RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 IGF2BP3O00425 579 aaKnown RBP eCLIP21.67■■□□□ 1.06
PDLIM2-206ENST00000409141 UBE3CQ15386 1083 aa21.67■■□□□ 1.06
PDLIM2-206ENST00000409141 FOXP4Q8IVH2 680 aaPredicted RBP21.67■■□□□ 1.06
PDLIM2-206ENST00000409141 KBTBD3Q8NAB2 608 aa21.67■■□□□ 1.06
PDLIM2-206ENST00000409141 PI4K2BQ8TCG2 481 aa21.67■■□□□ 1.06
PDLIM2-206ENST00000409141 HERC5Q9UII4 1024 aaKnown RBP21.67■■□□□ 1.06
PDLIM2-206ENST00000409141 CCL15-CCL14A0A0B4J2E2 113 aa21.66■■□□□ 1.06
PDLIM2-206ENST00000409141 CHGBP05060 677 aa21.66■■□□□ 1.06
PDLIM2-206ENST00000409141 HLA-DOAP06340 250 aa21.66■■□□□ 1.06
PDLIM2-206ENST00000409141 SNAPC2Q13487 334 aa21.66■■□□□ 1.06
PDLIM2-206ENST00000409141 CCL15Q16663 113 aa21.66■■□□□ 1.06
PDLIM2-206ENST00000409141 LCORLQ8N3X6 602 aa21.66■■□□□ 1.06
PDLIM2-206ENST00000409141 PTPN18Q99952 460 aa21.66■■□□□ 1.06
PDLIM2-206ENST00000409141 TRIM34Q9BYJ4 488 aa21.66■■□□□ 1.06
PDLIM2-206ENST00000409141 ARMT1Q9H993 441 aa21.66■■□□□ 1.06
PDLIM2-206ENST00000409141 CETPP11597 493 aa21.65■■□□□ 1.06
PDLIM2-206ENST00000409141 SLC4A8Q2Y0W8 1093 aa21.65■■□□□ 1.06
PDLIM2-206ENST00000409141 CRACR2BQ8N4Y2 399 aaPredicted RBP21.65■■□□□ 1.06
PDLIM2-206ENST00000409141 BRI3BPQ8WY22 251 aa21.65■■□□□ 1.06
PDLIM2-206ENST00000409141 LNPKQ9C0E8 428 aa21.65■■□□□ 1.06
PDLIM2-206ENST00000409141 SALL3Q9BXA9 1300 aa21.65■■□□□ 1.06
PDLIM2-206ENST00000409141 MBD4O95243 580 aa21.64■■□□□ 1.06
PDLIM2-206ENST00000409141 PTPRAP18433 802 aa21.64■■□□□ 1.06
PDLIM2-206ENST00000409141 ZHX2Q9Y6X8 837 aa21.64■■□□□ 1.06
PDLIM2-206ENST00000409141 TTC6Q86TZ1 520 aa21.64■■□□□ 1.05
PDLIM2-206ENST00000409141 TNS4Q8IZW8 715 aa21.64■■□□□ 1.05
PDLIM2-206ENST00000409141 STAP2Q9UGK3 403 aa21.64■■□□□ 1.05
PDLIM2-206ENST00000409141 CDK5RAP2Q96SN8 1893 aa21.63■■□□□ 1.05
PDLIM2-206ENST00000409141 RNF113AO15541 343 aaKnown RBP21.63■■□□□ 1.05
PDLIM2-206ENST00000409141 PDE1AP54750 535 aa21.63■■□□□ 1.05
PDLIM2-206ENST00000409141 METTL16Q86W50 562 aaKnown RBP21.63■■□□□ 1.05
PDLIM2-206ENST00000409141 CHD1LQ86WJ1 897 aa21.63■■□□□ 1.05
PDLIM2-206ENST00000409141 SDR42E1Q8WUS8 393 aa21.63■■□□□ 1.05
PDLIM2-206ENST00000409141 CFHR5Q9BXR6 569 aa21.63■■□□□ 1.05
PDLIM2-206ENST00000409141 KCNH4Q9UQ05 1017 aa21.63■■□□□ 1.05
PDLIM2-206ENST00000409141 FOCADQ5VW36 1801 aa21.62■■□□□ 1.05
PDLIM2-206ENST00000409141 POLR3DP05423 398 aaPredicted RBP21.62■■□□□ 1.05
PDLIM2-206ENST00000409141 ZFYP08048 801 aaPredicted RBP21.62■■□□□ 1.05
PDLIM2-206ENST00000409141 CAP2P40123 477 aa21.62■■□□□ 1.05
PDLIM2-206ENST00000409141 NUCB1Q02818 461 aa21.62■■□□□ 1.05
PDLIM2-206ENST00000409141 LRRFIP1Q32MZ4 808 aaKnown RBP21.62■■□□□ 1.05
PDLIM2-206ENST00000409141 PUS7LQ9H0K6 701 aaKnown RBP21.62■■□□□ 1.05
PDLIM2-206ENST00000409141 R3HDMLQ9H3Y0 253 aa21.62■■□□□ 1.05
PDLIM2-206ENST00000409141 MCM9Q9NXL9 1143 aa21.62■■□□□ 1.05
PDLIM2-206ENST00000409141 CXCL11O14625 94 aa21.61■■□□□ 1.05
PDLIM2-206ENST00000409141 PRKAB2O43741 272 aa21.61■■□□□ 1.05
PDLIM2-206ENST00000409141 RRP1BQ14684 758 aaKnown RBP21.61■■□□□ 1.05
PDLIM2-206ENST00000409141 FSD1Q9BTV5 496 aa21.61■■□□□ 1.05
PDLIM2-206ENST00000409141 DNAJC18Q9H819 358 aa21.61■■□□□ 1.05
PDLIM2-206ENST00000409141 DCP1AQ9NPI6 582 aaPredicted RBP21.61■■□□□ 1.05
PDLIM2-206ENST00000409141 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.6■■□□□ 1.05
PDLIM2-206ENST00000409141 AFG3L2Q9Y4W6 797 aa21.6■■□□□ 1.05
PDLIM2-206ENST00000409141 CASP8AP2Q9UKL3 1982 aa21.6■■□□□ 1.05
PDLIM2-206ENST00000409141 GPR25O00155 361 aa21.59■■□□□ 1.05
PDLIM2-206ENST00000409141 PLCD1P51178 756 aa21.59■■□□□ 1.05
PDLIM2-206ENST00000409141 CCDC84Q86UT8 332 aaPredicted RBP21.59■■□□□ 1.05
PDLIM2-206ENST00000409141 FAM43AQ8N2R8 423 aa21.59■■□□□ 1.05
PDLIM2-206ENST00000409141 APPBP2Q92624 585 aa21.59■■□□□ 1.05
PDLIM2-206ENST00000409141 EHD4Q9H223 541 aa21.59■■□□□ 1.05
PDLIM2-206ENST00000409141 ATP8A2Q9NTI2 1148 aa21.59■■□□□ 1.05
PDLIM2-206ENST00000409141 SERPINB13Q9UIV8 391 aa21.59■■□□□ 1.05
PDLIM2-206ENST00000409141 SLC4A4Q9Y6R1 1079 aa21.59■■□□□ 1.05
PDLIM2-206ENST00000409141 MYH1P12882 1939 aa21.58■■□□□ 1.05
PDLIM2-206ENST00000409141 BTBD19C9JJ37 291 aa21.58■■□□□ 1.05
PDLIM2-206ENST00000409141 CRHR2Q13324 411 aa21.58■■□□□ 1.05
PDLIM2-206ENST00000409141 ZNF296Q8WUU4 475 aaPredicted RBP21.58■■□□□ 1.05
PDLIM2-206ENST00000409141 OSBP2Q969R2 916 aa21.58■■□□□ 1.05
PDLIM2-206ENST00000409141 DDRGK1Q96HY6 314 aa21.58■■□□□ 1.05
PDLIM2-206ENST00000409141 LAMB1P07942 1786 aa21.58■■□□□ 1.05
PDLIM2-206ENST00000409141 TRIM75PA6NK02 468 aa21.58■■□□□ 1.04
PDLIM2-206ENST00000409141 TAF1CQ15572 869 aaPredicted RBP21.58■■□□□ 1.04
PDLIM2-206ENST00000409141 NOM1Q5C9Z4 860 aaKnown RBP21.58■■□□□ 1.04
PDLIM2-206ENST00000409141 STRBPQ96SI9 672 aaKnown RBP21.58■■□□□ 1.04
PDLIM2-206ENST00000409141 MYH7P12883 1935 aa21.57■■□□□ 1.04
PDLIM2-206ENST00000409141 SIPA1L1O43166 1804 aa21.57■■□□□ 1.04
PDLIM2-206ENST00000409141 USP17L5A8MUK1 530 aa21.57■■□□□ 1.04
PDLIM2-206ENST00000409141 GDF11O95390 407 aa21.57■■□□□ 1.04
PDLIM2-206ENST00000409141 EVI5LQ96CN4 794 aa21.57■■□□□ 1.04
PDLIM2-206ENST00000409141 ZFYVE28Q9HCC9 887 aa21.57■■□□□ 1.04
PDLIM2-206ENST00000409141 FKTNO75072 461 aa21.56■■□□□ 1.04
PDLIM2-206ENST00000409141 ASNSP08243 561 aa21.56■■□□□ 1.04
PDLIM2-206ENST00000409141 TATDN1Q6P1N9 297 aa21.56■■□□□ 1.04
PDLIM2-206ENST00000409141 ANKRD23Q86SG2 305 aa21.56■■□□□ 1.04
PDLIM2-206ENST00000409141 ZCCHC17Q9NP64 241 aaKnown RBP21.56■■□□□ 1.04
PDLIM2-206ENST00000409141 DOCK1Q14185 1865 aa21.55■■□□□ 1.04
PDLIM2-206ENST00000409141 A0A0G2JLL6 359 aaPredicted RBP21.55■■□□□ 1.04
PDLIM2-206ENST00000409141 CYP2D6P10635 497 aa21.55■■□□□ 1.04
PDLIM2-206ENST00000409141 JAG1P78504 1218 aa21.55■■□□□ 1.04
PDLIM2-206ENST00000409141 SPP2Q13103 211 aa21.55■■□□□ 1.04
PDLIM2-206ENST00000409141 MOGSQ13724 837 aa21.55■■□□□ 1.04
PDLIM2-206ENST00000409141 FASTKD5Q7L8L6 764 aaKnown RBP21.55■■□□□ 1.04
PDLIM2-206ENST00000409141 PRRT2Q7Z6L0 340 aaPredicted RBP21.55■■□□□ 1.04
PDLIM2-206ENST00000409141 PLEKHM2Q8IWE5 1019 aa21.55■■□□□ 1.04
PDLIM2-206ENST00000409141 AMOTL1Q8IY63 956 aa21.55■■□□□ 1.04
PDLIM2-206ENST00000409141 ZNF280CQ8ND82 737 aa21.55■■□□□ 1.04
PDLIM2-206ENST00000409141 TBC1D2Q9BYX2 928 aa21.55■■□□□ 1.04
PDLIM2-206ENST00000409141 AS3MTQ9HBK9 375 aa21.55■■□□□ 1.04
PDLIM2-206ENST00000409141 GINM1Q9NU53 330 aa21.55■■□□□ 1.04
PDLIM2-206ENST00000409141 USP17L12C9JPN9 530 aa21.54■■□□□ 1.04
PDLIM2-206ENST00000409141 USP17L21D6R901 530 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms