RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 A0A1B0GUA9 196 aa16.03■□□□□ 0.16
TNRC18-203ENST00000399537 ARHGAP24Q8N264 748 aa16.03■□□□□ 0.16
TNRC18-203ENST00000399537 SH2D4AQ9H788 454 aa16.03■□□□□ 0.16
TNRC18-203ENST00000399537 EXOC7Q9UPT5 735 aa16.03■□□□□ 0.16
TNRC18-203ENST00000399537 GOLGA6BA6NDN3 693 aa16.03■□□□□ 0.16
TNRC18-203ENST00000399537 HGSO14964 777 aaPredicted RBP16.03■□□□□ 0.16
TNRC18-203ENST00000399537 LETM2Q2VYF4 491 aa16.03■□□□□ 0.16
TNRC18-203ENST00000399537 HHATQ5VTY9 493 aa16.03■□□□□ 0.16
TNRC18-203ENST00000399537 CDAN1Q8IWY9 1227 aa16.03■□□□□ 0.16
TNRC18-203ENST00000399537 PPP1R12CQ9BZL4 782 aa16.03■□□□□ 0.16
TNRC18-203ENST00000399537 PLCB1Q9NQ66 1216 aa16.03■□□□□ 0.16
TNRC18-203ENST00000399537 LMBR1LQ6UX01 489 aa16.03■□□□□ 0.16
TNRC18-203ENST00000399537 MAP3K5Q99683 1374 aa16.03■□□□□ 0.16
TNRC18-203ENST00000399537 NDUFAB1O14561 156 aa16.03■□□□□ 0.16
TNRC18-203ENST00000399537 PHLDB2Q86SQ0 1253 aa16.03■□□□□ 0.16
TNRC18-203ENST00000399537 RBM26Q5T8P6 1007 aaKnown RBP16.03■□□□□ 0.16
TNRC18-203ENST00000399537 ACEP12821 1306 aa16.03■□□□□ 0.16
TNRC18-203ENST00000399537 TRIM31Q9BZY9 425 aa16.03■□□□□ 0.16
TNRC18-203ENST00000399537 EIF4G3O43432 1585 aaKnown RBP16.03■□□□□ 0.16
TNRC18-203ENST00000399537 ZNF853P0CG23 659 aa16.02■□□□□ 0.16
TNRC18-203ENST00000399537 DENND2CQ68D51 928 aa16.02■□□□□ 0.16
TNRC18-203ENST00000399537 RSPH3Q86UC2 560 aa16.02■□□□□ 0.16
TNRC18-203ENST00000399537 URB2Q14146 1524 aaKnown RBP16.02■□□□□ 0.16
TNRC18-203ENST00000399537 SLC39A6Q13433 755 aa16.02■□□□□ 0.16
TNRC18-203ENST00000399537 ASIC3Q9UHC3 531 aa16.02■□□□□ 0.16
TNRC18-203ENST00000399537 TNNQ9UQP3 1299 aa16.02■□□□□ 0.16
TNRC18-203ENST00000399537 NACA2Q9H009 215 aa16.02■□□□□ 0.16
TNRC18-203ENST00000399537 PBRM1Q86U86 1689 aa16.02■□□□□ 0.16
TNRC18-203ENST00000399537 RFC1P35251 1148 aaPredicted RBP16.02■□□□□ 0.16
TNRC18-203ENST00000399537 GPATCH8Q9UKJ3 1502 aaKnown RBP16.02■□□□□ 0.15
TNRC18-203ENST00000399537 RAD50Q92878 1312 aa16.02■□□□□ 0.15
TNRC18-203ENST00000399537 ZBTB40Q9NUA8 1239 aa16.02■□□□□ 0.15
TNRC18-203ENST00000399537 RABGAP1Q9Y3P9 1069 aa16.02■□□□□ 0.15
TNRC18-203ENST00000399537 RIMS2Q9UQ26 1411 aa16.02■□□□□ 0.15
TNRC18-203ENST00000399537 COL17A1Q9UMD9 1497 aaPredicted RBP16.01■□□□□ 0.15
TNRC18-203ENST00000399537 CNGA1P29973 690 aa16.01■□□□□ 0.15
TNRC18-203ENST00000399537 DCTPP1Q9H773 170 aa16.01■□□□□ 0.15
TNRC18-203ENST00000399537 TTF2Q9UNY4 1162 aaKnown RBP16.01■□□□□ 0.15
TNRC18-203ENST00000399537 AFG3L2Q9Y4W6 797 aa16.01■□□□□ 0.15
TNRC18-203ENST00000399537 TUBB2AQ13885 445 aa16.01■□□□□ 0.15
TNRC18-203ENST00000399537 PDE1CQ14123 709 aaPredicted RBP16.01■□□□□ 0.15
TNRC18-203ENST00000399537 TUBB2BQ9BVA1 445 aa16.01■□□□□ 0.15
TNRC18-203ENST00000399537 NOP56O00567 594 aaKnown RBP16.01■□□□□ 0.15
TNRC18-203ENST00000399537 C14orf93Q9H972 538 aaKnown RBP16.01■□□□□ 0.15
TNRC18-203ENST00000399537 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.01■□□□□ 0.152e-6■■□□□ 14.4
TNRC18-203ENST00000399537 JDP2Q8WYK2 163 aa16.01■□□□□ 0.15
TNRC18-203ENST00000399537 RIMBP2O15034 1052 aa16.01■□□□□ 0.15
TNRC18-203ENST00000399537 HAUS3Q68CZ6 603 aa16.01■□□□□ 0.15
TNRC18-203ENST00000399537 BICC1Q9H694 974 aaKnown RBP16.01■□□□□ 0.15
TNRC18-203ENST00000399537 PLXNC1O60486 1568 aa16■□□□□ 0.15
TNRC18-203ENST00000399537 TBC1D8BQ0IIM8 1120 aa16■□□□□ 0.15
TNRC18-203ENST00000399537 FANCCQ00597 558 aa16■□□□□ 0.15
TNRC18-203ENST00000399537 AOX1Q06278 1338 aa16■□□□□ 0.15
TNRC18-203ENST00000399537 ARHGEF10LQ9HCE6 1279 aa16■□□□□ 0.15
TNRC18-203ENST00000399537 OAS2P29728 719 aaKnown RBP16■□□□□ 0.15
TNRC18-203ENST00000399537 RABEP2Q9H5N1 569 aa16■□□□□ 0.15
TNRC18-203ENST00000399537 CBX8Q9HC52 389 aa16■□□□□ 0.15
TNRC18-203ENST00000399537 ANO1Q5XXA6 986 aa16■□□□□ 0.15
TNRC18-203ENST00000399537 DDX27Q96GQ7 796 aaKnown RBP16■□□□□ 0.15
TNRC18-203ENST00000399537 RBM17Q96I25 401 aaKnown RBP16■□□□□ 0.15
TNRC18-203ENST00000399537 KCNH3Q9ULD8 1083 aa16■□□□□ 0.15
TNRC18-203ENST00000399537 ARHGEF35A5YM69 484 aa16■□□□□ 0.15
TNRC18-203ENST00000399537 NOD1Q9Y239 953 aa16■□□□□ 0.15
TNRC18-203ENST00000399537 OTUD7AQ8TE49 926 aaPredicted RBP15.99■□□□□ 0.15
TNRC18-203ENST00000399537 TMOD4Q9NZQ9 345 aa15.99■□□□□ 0.15
TNRC18-203ENST00000399537 TXNDC9O14530 226 aa15.99■□□□□ 0.15
TNRC18-203ENST00000399537 MBD4O95243 580 aa15.99■□□□□ 0.15
TNRC18-203ENST00000399537 DZIP3Q86Y13 1208 aaKnown RBP15.99■□□□□ 0.15
TNRC18-203ENST00000399537 SECISBP2LQ93073 1101 aaKnown RBP15.99■□□□□ 0.15
TNRC18-203ENST00000399537 PDE4DQ08499 809 aa15.99■□□□□ 0.15
TNRC18-203ENST00000399537 PAK1Q13153 545 aa15.99■□□□□ 0.15
TNRC18-203ENST00000399537 KMT5BQ4FZB7 885 aa15.99■□□□□ 0.15
TNRC18-203ENST00000399537 DCUN1D2Q6PH85 259 aa15.99■□□□□ 0.15
TNRC18-203ENST00000399537 IRS4O14654 1257 aaPredicted RBP15.99■□□□□ 0.15
TNRC18-203ENST00000399537 EYA3Q99504 573 aa15.99■□□□□ 0.15
TNRC18-203ENST00000399537 RPS6KB1P23443 525 aa15.99■□□□□ 0.15
TNRC18-203ENST00000399537 SYCE1Q8N0S2 351 aa15.99■□□□□ 0.15
TNRC18-203ENST00000399537 PPP1R2P41236 205 aa15.99■□□□□ 0.15
TNRC18-203ENST00000399537 STK24Q9Y6E0 443 aa15.99■□□□□ 0.15
TNRC18-203ENST00000399537 TBC1D8O95759 1140 aa15.99■□□□□ 0.15
TNRC18-203ENST00000399537 NSMCE1Q8WV22 266 aa15.99■□□□□ 0.15
TNRC18-203ENST00000399537 VPS16Q9H269 839 aa15.99■□□□□ 0.15
TNRC18-203ENST00000399537 USTQ9Y2C2 406 aa15.99■□□□□ 0.15
TNRC18-203ENST00000399537 TTLL3Q9Y4R7 772 aa15.99■□□□□ 0.15
TNRC18-203ENST00000399537 RAB3IPQ96QF0 476 aaPredicted RBP15.98■□□□□ 0.15
TNRC18-203ENST00000399537 TBC1D7Q9P0N9 293 aa15.98■□□□□ 0.15
TNRC18-203ENST00000399537 PPARDQ03181 441 aa15.98■□□□□ 0.15
TNRC18-203ENST00000399537 C8orf37Q96NL8 207 aa15.98■□□□□ 0.15
TNRC18-203ENST00000399537 PIK3AP1Q6ZUJ8 805 aa15.98■□□□□ 0.15
TNRC18-203ENST00000399537 POLR2DO15514 142 aaKnown RBP15.98■□□□□ 0.15
TNRC18-203ENST00000399537 HELBQ8NG08 1087 aaPredicted RBP15.98■□□□□ 0.15
TNRC18-203ENST00000399537 FCHSD1Q86WN1 690 aa15.98■□□□□ 0.15
TNRC18-203ENST00000399537 MTMR3Q13615 1198 aa15.98■□□□□ 0.15
TNRC18-203ENST00000399537 CSGALNACT2Q8N6G5 542 aa15.98■□□□□ 0.15
TNRC18-203ENST00000399537 ZNF526Q8TF50 670 aaPredicted RBP15.98■□□□□ 0.15
TNRC18-203ENST00000399537 TRPM2O94759 1503 aa15.98■□□□□ 0.15
TNRC18-203ENST00000399537 FBXO31Q5XUX0 539 aaPredicted RBP15.97■□□□□ 0.15
TNRC18-203ENST00000399537 TEX11Q8IYF3 940 aa15.97■□□□□ 0.15
TNRC18-203ENST00000399537 CTTNBP2NLQ9P2B4 639 aa15.97■□□□□ 0.15
TNRC18-203ENST00000399537 BLMP54132 1417 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms