RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 LGSNQ5TDP6 509 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 TRIML1Q8N9V2 468 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 NT5C3AQ9H0P0 336 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 TMOD4Q9NZQ9 345 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 BCAP29Q9UHQ4 241 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 VWA3AA6NCI4 1184 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 BCRP11274 1271 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 PCP11498 1178 aaKnown RBP9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 EYA1Q99502 592 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 ZC3H12CQ9C0D7 883 aaKnown RBP9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 TOM1O60784 492 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 RGS22Q8NE09 1264 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 LPIN2Q92539 896 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 ARPP21Q9UBL0 812 aaPredicted RBP9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 AGTPBP1Q9UPW5 1226 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 PPFIA4O75335 1185 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 TBC1D8BQ0IIM8 1120 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 BRD3Q15059 726 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 NONOQ15233 471 aaKnown RBP eCLIP9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 INF2Q27J81 1249 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 CCDC117Q8IWD4 279 aaPredicted RBP9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 KCNK9Q9NPC2 374 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 PPFIA1Q13136 1202 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 POSTNQ15063 836 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 CCDC84Q86UT8 332 aaPredicted RBP9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 IWS1Q96ST2 819 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 RAB17Q9H0T7 212 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 GOLGA8KD6RF30 607 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 TRAF5O00463 557 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 CCNT1O60563 726 aaKnown RBP9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 N4BP1O75113 896 aaKnown RBP9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 FLOT1O75955 427 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 RHOXF2BP0C7M4 288 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 DCAF17Q5H9S7 520 aaPredicted RBP9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 ZNF354CQ86Y25 554 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 KBTBD3Q8NAB2 608 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 GOLGA5Q8TBA6 731 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 RHOXF2Q9BQY4 288 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 FAM204AQ9H8W3 233 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 TTC37Q6PGP7 1564 aa9.32□□□□□ -0.92
SPTLC3-201ENST00000399002 RNF123Q5XPI4 1314 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 CHL1O00533 1208 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 HIBADHP31937 336 aaKnown RBP9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 PLCB3Q01970 1234 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 CFAP221Q4G0U5 840 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 GRK7Q8WTQ7 553 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 LEO1Q8WVC0 666 aaPredicted RBP9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 ZNF274Q96GC6 653 aaPredicted RBP9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 RAPGEF1Q13905 1077 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 ZNF174Q15697 407 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 NBPF14Q5TI25 921 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 P3H4Q92791 437 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 XAGE2Q96GT9 111 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 NEO1Q92859 1461 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 RLBP1P12271 317 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 KIF11P52732 1056 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 TEX11Q8IYF3 940 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 CSGALNACT2Q8N6G5 542 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 SLC52A2Q9HAB3 445 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 CBX8Q9HC52 389 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 GOLGA6CA6NDK9 693 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 SPOPO43791 374 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 GOLGA6DP0CG33 693 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 KRT5P13647 590 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 ITGA6P23229 1130 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 GBP6Q6ZN66 633 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 NFATC2IPQ8NCF5 419 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 VCXQ9H320 206 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 GOLGA6AQ9NYA3 693 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 FEZ2Q9UHY8 353 aaPredicted RBP9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 ABCC4O15439 1325 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 H0YCG3 227 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 TPD52P55327 224 aaPredicted RBP9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 APBA1Q02410 837 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 SLC39A6Q13433 755 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 SFMBT2Q5VUG0 894 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 TCHPQ9BT92 498 aa9.31□□□□□ -0.92
SPTLC3-201ENST00000399002 MYOM2P54296 1465 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 A0A1B0GUA9 196 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 ATP2C2O75185 946 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 STX17P56962 302 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 SEPT6Q14141 434 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 CWF19L2Q2TBE0 894 aaKnown RBP9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 CCT6BQ92526 530 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 VTI1AQ96AJ9 217 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 ERBB4Q15303 1308 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 ANXA1P04083 346 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 IBSPP21815 317 aaPredicted RBP9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 ARID5AQ03989 594 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 ITIH3Q06033 890 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 CHRNA2Q15822 529 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 TSPYL6Q8N831 410 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 SLC17A8Q8NDX2 589 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 WWC3Q9ULE0 1092 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 RGS12O14924 1447 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 A0A1B0GVL5 298 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 ATP5JP18859 108 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 POLD1P28340 1107 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 IRX4P78413 519 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 TSNAXIP1Q2TAA8 658 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms