RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 MED23Q9ULK4 1368 aa18.62■□□□□ 0.57
LSP1-204ENST00000406638 PTPDC1A2A3K4 754 aa18.62■□□□□ 0.57
LSP1-204ENST00000406638 CTDNEP1O95476 244 aa18.62■□□□□ 0.57
LSP1-204ENST00000406638 ILDR1Q86SU0 546 aaPredicted RBP18.62■□□□□ 0.57
LSP1-204ENST00000406638 SMARCC2Q8TAQ2 1214 aa18.62■□□□□ 0.57
LSP1-204ENST00000406638 CELF1Q92879 486 aaKnown RBP18.62■□□□□ 0.57
LSP1-204ENST00000406638 NCOA5Q9HCD5 579 aaKnown RBP18.62■□□□□ 0.57
LSP1-204ENST00000406638 ANKRD65E5RJM6 399 aa18.61■□□□□ 0.57
LSP1-204ENST00000406638 MAP3K9P80192 1104 aa18.61■□□□□ 0.57
LSP1-204ENST00000406638 CCDC152Q4G0S7 254 aa18.61■□□□□ 0.57
LSP1-204ENST00000406638 NAA16Q6N069 864 aaPredicted RBP18.61■□□□□ 0.57
LSP1-204ENST00000406638 NBPF5PQ86XG9 351 aaPredicted RBP18.61■□□□□ 0.57
LSP1-204ENST00000406638 SETDB2Q96T68 719 aa18.61■□□□□ 0.57
LSP1-204ENST00000406638 AKAP2Q9Y2D5 859 aa18.61■□□□□ 0.57
LSP1-204ENST00000406638 RFC4P35249 363 aa18.61■□□□□ 0.57
LSP1-204ENST00000406638 UBASH3AP57075 661 aa18.61■□□□□ 0.57
LSP1-204ENST00000406638 TSGA10IPQ3SY00 556 aa18.61■□□□□ 0.57
LSP1-204ENST00000406638 LEKR1Q6ZMV7 388 aa18.61■□□□□ 0.57
LSP1-204ENST00000406638 RSRC2Q7L4I2 434 aaKnown RBP18.61■□□□□ 0.57
LSP1-204ENST00000406638 PDE11AQ9HCR9 933 aa18.61■□□□□ 0.57
LSP1-204ENST00000406638 IQSEC3Q9UPP2 1182 aaPredicted RBP18.61■□□□□ 0.57
LSP1-204ENST00000406638 PPP2R2CQ9Y2T4 447 aa18.61■□□□□ 0.57
LSP1-204ENST00000406638 BCORQ6W2J9 1755 aa18.61■□□□□ 0.57
LSP1-204ENST00000406638 SERPINC1P01008 464 aa18.6■□□□□ 0.57
LSP1-204ENST00000406638 SLC3A2P08195 630 aaKnown RBP18.6■□□□□ 0.57
LSP1-204ENST00000406638 CFAP100Q494V2 611 aa18.6■□□□□ 0.57
LSP1-204ENST00000406638 TRAPPC3LQ5T215 181 aa18.6■□□□□ 0.57
LSP1-204ENST00000406638 LOC102724159A0A0B4J2E5 919 aa18.6■□□□□ 0.57
LSP1-204ENST00000406638 APOBRQ0VD83 1088 aa18.6■□□□□ 0.57
LSP1-204ENST00000406638 PWP2Q15269 919 aaKnown RBP18.6■□□□□ 0.57
LSP1-204ENST00000406638 SF3A1Q15459 793 aaKnown RBP18.6■□□□□ 0.57
LSP1-204ENST00000406638 PACS2Q86VP3 889 aa18.6■□□□□ 0.57
LSP1-204ENST00000406638 PSD3Q9NYI0 1048 aa18.6■□□□□ 0.57
LSP1-204ENST00000406638 FBXO3Q9UK99 471 aa18.6■□□□□ 0.57
LSP1-204ENST00000406638 TMEM232C9JQI7 657 aa18.59■□□□□ 0.57
LSP1-204ENST00000406638 KRT32Q14532 448 aa18.59■□□□□ 0.57
LSP1-204ENST00000406638 CCDC102BQ68D86 513 aa18.59■□□□□ 0.57
LSP1-204ENST00000406638 GOLGA6L1Q8N7Z2 621 aa18.59■□□□□ 0.57
LSP1-204ENST00000406638 BPIFA3Q9BQP9 254 aa18.59■□□□□ 0.57
LSP1-204ENST00000406638 MRFAP1Q9Y605 127 aa18.59■□□□□ 0.57
LSP1-204ENST00000406638 ZSCAN12O43309 604 aa18.59■□□□□ 0.57
LSP1-204ENST00000406638 N4BP1O75113 896 aaKnown RBP18.59■□□□□ 0.57
LSP1-204ENST00000406638 CHRNDQ07001 517 aa18.59■□□□□ 0.57
LSP1-204ENST00000406638 NFIXQ14938 502 aa18.59■□□□□ 0.57
LSP1-204ENST00000406638 ADALQ6DHV7 355 aa18.59■□□□□ 0.57
LSP1-204ENST00000406638 HSD3B7Q9H2F3 369 aa18.59■□□□□ 0.57
LSP1-204ENST00000406638 C4BP0C0L5 1744 aa18.59■□□□□ 0.57
LSP1-204ENST00000406638 M0R2C6 588 aa18.58■□□□□ 0.57
LSP1-204ENST00000406638 CYP21A2P08686 494 aa18.58■□□□□ 0.57
LSP1-204ENST00000406638 FGFR2P21802 821 aa18.58■□□□□ 0.57
LSP1-204ENST00000406638 BCAMP50895 628 aa18.58■□□□□ 0.57
LSP1-204ENST00000406638 NLRP12P59046 1061 aa18.58■□□□□ 0.57
LSP1-204ENST00000406638 OTUD7BQ6GQQ9 843 aa18.58■□□□□ 0.57
LSP1-204ENST00000406638 CTR9Q6PD62 1173 aa18.58■□□□□ 0.57
LSP1-204ENST00000406638 RABGGTAQ92696 567 aa18.58■□□□□ 0.57
LSP1-204ENST00000406638 OSBP2Q969R2 916 aa18.58■□□□□ 0.57
LSP1-204ENST00000406638 DHX58Q96C10 678 aa18.58■□□□□ 0.57
LSP1-204ENST00000406638 LY75O60449 1722 aa18.58■□□□□ 0.57
LSP1-204ENST00000406638 TAF1LQ8IZX4 1826 aa18.58■□□□□ 0.57
LSP1-204ENST00000406638 POLR3DP05423 398 aaPredicted RBP18.58■□□□□ 0.56
LSP1-204ENST00000406638 YY1AP1Q9H869 796 aa18.58■□□□□ 0.56
LSP1-204ENST00000406638 PIH1D3Q9NQM4 214 aaKnown RBP18.58■□□□□ 0.56
LSP1-204ENST00000406638 JRKLQ9Y4A0 524 aa18.58■□□□□ 0.56
LSP1-204ENST00000406638 CLIC4Q9Y696 253 aa18.58■□□□□ 0.56
LSP1-204ENST00000406638 SPEF2Q9C093 1822 aa18.58■□□□□ 0.56
LSP1-204ENST00000406638 ZNF831Q5JPB2 1677 aa18.57■□□□□ 0.56
LSP1-204ENST00000406638 NEDD4P46934 1319 aa18.57■□□□□ 0.56
LSP1-204ENST00000406638 PFKFB2O60825 505 aa18.57■□□□□ 0.56
LSP1-204ENST00000406638 DHX8Q14562 1220 aaKnown RBP18.57■□□□□ 0.56
LSP1-204ENST00000406638 HSP90AA4PQ58FG1 418 aa18.57■□□□□ 0.56
LSP1-204ENST00000406638 IGHMBP2P38935 993 aaKnown RBP18.57■□□□□ 0.56
LSP1-204ENST00000406638 STK38Q15208 465 aa18.57■□□□□ 0.56
LSP1-204ENST00000406638 TTC31Q49AM3 519 aaPredicted RBP18.57■□□□□ 0.56
LSP1-204ENST00000406638 IQUBQ8NA54 791 aa18.57■□□□□ 0.56
LSP1-204ENST00000406638 DRC1Q96MC2 740 aa18.57■□□□□ 0.56
LSP1-204ENST00000406638 MAST3O60307 1309 aa18.56■□□□□ 0.56
LSP1-204ENST00000406638 ZNF202O95125 648 aa18.56■□□□□ 0.56
LSP1-204ENST00000406638 TOP1P11387 765 aaKnown RBP18.56■□□□□ 0.56
LSP1-204ENST00000406638 KLRK1P26718 216 aa18.56■□□□□ 0.56
LSP1-204ENST00000406638 TXLNAP40222 546 aa18.56■□□□□ 0.56
LSP1-204ENST00000406638 PUM3Q15397 648 aaKnown RBP18.56■□□□□ 0.56
LSP1-204ENST00000406638 TXNRD1Q16881 649 aa18.56■□□□□ 0.56
LSP1-204ENST00000406638 MCMDC2Q4G0Z9 681 aa18.56■□□□□ 0.56
LSP1-204ENST00000406638 NOM1Q5C9Z4 860 aaKnown RBP18.56■□□□□ 0.56
LSP1-204ENST00000406638 WWC2Q6AWC2 1192 aa18.56■□□□□ 0.56
LSP1-204ENST00000406638 PDILTQ8N807 584 aa18.56■□□□□ 0.56
LSP1-204ENST00000406638 GOLGA1Q92805 767 aa18.56■□□□□ 0.56
LSP1-204ENST00000406638 LLPHQ9BRT6 129 aaKnown RBP18.56■□□□□ 0.56
LSP1-204ENST00000406638 SUGCTQ9HAC7 445 aa18.56■□□□□ 0.56
LSP1-204ENST00000406638 GEMIN8Q9NWZ8 242 aaKnown RBP18.56■□□□□ 0.56
LSP1-204ENST00000406638 MAP2K7O14733 419 aa18.56■□□□□ 0.56
LSP1-204ENST00000406638 IRX2Q9BZI1 471 aaPredicted RBP18.56■□□□□ 0.56
LSP1-204ENST00000406638 SCN7AQ01118 1682 aa18.56■□□□□ 0.56
LSP1-204ENST00000406638 EIF3CLB5ME19 914 aaKnown RBP18.55■□□□□ 0.56
LSP1-204ENST00000406638 KARSQ15046 597 aaKnown RBP18.55■□□□□ 0.56
LSP1-204ENST00000406638 TOGARAM2Q6ZUX3 1019 aa18.55■□□□□ 0.56
LSP1-204ENST00000406638 STOX1Q6ZVD7 989 aa18.55■□□□□ 0.56
LSP1-204ENST00000406638 EIF3CQ99613 913 aaKnown RBP18.55■□□□□ 0.56
LSP1-204ENST00000406638 RGS17Q9UGC6 210 aaPredicted RBP18.55■□□□□ 0.56
LSP1-204ENST00000406638 LRP5O75197 1615 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms