RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 TAF1DQ9H5J8 278 aaPredicted RBP7.21□□□□□ -1.26
CLIP4-202ENST00000401605 RNF19AQ9NV58 838 aa7.21□□□□□ -1.26
CLIP4-202ENST00000401605 DBF4Q9UBU7 674 aaPredicted RBP7.21□□□□□ -1.26
CLIP4-202ENST00000401605 DLEC1Q9Y238 1755 aa7.2□□□□□ -1.26
CLIP4-202ENST00000401605 IL16Q14005 1332 aa7.2□□□□□ -1.26
CLIP4-202ENST00000401605 ZNF541Q9H0D2 1346 aa7.2□□□□□ -1.26
CLIP4-202ENST00000401605 IPO5O00410 1097 aaKnown RBP7.2□□□□□ -1.26
CLIP4-202ENST00000401605 TNNT1P13805 278 aa7.2□□□□□ -1.26
CLIP4-202ENST00000401605 FLT3P36888 993 aa7.2□□□□□ -1.26
CLIP4-202ENST00000401605 ZSCAN26Q16670 478 aa7.2□□□□□ -1.26
CLIP4-202ENST00000401605 DNAJC21Q5F1R6 531 aaKnown RBP7.2□□□□□ -1.26
CLIP4-202ENST00000401605 JAKMIP3Q5VZ66 844 aa7.2□□□□□ -1.26
CLIP4-202ENST00000401605 PPP1R18Q6NYC8 613 aa7.2□□□□□ -1.26
CLIP4-202ENST00000401605 C3orf67Q6ZVT6 689 aa7.2□□□□□ -1.26
CLIP4-202ENST00000401605 SMC5Q8IY18 1101 aa7.2□□□□□ -1.26
CLIP4-202ENST00000401605 GPC2Q8N158 579 aa7.2□□□□□ -1.26
CLIP4-202ENST00000401605 TSC1Q92574 1164 aa7.2□□□□□ -1.26
CLIP4-202ENST00000401605 C22orf23Q9BZE7 217 aa7.2□□□□□ -1.26
CLIP4-202ENST00000401605 SUN2Q9UH99 717 aa7.2□□□□□ -1.26
CLIP4-202ENST00000401605 RSPH14Q9UHP6 348 aa7.2□□□□□ -1.26
CLIP4-202ENST00000401605 TRMT112Q9UI30 125 aaKnown RBP7.2□□□□□ -1.26
CLIP4-202ENST00000401605 HACL1Q9UJ83 578 aa7.2□□□□□ -1.26
CLIP4-202ENST00000401605 TPX2Q9ULW0 747 aaKnown RBP7.2□□□□□ -1.26
CLIP4-202ENST00000401605 SNED1Q8TER0 1413 aa7.2□□□□□ -1.26
CLIP4-202ENST00000401605 SH3TC1Q8TE82 1336 aa7.2□□□□□ -1.26
CLIP4-202ENST00000401605 ANKRD31Q8N7Z5 1873 aa7.2□□□□□ -1.26
CLIP4-202ENST00000401605 USP17L5A8MUK1 530 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 GOLGA6L6A8MZA4 724 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 GOLGA6L22H0YM25 854 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 PITPNM1O00562 1244 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 APAF1O14727 1248 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 BBOX1O75936 387 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 POTEIP0CG38 1075 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 POTEJP0CG39 1038 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 MAGEA8P43361 318 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 EIF6P56537 245 aaKnown RBP7.19□□□□□ -1.26
CLIP4-202ENST00000401605 MTMR3Q13615 1198 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 SLFNL1Q499Z3 407 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 DUSP27Q5VZP5 1158 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 ANKRD13DQ6ZTN6 518 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 PNMA8AQ86V59 439 aaPredicted RBP7.19□□□□□ -1.26
CLIP4-202ENST00000401605 GOLGA6L1Q8N7Z2 621 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 TMEM87AQ8NBN3 555 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 PLBD2Q8NHP8 589 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 MBIPQ9NS73 344 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 HYPKQ9NX55 129 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 G3BP2Q9UN86 482 aaKnown RBP7.19□□□□□ -1.26
CLIP4-202ENST00000401605 ATP6V0A2Q9Y487 856 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 COL11A2P13942 1736 aaPredicted RBP7.19□□□□□ -1.26
CLIP4-202ENST00000401605 TNRC6CQ9HCJ0 1690 aaKnown RBP7.19□□□□□ -1.26
CLIP4-202ENST00000401605 VIRMAQ69YN4 1812 aaKnown RBP7.19□□□□□ -1.26
CLIP4-202ENST00000401605 P4HBP07237 508 aaKnown RBP7.19□□□□□ -1.26
CLIP4-202ENST00000401605 SKILP12757 684 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 EPHX2P34913 555 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 BMS1Q14692 1282 aaKnown RBP7.19□□□□□ -1.26
CLIP4-202ENST00000401605 GLYCTKQ8IVS8 523 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 FAM200AQ8TCP9 573 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 ZNF396Q96N95 335 aaPredicted RBP7.19□□□□□ -1.26
CLIP4-202ENST00000401605 VPS33BQ9H267 617 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 RASSF4Q9H2L5 321 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 UPF2Q9HAU5 1272 aaKnown RBP7.19□□□□□ -1.26
CLIP4-202ENST00000401605 IFT57Q9NWB7 429 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 KDM3BQ7LBC6 1761 aa7.19□□□□□ -1.26
CLIP4-202ENST00000401605 HCLS1P14317 486 aaPredicted RBP7.18□□□□□ -1.26
CLIP4-202ENST00000401605 IBSPP21815 317 aaPredicted RBP7.18□□□□□ -1.26
CLIP4-202ENST00000401605 MSNP26038 577 aaKnown RBP7.18□□□□□ -1.26
CLIP4-202ENST00000401605 GNAI1P63096 354 aa7.18□□□□□ -1.26
CLIP4-202ENST00000401605 FANCCQ00597 558 aa7.18□□□□□ -1.26
CLIP4-202ENST00000401605 ZSCAN30Q86W11 494 aa7.18□□□□□ -1.26
CLIP4-202ENST00000401605 NIM1KQ8IY84 436 aa7.18□□□□□ -1.26
CLIP4-202ENST00000401605 RPUSD2Q8IZ73 545 aaKnown RBP7.18□□□□□ -1.26
CLIP4-202ENST00000401605 SUPT20HQ8NEM7 779 aa7.18□□□□□ -1.26
CLIP4-202ENST00000401605 FAM174AQ8TBP5 190 aa7.18□□□□□ -1.26
CLIP4-202ENST00000401605 RMI1Q9H9A7 625 aa7.18□□□□□ -1.26
CLIP4-202ENST00000401605 MKRN1Q9UHC7 482 aaKnown RBP7.18□□□□□ -1.26
CLIP4-202ENST00000401605 DCTN4Q9UJW0 460 aa7.18□□□□□ -1.26
CLIP4-202ENST00000401605 R3HCC1Q9Y3T6 440 aaKnown RBP7.18□□□□□ -1.26
CLIP4-202ENST00000401605 COL4A3BPQ9Y5P4 624 aa7.18□□□□□ -1.26
CLIP4-202ENST00000401605 ABCC4O15439 1325 aa7.18□□□□□ -1.26
CLIP4-202ENST00000401605 LAMB4A4D0S4 1761 aa7.18□□□□□ -1.26
CLIP4-202ENST00000401605 PPIP5K2O43314 1243 aa7.18□□□□□ -1.26
CLIP4-202ENST00000401605 PPFIA2O75334 1257 aa7.18□□□□□ -1.26
CLIP4-202ENST00000401605 PPP2R5AQ15172 486 aa7.18□□□□□ -1.26
CLIP4-202ENST00000401605 ZNF746Q6NUN9 644 aaPredicted RBP7.18□□□□□ -1.26
CLIP4-202ENST00000401605 SASS6Q6UVJ0 657 aa7.18□□□□□ -1.26
CLIP4-202ENST00000401605 WDR90Q96KV7 1748 aa7.18□□□□□ -1.26
CLIP4-202ENST00000401605 FEZ1Q99689 392 aa7.18□□□□□ -1.26
CLIP4-202ENST00000401605 CCSER2Q9H7U1 834 aa7.18□□□□□ -1.26
CLIP4-202ENST00000401605 COMMD10Q9Y6G5 202 aa7.18□□□□□ -1.26
CLIP4-202ENST00000401605 SLX4Q8IY92 1834 aa7.18□□□□□ -1.26
CLIP4-202ENST00000401605 ICMTO60725 284 aa7.17□□□□□ -1.26
CLIP4-202ENST00000401605 FRAT2O75474 233 aaPredicted RBP7.17□□□□□ -1.26
CLIP4-202ENST00000401605 SKIP12755 728 aa7.17□□□□□ -1.26
CLIP4-202ENST00000401605 RASA1P20936 1047 aa7.17□□□□□ -1.26
CLIP4-202ENST00000401605 GJA5P36382 358 aa7.17□□□□□ -1.26
CLIP4-202ENST00000401605 IFT88Q13099 833 aa7.17□□□□□ -1.26
CLIP4-202ENST00000401605 TRIM28Q13263 835 aaKnown RBP7.17□□□□□ -1.26
CLIP4-202ENST00000401605 GRAPQ13588 217 aa7.17□□□□□ -1.26
CLIP4-202ENST00000401605 GJC2Q5T442 439 aaPredicted RBP7.17□□□□□ -1.26
CLIP4-202ENST00000401605 PRPF38BQ5VTL8 546 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms