CHRNA1-204ENST00000409323 CHADLQ6NUI6 762 aa16.78■□□□□ 0.28
CHRNA1-204ENST00000409323 AMOTL1Q8IY63 956 aa16.78■□□□□ 0.28
CHRNA1-204ENST00000409323 RASEFQ8IZ41 740 aa16.78■□□□□ 0.28
CHRNA1-204ENST00000409323 CRACR2BQ8N4Y2 399 aaPredicted RBP16.78■□□□□ 0.28
CHRNA1-204ENST00000409323 NKX2-3Q8TAU0 364 aa16.78■□□□□ 0.28
CHRNA1-204ENST00000409323 DNAJC18Q9H819 358 aa16.78■□□□□ 0.28
CHRNA1-204ENST00000409323 ATRNL1Q5VV63 1379 aa16.78■□□□□ 0.28
CHRNA1-204ENST00000409323 ZNF213O14771 459 aa16.77■□□□□ 0.28
CHRNA1-204ENST00000409323 NPM3O75607 178 aaKnown RBP16.77■□□□□ 0.28
CHRNA1-204ENST00000409323 COL9A3Q14050 684 aaPredicted RBP16.77■□□□□ 0.28
CHRNA1-204ENST00000409323 IMMTQ16891 758 aaKnown RBP16.77■□□□□ 0.28
CHRNA1-204ENST00000409323 SHROOM1Q2M3G4 852 aaPredicted RBP16.77■□□□□ 0.28
CHRNA1-204ENST00000409323 SBK1Q52WX2 424 aa16.77■□□□□ 0.28
CHRNA1-204ENST00000409323 RRP12Q5JTH9 1297 aaKnown RBP16.77■□□□□ 0.28
CHRNA1-204ENST00000409323 MOB2Q70IA6 237 aa16.77■□□□□ 0.28
CHRNA1-204ENST00000409323 TTC6Q86TZ1 520 aa16.77■□□□□ 0.28
CHRNA1-204ENST00000409323 TOMM22Q9NS69 142 aa16.77■□□□□ 0.28
CHRNA1-204ENST00000409323 PI4KBQ9UBF8 816 aa16.77■□□□□ 0.28
CHRNA1-204ENST00000409323 CTNNA3Q9UI47 895 aa16.77■□□□□ 0.28
CHRNA1-204ENST00000409323 MYH8P13535 1937 aa16.77■□□□□ 0.27
CHRNA1-204ENST00000409323 STOX1Q6ZVD7 989 aa16.77■□□□□ 0.27
CHRNA1-204ENST00000409323 DHX36Q9H2U1 1008 aaKnown RBP16.77■□□□□ 0.27
CHRNA1-204ENST00000409323 TRIM34Q9BYJ4 488 aa16.76■□□□□ 0.27
CHRNA1-204ENST00000409323 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.76■□□□□ 0.27
CHRNA1-204ENST00000409323 SERPINB13Q9UIV8 391 aa16.76■□□□□ 0.27
CHRNA1-204ENST00000409323 ZMYM6O95789 1325 aa16.76■□□□□ 0.27
CHRNA1-204ENST00000409323 NEDD4P46934 1319 aa16.76■□□□□ 0.27
CHRNA1-204ENST00000409323 HSPA4P34932 840 aa16.75■□□□□ 0.27
CHRNA1-204ENST00000409323 CDK8P49336 464 aa16.75■□□□□ 0.27
CHRNA1-204ENST00000409323 RRP1BQ14684 758 aaKnown RBP16.75■□□□□ 0.27
CHRNA1-204ENST00000409323 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.75■□□□□ 0.27
CHRNA1-204ENST00000409323 PPP2R3BQ9Y5P8 575 aa16.75■□□□□ 0.27
CHRNA1-204ENST00000409323 COL2A1P02458 1487 aaPredicted RBP16.75■□□□□ 0.27
CHRNA1-204ENST00000409323 GDF11O95390 407 aa16.74■□□□□ 0.27
CHRNA1-204ENST00000409323 ITGBL1O95965 494 aaPredicted RBP16.74■□□□□ 0.27
CHRNA1-204ENST00000409323 GABPAQ06546 454 aa16.74■□□□□ 0.27
CHRNA1-204ENST00000409323 TTLL12Q14166 644 aaPredicted RBP16.74■□□□□ 0.27
CHRNA1-204ENST00000409323 ADCK5Q3MIX3 580 aa16.74■□□□□ 0.27
CHRNA1-204ENST00000409323 SNX14Q9Y5W7 946 aa16.74■□□□□ 0.27
CHRNA1-204ENST00000409323 E7EWF7 191 aa16.73■□□□□ 0.27
CHRNA1-204ENST00000409323 CPA1P15085 419 aa16.73■□□□□ 0.27
CHRNA1-204ENST00000409323 SHMT1P34896 483 aa16.73■□□□□ 0.27
CHRNA1-204ENST00000409323 FAM47AQ5JRC9 791 aa16.73■□□□□ 0.27
CHRNA1-204ENST00000409323 AKNAD1Q5T1N1 836 aa16.73■□□□□ 0.27
CHRNA1-204ENST00000409323 C16orf86Q6ZW13 317 aa16.73■□□□□ 0.27
CHRNA1-204ENST00000409323 C22orf23Q9BZE7 217 aa16.73■□□□□ 0.27
CHRNA1-204ENST00000409323 B4E1Z4 1266 aa16.72■□□□□ 0.27
CHRNA1-204ENST00000409323 CELF2O95319 508 aaKnown RBP16.72■□□□□ 0.27
CHRNA1-204ENST00000409323 SUPT20HL1Q3ZLR7 823 aa16.72■□□□□ 0.27
CHRNA1-204ENST00000409323 MFSD6Q6ZSS7 791 aa16.72■□□□□ 0.27
CHRNA1-204ENST00000409323 CHST3Q7LGC8 479 aa16.72■□□□□ 0.27
CHRNA1-204ENST00000409323 SMC1BQ8NDV3 1235 aa16.72■□□□□ 0.27
CHRNA1-204ENST00000409323 MKNK2Q9HBH9 465 aa16.72■□□□□ 0.27
CHRNA1-204ENST00000409323 ANAPC4Q9UJX5 808 aa16.72■□□□□ 0.27
CHRNA1-204ENST00000409323 ROBO3Q96MS0 1386 aa16.72■□□□□ 0.27
CHRNA1-204ENST00000409323 RANBP6O60518 1105 aaKnown RBP16.72■□□□□ 0.27
CHRNA1-204ENST00000409323 TOMM70O94826 608 aa16.72■□□□□ 0.27
CHRNA1-204ENST00000409323 MCCP23508 829 aa16.72■□□□□ 0.27
CHRNA1-204ENST00000409323 INPP5BP32019 993 aa16.72■□□□□ 0.27
CHRNA1-204ENST00000409323 JAG1P78504 1218 aa16.72■□□□□ 0.27
CHRNA1-204ENST00000409323 RNF20Q5VTR2 975 aa16.72■□□□□ 0.27
CHRNA1-204ENST00000409323 CCDC84Q86UT8 332 aaPredicted RBP16.72■□□□□ 0.27
CHRNA1-204ENST00000409323 CLEC10AQ8IUN9 316 aa16.72■□□□□ 0.27
CHRNA1-204ENST00000409323 FOXP4Q8IVH2 680 aaPredicted RBP16.72■□□□□ 0.27
CHRNA1-204ENST00000409323 STAG1Q8WVM7 1258 aa16.72■□□□□ 0.27
CHRNA1-204ENST00000409323 TCEANC2Q96MN5 208 aa16.72■□□□□ 0.27
CHRNA1-204ENST00000409323 EHD4Q9H223 541 aa16.72■□□□□ 0.27
CHRNA1-204ENST00000409323 UPF2Q9HAU5 1272 aaKnown RBP16.72■□□□□ 0.27
CHRNA1-204ENST00000409323 ANGEL1Q9UNK9 670 aaKnown RBP16.72■□□□□ 0.27
CHRNA1-204ENST00000409323 MPHOSPH10O00566 681 aaKnown RBP16.71■□□□□ 0.27
CHRNA1-204ENST00000409323 USP2O75604 605 aaPredicted RBP16.71■□□□□ 0.27
CHRNA1-204ENST00000409323 SLC3A2P08195 630 aaKnown RBP16.71■□□□□ 0.27
CHRNA1-204ENST00000409323 AKR1B1P15121 316 aa16.71■□□□□ 0.27
CHRNA1-204ENST00000409323 RASA1P20936 1047 aa16.71■□□□□ 0.27
CHRNA1-204ENST00000409323 NF2P35240 595 aa16.71■□□□□ 0.27
CHRNA1-204ENST00000409323 PDE4BQ07343 736 aa16.71■□□□□ 0.27
CHRNA1-204ENST00000409323 ZKSCAN4Q969J2 545 aaPredicted RBP16.71■□□□□ 0.27
CHRNA1-204ENST00000409323 WRNIP1Q96S55 665 aa16.71■□□□□ 0.27
CHRNA1-204ENST00000409323 ZKSCAN3Q9BRR0 538 aa16.71■□□□□ 0.27
CHRNA1-204ENST00000409323 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.71■□□□□ 0.27
CHRNA1-204ENST00000409323 OTOFQ9HC10 1997 aa16.71■□□□□ 0.27
CHRNA1-204ENST00000409323 TRPM7Q96QT4 1865 aa16.71■□□□□ 0.27
CHRNA1-204ENST00000409323 ATAD5Q96QE3 1844 aa16.7■□□□□ 0.26
CHRNA1-204ENST00000409323 UBE2Q2LH0YL09 131 aa16.7■□□□□ 0.26
CHRNA1-204ENST00000409323 KDM4AO75164 1064 aa16.7■□□□□ 0.26
CHRNA1-204ENST00000409323 ZKSCAN1P17029 563 aaPredicted RBP16.7■□□□□ 0.26
CHRNA1-204ENST00000409323 CST9Q5W186 159 aa16.7■□□□□ 0.26
CHRNA1-204ENST00000409323 DCAF15Q66K64 600 aa16.7■□□□□ 0.26
CHRNA1-204ENST00000409323 JAKMIP1Q96N16 626 aaKnown RBP16.7■□□□□ 0.26
CHRNA1-204ENST00000409323 ZNF341Q9BYN7 854 aa16.7■□□□□ 0.26
CHRNA1-204ENST00000409323 HERC5Q9UII4 1024 aaKnown RBP16.7■□□□□ 0.26
CHRNA1-204ENST00000409323 PHF20L1A8MW92 1017 aa16.69■□□□□ 0.26
CHRNA1-204ENST00000409323 NMT2O60551 498 aa16.69■□□□□ 0.26
CHRNA1-204ENST00000409323 CERKLQ49MI3 558 aaPredicted RBP16.69■□□□□ 0.26
CHRNA1-204ENST00000409323 CYB5R4Q7L1T6 521 aa16.69■□□□□ 0.26
CHRNA1-204ENST00000409323 METTL16Q86W50 562 aaKnown RBP16.69■□□□□ 0.26
CHRNA1-204ENST00000409323 RBM46Q8TBY0 533 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms