RNA–Protein interactions for RNA: ENST00000403562.5

PRKAR1B-203, Transcript of protein kinase cAMP-dependent type I regulatory subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1B, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1B-203ENST00000403562 CDC27P30260 824 aa28.47■■■□□ 2.15
PRKAR1B-203ENST00000403562 SYNE3Q6ZMZ3 975 aa28.47■■■□□ 2.15
PRKAR1B-203ENST00000403562 FBXO33Q7Z6M2 555 aa28.47■■■□□ 2.15
PRKAR1B-203ENST00000403562 ADGRA1Q86SQ6 560 aa28.47■■■□□ 2.15
PRKAR1B-203ENST00000403562 KCNG4Q8TDN1 519 aa28.47■■■□□ 2.15
PRKAR1B-203ENST00000403562 INCENPQ9NQS7 918 aa28.47■■■□□ 2.15
PRKAR1B-203ENST00000403562 ANAPC4Q9UJX5 808 aa28.47■■■□□ 2.15
PRKAR1B-203ENST00000403562 DUOX1Q9NRD9 1551 aa28.47■■■□□ 2.15
PRKAR1B-203ENST00000403562 LRRC37AA6NMS7 1700 aa28.47■■■□□ 2.15
PRKAR1B-203ENST00000403562 FAM160A1Q05DH4 1040 aa28.47■■■□□ 2.15
PRKAR1B-203ENST00000403562 NTRK3Q16288 839 aa28.47■■■□□ 2.15
PRKAR1B-203ENST00000403562 FHDC1Q9C0D6 1143 aaPredicted RBP28.47■■■□□ 2.15
PRKAR1B-203ENST00000403562 A0A1W2PQ27 194 aa28.46■■■□□ 2.15
PRKAR1B-203ENST00000403562 A0A1W2PQ64 194 aa28.46■■■□□ 2.15
PRKAR1B-203ENST00000403562 A0A1W2PQD8 194 aa28.46■■■□□ 2.15
PRKAR1B-203ENST00000403562 WTIPA6NIX2 430 aaPredicted RBP28.46■■■□□ 2.15
PRKAR1B-203ENST00000403562 IARSP41252 1262 aaKnown RBP28.46■■■□□ 2.15
PRKAR1B-203ENST00000403562 PPARAQ07869 468 aa28.46■■■□□ 2.15
PRKAR1B-203ENST00000403562 LINC00301Q8NCQ3 95 aa28.46■■■□□ 2.15
PRKAR1B-203ENST00000403562 ATP6V0A2Q9Y487 856 aa28.46■■■□□ 2.15
PRKAR1B-203ENST00000403562 RXRAP19793 462 aa28.45■■■□□ 2.15
PRKAR1B-203ENST00000403562 STK38Q15208 465 aa28.45■■■□□ 2.15
PRKAR1B-203ENST00000403562 ANO6Q4KMQ2 910 aa28.45■■■□□ 2.15
PRKAR1B-203ENST00000403562 ADALQ6DHV7 355 aa28.45■■■□□ 2.15
PRKAR1B-203ENST00000403562 TMTC2Q8N394 836 aa28.45■■■□□ 2.15
PRKAR1B-203ENST00000403562 RIOK1Q9BRS2 568 aaKnown RBP28.45■■■□□ 2.15
PRKAR1B-203ENST00000403562 GOLPH3LQ9H4A5 285 aa28.45■■■□□ 2.15
PRKAR1B-203ENST00000403562 ERICH2A1L162 156 aa28.45■■■□□ 2.14
PRKAR1B-203ENST00000403562 KINO60870 393 aaKnown RBP28.45■■■□□ 2.14
PRKAR1B-203ENST00000403562 RCAN1P53805 252 aa28.45■■■□□ 2.14
PRKAR1B-203ENST00000403562 TMC4Q7Z404 712 aa28.45■■■□□ 2.14
PRKAR1B-203ENST00000403562 SP8Q8IXZ3 490 aa28.45■■■□□ 2.14
PRKAR1B-203ENST00000403562 TTLL6Q8N841 843 aa28.45■■■□□ 2.14
PRKAR1B-203ENST00000403562 ENGASEQ8NFI3 743 aa28.45■■■□□ 2.14
PRKAR1B-203ENST00000403562 POLR3DP05423 398 aaPredicted RBP28.44■■■□□ 2.14
PRKAR1B-203ENST00000403562 SNW1Q13573 536 aaKnown RBP28.44■■■□□ 2.14
PRKAR1B-203ENST00000403562 WTAPQ15007 396 aa28.44■■■□□ 2.14
PRKAR1B-203ENST00000403562 FSIP1Q8NA03 581 aa28.44■■■□□ 2.14
PRKAR1B-203ENST00000403562 MRPS27Q92552 414 aaKnown RBP28.44■■■□□ 2.14
PRKAR1B-203ENST00000403562 TOMM22Q9NS69 142 aa28.44■■■□□ 2.14
PRKAR1B-203ENST00000403562 FAM217BQ9NTX9 383 aaPredicted RBP28.44■■■□□ 2.14
PRKAR1B-203ENST00000403562 PCDHA7Q9UN72 937 aa28.44■■■□□ 2.14
PRKAR1B-203ENST00000403562 BRCA1P38398 1863 aaKnown RBP28.44■■■□□ 2.14
PRKAR1B-203ENST00000403562 ZBTB22O15209 634 aa28.43■■■□□ 2.14
PRKAR1B-203ENST00000403562 RRP12Q5JTH9 1297 aaKnown RBP28.43■■■□□ 2.14
PRKAR1B-203ENST00000403562 C7orf43Q8WVR3 580 aa28.43■■■□□ 2.14
PRKAR1B-203ENST00000403562 PIM2Q9P1W9 311 aa28.43■■■□□ 2.14
PRKAR1B-203ENST00000403562 KIF28PB7ZC32 967 aa28.43■■■□□ 2.14
PRKAR1B-203ENST00000403562 GPSM2P81274 684 aa28.43■■■□□ 2.14
PRKAR1B-203ENST00000403562 TMED8Q6PL24 325 aaPredicted RBP28.43■■■□□ 2.14
PRKAR1B-203ENST00000403562 GJB4Q9NTQ9 266 aa28.43■■■□□ 2.14
PRKAR1B-203ENST00000403562 TRIM29Q14134 588 aa28.42■■■□□ 2.14
PRKAR1B-203ENST00000403562 SF3A1Q15459 793 aaKnown RBP28.42■■■□□ 2.14
PRKAR1B-203ENST00000403562 KRT40Q6A162 431 aa28.42■■■□□ 2.14
PRKAR1B-203ENST00000403562 SDR42E1Q8WUS8 393 aa28.42■■■□□ 2.14
PRKAR1B-203ENST00000403562 WASF1Q92558 559 aa28.42■■■□□ 2.14
PRKAR1B-203ENST00000403562 PHKBQ93100 1093 aa28.42■■■□□ 2.14
PRKAR1B-203ENST00000403562 ZNF219Q9P2Y4 722 aaPredicted RBP28.42■■■□□ 2.14
PRKAR1B-203ENST00000403562 CLIC4Q9Y696 253 aa28.42■■■□□ 2.14
PRKAR1B-203ENST00000403562 IFNAR1P17181 557 aa28.41■■■□□ 2.14
PRKAR1B-203ENST00000403562 SSRP1Q08945 709 aaKnown RBP28.41■■■□□ 2.14
PRKAR1B-203ENST00000403562 CCDC144CPQ8IYA2 1237 aa28.41■■■□□ 2.14
PRKAR1B-203ENST00000403562 CBX8Q9HC52 389 aa28.41■■■□□ 2.14
PRKAR1B-203ENST00000403562 SPTLC2O15270 562 aa28.41■■■□□ 2.14
PRKAR1B-203ENST00000403562 RANBP6O60518 1105 aaKnown RBP28.41■■■□□ 2.14
PRKAR1B-203ENST00000403562 FMNL1O95466 1100 aaPredicted RBP28.41■■■□□ 2.14
PRKAR1B-203ENST00000403562 HIBADHP31937 336 aaKnown RBP28.41■■■□□ 2.14
PRKAR1B-203ENST00000403562 MYL10Q9BUA6 226 aa28.41■■■□□ 2.14
PRKAR1B-203ENST00000403562 ANKIB1Q9P2G1 1089 aa28.41■■■□□ 2.14
PRKAR1B-203ENST00000403562 ANO1Q5XXA6 986 aa28.4■■■□□ 2.14
PRKAR1B-203ENST00000403562 ESR2Q92731 530 aa28.4■■■□□ 2.14
PRKAR1B-203ENST00000403562 XDHP47989 1333 aa28.4■■■□□ 2.14
PRKAR1B-203ENST00000403562 LTBP1Q14766 1721 aa28.4■■■□□ 2.14
PRKAR1B-203ENST00000403562 PCP11498 1178 aaKnown RBP28.39■■■□□ 2.14
PRKAR1B-203ENST00000403562 AIFM3Q96NN9 605 aa28.39■■■□□ 2.14
PRKAR1B-203ENST00000403562 UBAC1Q9BSL1 405 aa28.39■■■□□ 2.14
PRKAR1B-203ENST00000403562 CCDC196A0A1B0GTZ2 297 aa28.39■■■□□ 2.13
PRKAR1B-203ENST00000403562 MINDY4BA8MYZ0 360 aa28.39■■■□□ 2.13
PRKAR1B-203ENST00000403562 PLCB2Q00722 1185 aa28.39■■■□□ 2.13
PRKAR1B-203ENST00000403562 RTN1Q16799 776 aa28.39■■■□□ 2.13
PRKAR1B-203ENST00000403562 TDRD7Q8NHU6 1098 aaKnown RBP28.39■■■□□ 2.13
PRKAR1B-203ENST00000403562 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.39■■■□□ 2.13
PRKAR1B-203ENST00000403562 C21orf2O43822 256 aa28.38■■■□□ 2.13
PRKAR1B-203ENST00000403562 KLRK1P26718 216 aa28.38■■■□□ 2.13
PRKAR1B-203ENST00000403562 LUZP1Q86V48 1076 aa28.38■■■□□ 2.13
PRKAR1B-203ENST00000403562 FMR1NBQ8N0W7 255 aaPredicted RBP28.38■■■□□ 2.13
PRKAR1B-203ENST00000403562 NSUN4Q96CB9 384 aaKnown RBP28.38■■■□□ 2.13
PRKAR1B-203ENST00000403562 SYT17Q9BSW7 474 aa28.38■■■□□ 2.13
PRKAR1B-203ENST00000403562 PODXL2Q9NZ53 605 aa28.38■■■□□ 2.13
PRKAR1B-203ENST00000403562 AP5Z1O43299 807 aa28.37■■■□□ 2.13
PRKAR1B-203ENST00000403562 ZNF165P49910 485 aa28.37■■■□□ 2.13
PRKAR1B-203ENST00000403562 GNL2Q13823 731 aaKnown RBP28.37■■■□□ 2.13
PRKAR1B-203ENST00000403562 STX1AQ16623 288 aa28.37■■■□□ 2.13
PRKAR1B-203ENST00000403562 DALRD3Q5D0E6 543 aaKnown RBP28.37■■■□□ 2.13
PRKAR1B-203ENST00000403562 TRIM22Q8IYM9 498 aa28.37■■■□□ 2.13
PRKAR1B-203ENST00000403562 SNED1Q8TER0 1413 aa28.37■■■□□ 2.13
PRKAR1B-203ENST00000403562 ZNF384Q8TF68 577 aa28.37■■■□□ 2.13
PRKAR1B-203ENST00000403562 SLC26A6Q9BXS9 759 aa28.37■■■□□ 2.13
PRKAR1B-203ENST00000403562 U2AF2P26368 475 aaKnown RBP eCLIP28.37■■■□□ 2.134e-6■□□□□ 10.9
PRKAR1B-203ENST00000403562 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms