RNA–Protein interactions for RNA: ENST00000405053.7

PDE4D-206, Transcript of phosphodiesterase 4D, humanhuman

TSL 5

Gene PDE4D, Length 512 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-206ENST00000405053 ZKSCAN1P17029 563 aaPredicted RBP12.84□□□□□ -0.35
PDE4D-206ENST00000405053 NT5C2P49902 561 aa12.84□□□□□ -0.35
PDE4D-206ENST00000405053 HAND2P61296 217 aa12.84□□□□□ -0.35
PDE4D-206ENST00000405053 EVX2Q03828 476 aa12.84□□□□□ -0.35
PDE4D-206ENST00000405053 C16orf86Q6ZW13 317 aa12.84□□□□□ -0.35
PDE4D-206ENST00000405053 TBC1D10CQ8IV04 446 aa12.84□□□□□ -0.35
PDE4D-206ENST00000405053 ZSCAN29Q8IWY8 852 aaPredicted RBP12.84□□□□□ -0.35
PDE4D-206ENST00000405053 CDAN1Q8IWY9 1227 aa12.84□□□□□ -0.35
PDE4D-206ENST00000405053 RASEFQ8IZ41 740 aa12.84□□□□□ -0.35
PDE4D-206ENST00000405053 STAG1Q8WVM7 1258 aa12.84□□□□□ -0.35
PDE4D-206ENST00000405053 TBC1D32Q96NH3 1257 aa12.84□□□□□ -0.35
PDE4D-206ENST00000405053 C22orf23Q9BZE7 217 aa12.84□□□□□ -0.35
PDE4D-206ENST00000405053 HERC5Q9UII4 1024 aaKnown RBP12.84□□□□□ -0.35
PDE4D-206ENST00000405053 SERPINB13Q9UIV8 391 aa12.84□□□□□ -0.35
PDE4D-206ENST00000405053 SCAF8Q9UPN6 1271 aaKnown RBP12.84□□□□□ -0.35
PDE4D-206ENST00000405053 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.84□□□□□ -0.35
PDE4D-206ENST00000405053 TAF6LQ9Y6J9 622 aa12.84□□□□□ -0.35
PDE4D-206ENST00000405053 KIF3CO14782 793 aa12.83□□□□□ -0.36
PDE4D-206ENST00000405053 ORC4O43929 436 aa12.83□□□□□ -0.36
PDE4D-206ENST00000405053 SLC3A2P08195 630 aaKnown RBP12.83□□□□□ -0.36
PDE4D-206ENST00000405053 YY1P25490 414 aa12.83□□□□□ -0.36
PDE4D-206ENST00000405053 CTDSPL2Q05D32 466 aa12.83□□□□□ -0.36
PDE4D-206ENST00000405053 KRT32Q14532 448 aa12.83□□□□□ -0.36
PDE4D-206ENST00000405053 AKNAD1Q5T1N1 836 aa12.83□□□□□ -0.36
PDE4D-206ENST00000405053 HOOK2Q96ED9 719 aa12.83□□□□□ -0.36
PDE4D-206ENST00000405053 RNF41Q9H4P4 317 aaPredicted RBP12.83□□□□□ -0.36
PDE4D-206ENST00000405053 DNAJC18Q9H819 358 aa12.83□□□□□ -0.36
PDE4D-206ENST00000405053 SWAP70Q9UH65 585 aa12.83□□□□□ -0.36
PDE4D-206ENST00000405053 CLEC11AQ9Y240 323 aa12.83□□□□□ -0.36
PDE4D-206ENST00000405053 SNX14Q9Y5W7 946 aa12.83□□□□□ -0.36
PDE4D-206ENST00000405053 TACC3Q9Y6A5 838 aa12.83□□□□□ -0.36
PDE4D-206ENST00000405053 ADM5C9JUS6 153 aa12.82□□□□□ -0.36
PDE4D-206ENST00000405053 E7EWF7 191 aa12.82□□□□□ -0.36
PDE4D-206ENST00000405053 CDK8P49336 464 aa12.82□□□□□ -0.36
PDE4D-206ENST00000405053 PDE4BQ07343 736 aa12.82□□□□□ -0.36
PDE4D-206ENST00000405053 SLC4A8Q2Y0W8 1093 aa12.82□□□□□ -0.36
PDE4D-206ENST00000405053 SUPT20HL1Q3ZLR7 823 aa12.82□□□□□ -0.36
PDE4D-206ENST00000405053 NBPF12Q5TAG4 269 aaPredicted RBP12.82□□□□□ -0.36
PDE4D-206ENST00000405053 MAP1SQ66K74 1059 aaPredicted RBP12.82□□□□□ -0.36
PDE4D-206ENST00000405053 CHADLQ6NUI6 762 aa12.82□□□□□ -0.36
PDE4D-206ENST00000405053 TATDN1Q6P1N9 297 aa12.82□□□□□ -0.36
PDE4D-206ENST00000405053 STOX1Q6ZVD7 989 aa12.82□□□□□ -0.36
PDE4D-206ENST00000405053 USP48Q86UV5 1035 aa12.82□□□□□ -0.36
PDE4D-206ENST00000405053 DYNLL2Q96FJ2 89 aa12.82□□□□□ -0.36
PDE4D-206ENST00000405053 GLIS2Q9BZE0 524 aaPredicted RBP12.82□□□□□ -0.36
PDE4D-206ENST00000405053 CNNM2Q9H8M5 875 aa12.82□□□□□ -0.36
PDE4D-206ENST00000405053 ZNF287Q9HBT7 754 aa12.82□□□□□ -0.36
PDE4D-206ENST00000405053 SSC5DA1L4H1 1573 aa12.81□□□□□ -0.36
PDE4D-206ENST00000405053 SHMT1P34896 483 aa12.81□□□□□ -0.36
PDE4D-206ENST00000405053 MFSD6Q6ZSS7 791 aa12.81□□□□□ -0.36
PDE4D-206ENST00000405053 ZNF784Q8NCA9 323 aaPredicted RBP12.81□□□□□ -0.36
PDE4D-206ENST00000405053 CDCA5Q96FF9 252 aa12.81□□□□□ -0.36
PDE4D-206ENST00000405053 TM6SF1Q9BZW5 370 aa12.81□□□□□ -0.36
PDE4D-206ENST00000405053 NEDD4P46934 1319 aa12.81□□□□□ -0.36
PDE4D-206ENST00000405053 ITGBL1O95965 494 aaPredicted RBP12.8□□□□□ -0.36
PDE4D-206ENST00000405053 RASA1P20936 1047 aa12.8□□□□□ -0.36
PDE4D-206ENST00000405053 ADCK5Q3MIX3 580 aa12.8□□□□□ -0.36
PDE4D-206ENST00000405053 PRAMEF18Q5VWM3 479 aa12.8□□□□□ -0.36
PDE4D-206ENST00000405053 DCAF15Q66K64 600 aa12.8□□□□□ -0.36
PDE4D-206ENST00000405053 CRACR2BQ8N4Y2 399 aaPredicted RBP12.8□□□□□ -0.36
PDE4D-206ENST00000405053 SLC44A5Q8NCS7 719 aa12.8□□□□□ -0.36
PDE4D-206ENST00000405053 KIF2CQ99661 725 aa12.8□□□□□ -0.36
PDE4D-206ENST00000405053 KRT23Q9C075 422 aa12.8□□□□□ -0.36
PDE4D-206ENST00000405053 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.8□□□□□ -0.36
PDE4D-206ENST00000405053 ZNF112Q9UJU3 913 aa12.8□□□□□ -0.36
PDE4D-206ENST00000405053 PHF20L1A8MW92 1017 aa12.79□□□□□ -0.36
PDE4D-206ENST00000405053 HMGB1P09429 215 aaKnown RBP12.79□□□□□ -0.36
PDE4D-206ENST00000405053 SLURP2P0DP57 97 aa12.79□□□□□ -0.36
PDE4D-206ENST00000405053 PSMA5P28066 241 aa12.79□□□□□ -0.36
PDE4D-206ENST00000405053 TRDNQ13061 729 aa12.79□□□□□ -0.36
PDE4D-206ENST00000405053 DLK2Q6UY11 383 aa12.79□□□□□ -0.36
PDE4D-206ENST00000405053 MB21D2Q8IYB1 491 aaPredicted RBP12.79□□□□□ -0.36
PDE4D-206ENST00000405053 NCOA7Q8NI08 942 aa12.79□□□□□ -0.36
PDE4D-206ENST00000405053 RBM46Q8TBY0 533 aaKnown RBP12.79□□□□□ -0.36
PDE4D-206ENST00000405053 CCDC17Q96LX7 622 aa12.79□□□□□ -0.36
PDE4D-206ENST00000405053 NEK1Q96PY6 1258 aa12.79□□□□□ -0.36
PDE4D-206ENST00000405053 TRIM34Q9BYJ4 488 aa12.79□□□□□ -0.36
PDE4D-206ENST00000405053 MKNK2Q9HBH9 465 aa12.79□□□□□ -0.36
PDE4D-206ENST00000405053 INCENPQ9NQS7 918 aa12.79□□□□□ -0.36
PDE4D-206ENST00000405053 FAM196BA6NMK8 535 aa12.78□□□□□ -0.36
PDE4D-206ENST00000405053 PRDM1O75626 825 aa12.78□□□□□ -0.36
PDE4D-206ENST00000405053 TOMM70O94826 608 aa12.78□□□□□ -0.36
PDE4D-206ENST00000405053 NF2P35240 595 aa12.78□□□□□ -0.36
PDE4D-206ENST00000405053 MAP3K11Q16584 847 aa12.78□□□□□ -0.36
PDE4D-206ENST00000405053 MIGA2Q7L4E1 593 aa12.78□□□□□ -0.36
PDE4D-206ENST00000405053 IL27Q8NEV9 243 aa12.78□□□□□ -0.36
PDE4D-206ENST00000405053 NKX2-3Q8TAU0 364 aa12.78□□□□□ -0.36
PDE4D-206ENST00000405053 ESR2Q92731 530 aa12.78□□□□□ -0.36
PDE4D-206ENST00000405053 JAKMIP1Q96N16 626 aaKnown RBP12.78□□□□□ -0.36
PDE4D-206ENST00000405053 ZNF341Q9BYN7 854 aa12.78□□□□□ -0.36
PDE4D-206ENST00000405053 ZSWIM6Q9HCJ5 1215 aa12.78□□□□□ -0.36
PDE4D-206ENST00000405053 WDR19Q8NEZ3 1342 aa12.78□□□□□ -0.36
PDE4D-206ENST00000405053 PLIN4Q96Q06 1357 aa12.78□□□□□ -0.36
PDE4D-206ENST00000405053 B4E1Z4 1266 aa12.77□□□□□ -0.37
PDE4D-206ENST00000405053 TRAF5O00463 557 aa12.77□□□□□ -0.37
PDE4D-206ENST00000405053 KDM4AO75164 1064 aa12.77□□□□□ -0.37
PDE4D-206ENST00000405053 USP2O75604 605 aaPredicted RBP12.77□□□□□ -0.37
PDE4D-206ENST00000405053 EXOSC10Q01780 885 aaKnown RBP12.77□□□□□ -0.37
PDE4D-206ENST00000405053 COL9A3Q14050 684 aaPredicted RBP12.77□□□□□ -0.37
PDE4D-206ENST00000405053 RRP1BQ14684 758 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms