RNA–Protein interactions for RNA: ENST00000408968.3

IFITM1-202, Transcript of interferon induced transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFITM1, Length 855 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM1-202ENST00000408968 HDAC1Q13547 482 aaPredicted RBP16.12■□□□□ 0.17
IFITM1-202ENST00000408968 SLC9C2Q5TAH2 1124 aa16.12■□□□□ 0.17
IFITM1-202ENST00000408968 SH3BP5LQ7L8J4 393 aa16.12■□□□□ 0.17
IFITM1-202ENST00000408968 ADGRA1Q86SQ6 560 aa16.12■□□□□ 0.17
IFITM1-202ENST00000408968 ZFPM1Q8IX07 1006 aa16.12■□□□□ 0.17
IFITM1-202ENST00000408968 MS4A4AQ96JQ5 239 aa16.12■□□□□ 0.17
IFITM1-202ENST00000408968 CRNKL1Q9BZJ0 848 aaKnown RBP16.12■□□□□ 0.17
IFITM1-202ENST00000408968 ANTXR1Q9H6X2 564 aa16.12■□□□□ 0.17
IFITM1-202ENST00000408968 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.12■□□□□ 0.17
IFITM1-202ENST00000408968 KCNH4Q9UQ05 1017 aa16.12■□□□□ 0.17
IFITM1-202ENST00000408968 PCDHB15Q9Y5E8 787 aa16.12■□□□□ 0.17
IFITM1-202ENST00000408968 MAGEB6P1A0A0J9YX57 407 aa16.11■□□□□ 0.17
IFITM1-202ENST00000408968 PHF20L1A8MW92 1017 aa16.11■□□□□ 0.17
IFITM1-202ENST00000408968 IGF2BP3O00425 579 aaKnown RBP eCLIP16.11■□□□□ 0.17
IFITM1-202ENST00000408968 CXCL11O14625 94 aa16.11■□□□□ 0.17
IFITM1-202ENST00000408968 USP5P45974 858 aa16.11■□□□□ 0.17
IFITM1-202ENST00000408968 TGFBRAP1Q8WUH2 860 aa16.11■□□□□ 0.17
IFITM1-202ENST00000408968 GPR25O00155 361 aa16.1■□□□□ 0.17
IFITM1-202ENST00000408968 IRF6O14896 467 aa16.1■□□□□ 0.17
IFITM1-202ENST00000408968 FKTNO75072 461 aa16.1■□□□□ 0.17
IFITM1-202ENST00000408968 PKN2Q16513 984 aaKnown RBP16.1■□□□□ 0.17
IFITM1-202ENST00000408968 SAMD1Q6SPF0 538 aaPredicted RBP16.1■□□□□ 0.17
IFITM1-202ENST00000408968 CTU1Q7Z7A3 348 aaKnown RBP16.1■□□□□ 0.17
IFITM1-202ENST00000408968 FOXP4Q8IVH2 680 aaPredicted RBP16.1■□□□□ 0.17
IFITM1-202ENST00000408968 MAPKAPK5Q8IW41 473 aa16.1■□□□□ 0.17
IFITM1-202ENST00000408968 CRACR2BQ8N4Y2 399 aaPredicted RBP16.1■□□□□ 0.17
IFITM1-202ENST00000408968 BRI3BPQ8WY22 251 aa16.1■□□□□ 0.17
IFITM1-202ENST00000408968 BCL11AQ9H165 835 aa16.1■□□□□ 0.17
IFITM1-202ENST00000408968 BOLA2Q9H3K6 86 aa16.1■□□□□ 0.17
IFITM1-202ENST00000408968 ZFYVE28Q9HCC9 887 aa16.1■□□□□ 0.17
IFITM1-202ENST00000408968 NDUFB9Q9Y6M9 179 aa16.1■□□□□ 0.17
IFITM1-202ENST00000408968 SMARCA5O60264 1052 aaPredicted RBP16.09■□□□□ 0.17
IFITM1-202ENST00000408968 TBC1D8O95759 1140 aa16.09■□□□□ 0.17
IFITM1-202ENST00000408968 ARHGEF6Q15052 776 aa16.09■□□□□ 0.17
IFITM1-202ENST00000408968 UBE3CQ15386 1083 aa16.09■□□□□ 0.17
IFITM1-202ENST00000408968 TAF1CQ15572 869 aaPredicted RBP16.09■□□□□ 0.17
IFITM1-202ENST00000408968 FASTKD5Q7L8L6 764 aaKnown RBP16.09■□□□□ 0.17
IFITM1-202ENST00000408968 TTC6Q86TZ1 520 aa16.09■□□□□ 0.17
IFITM1-202ENST00000408968 METTL16Q86W50 562 aaKnown RBP16.09■□□□□ 0.17
IFITM1-202ENST00000408968 MIGA1Q8NAN2 632 aa16.09■□□□□ 0.17
IFITM1-202ENST00000408968 DDRGK1Q96HY6 314 aa16.09■□□□□ 0.17
IFITM1-202ENST00000408968 RIOK1Q9BRS2 568 aaKnown RBP16.09■□□□□ 0.17
IFITM1-202ENST00000408968 EHD4Q9H223 541 aa16.09■□□□□ 0.17
IFITM1-202ENST00000408968 ZNF532Q9HCE3 1301 aa16.09■□□□□ 0.17
IFITM1-202ENST00000408968 GLRX3O76003 335 aaKnown RBP16.08■□□□□ 0.16
IFITM1-202ENST00000408968 ZFYP08048 801 aaPredicted RBP16.08■□□□□ 0.16
IFITM1-202ENST00000408968 ASNSP08243 561 aa16.08■□□□□ 0.16
IFITM1-202ENST00000408968 PTPRAP18433 802 aa16.08■□□□□ 0.16
IFITM1-202ENST00000408968 ADD2P35612 726 aa16.08■□□□□ 0.16
IFITM1-202ENST00000408968 DGKZQ13574 1117 aa16.08■□□□□ 0.16
IFITM1-202ENST00000408968 ANKRD23Q86SG2 305 aa16.08■□□□□ 0.16
IFITM1-202ENST00000408968 AMOTL1Q8IY63 956 aa16.08■□□□□ 0.16
IFITM1-202ENST00000408968 ZNF296Q8WUU4 475 aaPredicted RBP16.08■□□□□ 0.16
IFITM1-202ENST00000408968 ERO1AQ96HE7 468 aa16.08■□□□□ 0.16
IFITM1-202ENST00000408968 RWDD1Q9H446 243 aaPredicted RBP16.08■□□□□ 0.16
IFITM1-202ENST00000408968 AS3MTQ9HBK9 375 aa16.08■□□□□ 0.16
IFITM1-202ENST00000408968 TCRBV5S4A2TA0A5A2 114 aa16.07■□□□□ 0.16
IFITM1-202ENST00000408968 DYNLL1P63167 89 aaKnown RBP16.07■□□□□ 0.16
IFITM1-202ENST00000408968 CRHR2Q13324 411 aa16.07■□□□□ 0.16
IFITM1-202ENST00000408968 SLC45A1Q9Y2W3 748 aa16.07■□□□□ 0.16
IFITM1-202ENST00000408968 BAZ2AQ9UIF9 1905 aaKnown RBP16.07■□□□□ 0.16
IFITM1-202ENST00000408968 A0A0G2JLL6 359 aaPredicted RBP16.06■□□□□ 0.16
IFITM1-202ENST00000408968 MX1P20591 662 aa16.06■□□□□ 0.16
IFITM1-202ENST00000408968 CAP2P40123 477 aa16.06■□□□□ 0.16
IFITM1-202ENST00000408968 PRRT2Q7Z6L0 340 aaPredicted RBP16.06■□□□□ 0.16
IFITM1-202ENST00000408968 KBTBD3Q8NAB2 608 aa16.06■□□□□ 0.16
IFITM1-202ENST00000408968 PARK7Q99497 189 aaKnown RBP16.06■□□□□ 0.16
IFITM1-202ENST00000408968 PTPN18Q99952 460 aa16.06■□□□□ 0.16
IFITM1-202ENST00000408968 ATP8A2Q9NTI2 1148 aa16.06■□□□□ 0.16
IFITM1-202ENST00000408968 SERPINB13Q9UIV8 391 aa16.06■□□□□ 0.16
IFITM1-202ENST00000408968 ZHX2Q9Y6X8 837 aa16.06■□□□□ 0.16
IFITM1-202ENST00000408968 ABHD8Q96I13 439 aa16.05■□□□□ 0.16
IFITM1-202ENST00000408968 MCOLN1Q9GZU1 580 aa16.05■□□□□ 0.16
IFITM1-202ENST00000408968 PALD1Q9ULE6 856 aa16.05■□□□□ 0.16
IFITM1-202ENST00000408968 AFG3L2Q9Y4W6 797 aa16.05■□□□□ 0.16
IFITM1-202ENST00000408968 USP17L5A8MUK1 530 aa16.04■□□□□ 0.16
IFITM1-202ENST00000408968 BTBD19C9JJ37 291 aa16.04■□□□□ 0.16
IFITM1-202ENST00000408968 SP3Q02447 781 aa16.04■□□□□ 0.16
IFITM1-202ENST00000408968 PABPC4Q13310 644 aaKnown RBP eCLIP16.04■□□□□ 0.163e-27■■■■■ 48.5
IFITM1-202ENST00000408968 TICAM2Q86XR7 235 aa16.04■□□□□ 0.16
IFITM1-202ENST00000408968 FAM43AQ8N2R8 423 aa16.04■□□□□ 0.16
IFITM1-202ENST00000408968 PROCA1Q8NCQ7 364 aaPredicted RBP16.04■□□□□ 0.16
IFITM1-202ENST00000408968 EDC3Q96F86 508 aaKnown RBP16.04■□□□□ 0.16
IFITM1-202ENST00000408968 SAP30BPQ9UHR5 308 aaKnown RBP16.04■□□□□ 0.16
IFITM1-202ENST00000408968 PNMA3Q9UL41 463 aa16.04■□□□□ 0.16
IFITM1-202ENST00000408968 TLR2O60603 784 aa16.03■□□□□ 0.16
IFITM1-202ENST00000408968 MBD4O95243 580 aa16.03■□□□□ 0.16
IFITM1-202ENST00000408968 POLR3DP05423 398 aaPredicted RBP16.03■□□□□ 0.16
IFITM1-202ENST00000408968 KIF22Q14807 665 aa16.03■□□□□ 0.16
IFITM1-202ENST00000408968 ANKRD45Q5TZF3 282 aa16.03■□□□□ 0.16
IFITM1-202ENST00000408968 ZNF280CQ8ND82 737 aa16.03■□□□□ 0.16
IFITM1-202ENST00000408968 APPBP2Q92624 585 aa16.03■□□□□ 0.16
IFITM1-202ENST00000408968 SWAP70Q9UH65 585 aa16.03■□□□□ 0.16
IFITM1-202ENST00000408968 MGAMO43451 1857 aa16.03■□□□□ 0.16
IFITM1-202ENST00000408968 FAM196BA6NMK8 535 aa16.02■□□□□ 0.16
IFITM1-202ENST00000408968 PDHXO00330 501 aa16.02■□□□□ 0.16
IFITM1-202ENST00000408968 GNRH1P01148 92 aa16.02■□□□□ 0.16
IFITM1-202ENST00000408968 GNAT2P19087 354 aa16.02■□□□□ 0.16
IFITM1-202ENST00000408968 LCORLQ8N3X6 602 aa16.02■□□□□ 0.16
IFITM1-202ENST00000408968 WDR18Q9BV38 432 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms