RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 IGHDP01880 384 aa12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 ZSCAN20P17040 1043 aaPredicted RBP12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 SLC1A4P43007 532 aa12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 RAPGEF1Q13905 1077 aa12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 KCTD2Q14681 263 aa12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 GNPTABQ3T906 1256 aa12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 TTC31Q49AM3 519 aaPredicted RBP12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 CCDC183Q5T5S1 534 aa12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 ANLNQ9NQW6 1124 aa12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 ATP2A2P16615 1042 aaKnown RBP12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 UHRF1BP1LA0JNW5 1464 aa12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 DPYSL4O14531 572 aa12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 PRPHP41219 470 aa12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 FBXW4P57775 412 aa12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 CAPN9O14815 690 aa12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 SCNN1DP51172 638 aa12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 PARP10Q53GL7 1025 aa12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 LIMCH1Q9UPQ0 1083 aa12.24□□□□□ -0.45
CACNA1C-216ENST00000399638 TUBB4AP04350 444 aa12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 ATP6V1E1P36543 226 aa12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 SELENOOQ9BVL4 669 aa12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 MBIPQ9NS73 344 aa12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 PTPN14Q15678 1187 aa12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 CCDC77Q9BR77 488 aa12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 PSMD2Q13200 908 aa12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 LETM2Q2VYF4 491 aa12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 CCDC157Q569K6 752 aa12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 SND1Q7KZF4 910 aaKnown RBP eCLIP12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 MMS19Q96T76 1030 aa12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 SLAIN2Q9P270 581 aa12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 PSDA5PKW4 1024 aaPredicted RBP12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 N4BP3O15049 544 aa12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 CKAP4Q07065 602 aaKnown RBP12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 SKAP1Q86WV1 359 aa12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 ELMOD1Q8N336 334 aa12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 GBP3Q9H0R5 595 aa12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 USP25Q9UHP3 1055 aa12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 LAMC3Q9Y6N6 1575 aa12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 MYL3P08590 195 aa12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 P4HA1P13674 534 aa12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 ZNF445P59923 1031 aa12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 SUPT20HL1Q3ZLR7 823 aa12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 KIAA0825Q8IV33 1275 aa12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 CNPY2Q9Y2B0 182 aa12.23□□□□□ -0.45
CACNA1C-216ENST00000399638 PER1O15534 1290 aaPredicted RBP12.22□□□□□ -0.45
CACNA1C-216ENST00000399638 ERFEQ4G0M1 354 aa12.22□□□□□ -0.45
CACNA1C-216ENST00000399638 ZNF449Q6P9G9 518 aa12.22□□□□□ -0.45
CACNA1C-216ENST00000399638 FASTKD5Q7L8L6 764 aaKnown RBP12.22□□□□□ -0.45
CACNA1C-216ENST00000399638 ZNF830Q96NB3 372 aaPredicted RBP12.22□□□□□ -0.45
CACNA1C-216ENST00000399638 ADPGKQ9BRR6 497 aa12.22□□□□□ -0.45
CACNA1C-216ENST00000399638 CLRN2A0PK11 232 aa12.22□□□□□ -0.45
CACNA1C-216ENST00000399638 EPB41P11171 864 aaKnown RBP12.22□□□□□ -0.45
CACNA1C-216ENST00000399638 FAM196AQ6ZSG2 479 aa12.22□□□□□ -0.45
CACNA1C-216ENST00000399638 TEKT1Q969V4 418 aa12.22□□□□□ -0.45
CACNA1C-216ENST00000399638 DCAF5Q96JK2 942 aa12.22□□□□□ -0.45
CACNA1C-216ENST00000399638 MAP10Q9P2G4 905 aa12.22□□□□□ -0.45
CACNA1C-216ENST00000399638 PTPRCP08575 1304 aa12.22□□□□□ -0.45
CACNA1C-216ENST00000399638 CD19P15391 556 aa12.22□□□□□ -0.45
CACNA1C-216ENST00000399638 PAG1Q9NWQ8 432 aa12.22□□□□□ -0.45
CACNA1C-216ENST00000399638 DNAJC5BQ9UF47 199 aa12.22□□□□□ -0.45
CACNA1C-216ENST00000399638 TSHZ3Q63HK5 1081 aa12.22□□□□□ -0.45
CACNA1C-216ENST00000399638 CXorf38Q8TB03 319 aa12.22□□□□□ -0.45
CACNA1C-216ENST00000399638 MUM1L1Q5H9M0 696 aa12.22□□□□□ -0.45
CACNA1C-216ENST00000399638 FAM182BQ5T319 152 aa12.22□□□□□ -0.45
CACNA1C-216ENST00000399638 TTC22Q5TAA0 569 aa12.22□□□□□ -0.45
CACNA1C-216ENST00000399638 PZPP20742 1482 aa12.22□□□□□ -0.45
CACNA1C-216ENST00000399638 MCM3P25205 808 aa12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 IREB2P48200 963 aaKnown RBP12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 ZNF467Q7Z7K2 595 aaPredicted RBP12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 DEPTORQ8TB45 409 aa12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 PARP2Q9UGN5 583 aa12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 MAGI1Q96QZ7 1491 aaPredicted RBP12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 GRM8O00222 908 aa12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 CCNT1O60563 726 aaKnown RBP12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 PDE6AP16499 860 aa12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 FBLN1P23142 703 aa12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 TGFBRAP1Q8WUH2 860 aa12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 AKT3Q9Y243 479 aa12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 NOS1P29475 1434 aa12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 ATF7P17544 494 aaPredicted RBP12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 TMOD1P28289 359 aa12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 CCDC102BQ68D86 513 aa12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 SPECC1LQ69YQ0 1117 aa12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 CDC37L1Q7L3B6 337 aa12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 MAPKAPK5Q8IW41 473 aa12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 DHX58Q96C10 678 aa12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 FAM89AQ96GI7 184 aa12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 GPBP1L1Q9HC44 474 aaPredicted RBP12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 WDR46O15213 610 aaKnown RBP12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 SMC6Q96SB8 1091 aa12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 SUGCTQ9HAC7 445 aa12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 SLC8A2Q9UPR5 921 aa12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 ZBTB12Q9Y330 459 aaPredicted RBP12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 NUB1Q9Y5A7 615 aa12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 PAXBP1Q9Y5B6 917 aa12.21□□□□□ -0.45
CACNA1C-216ENST00000399638 GCP02774 474 aa12.21□□□□□ -0.46
CACNA1C-216ENST00000399638 ITGA6P23229 1130 aa12.21□□□□□ -0.46
CACNA1C-216ENST00000399638 KIF18AQ8NI77 898 aa12.21□□□□□ -0.46
CACNA1C-216ENST00000399638 TFIP11Q9UBB9 837 aaKnown RBP12.21□□□□□ -0.46
CACNA1C-216ENST00000399638 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms