RNA–Protein interactions for RNA: ENST00000398975.6

COL13A1-204, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 1,057 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-204ENST00000398975 PPIL2Q13356 520 aa17.53■□□□□ 0.4
COL13A1-204ENST00000398975 SLC4A8Q2Y0W8 1093 aa17.53■□□□□ 0.4
COL13A1-204ENST00000398975 TMED8Q6PL24 325 aaPredicted RBP17.53■□□□□ 0.4
COL13A1-204ENST00000398975 CCDC84Q86UT8 332 aaPredicted RBP17.53■□□□□ 0.4
COL13A1-204ENST00000398975 SHROOM1Q2M3G4 852 aaPredicted RBP17.52■□□□□ 0.4
COL13A1-204ENST00000398975 METTL16Q86W50 562 aaKnown RBP17.52■□□□□ 0.4
COL13A1-204ENST00000398975 SCYL3Q8IZE3 742 aa17.52■□□□□ 0.4
COL13A1-204ENST00000398975 ARMT1Q9H993 441 aa17.52■□□□□ 0.4
COL13A1-204ENST00000398975 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.52■□□□□ 0.4
COL13A1-204ENST00000398975 TTC41PQ6P2S7 1318 aa17.51■□□□□ 0.39
COL13A1-204ENST00000398975 PTPRFP10586 1907 aa17.51■□□□□ 0.39
COL13A1-204ENST00000398975 CCL15-CCL14A0A0B4J2E2 113 aa17.51■□□□□ 0.39
COL13A1-204ENST00000398975 MX1P20591 662 aa17.51■□□□□ 0.39
COL13A1-204ENST00000398975 INHBEP58166 350 aa17.51■□□□□ 0.39
COL13A1-204ENST00000398975 PPATQ06203 517 aa17.51■□□□□ 0.39
COL13A1-204ENST00000398975 MOGSQ13724 837 aa17.51■□□□□ 0.39
COL13A1-204ENST00000398975 CCL15Q16663 113 aa17.51■□□□□ 0.39
COL13A1-204ENST00000398975 GPATCH3Q96I76 525 aa17.51■□□□□ 0.39
COL13A1-204ENST00000398975 CFHR5Q9BXR6 569 aa17.51■□□□□ 0.39
COL13A1-204ENST00000398975 PI4KBQ9UBF8 816 aa17.51■□□□□ 0.39
COL13A1-204ENST00000398975 KCNH4Q9UQ05 1017 aa17.51■□□□□ 0.39
COL13A1-204ENST00000398975 PRKAB2O43741 272 aa17.5■□□□□ 0.39
COL13A1-204ENST00000398975 CTNND1O60716 968 aaKnown RBP17.5■□□□□ 0.39
COL13A1-204ENST00000398975 MBD4O95243 580 aa17.5■□□□□ 0.39
COL13A1-204ENST00000398975 PTPRAP18433 802 aa17.5■□□□□ 0.39
COL13A1-204ENST00000398975 USP5P45974 858 aa17.5■□□□□ 0.39
COL13A1-204ENST00000398975 GTF2A2P52657 109 aa17.5■□□□□ 0.39
COL13A1-204ENST00000398975 UBE3CQ15386 1083 aa17.5■□□□□ 0.39
COL13A1-204ENST00000398975 TNS4Q8IZW8 715 aa17.5■□□□□ 0.39
COL13A1-204ENST00000398975 FAM43AQ8N2R8 423 aa17.5■□□□□ 0.39
COL13A1-204ENST00000398975 KBTBD3Q8NAB2 608 aa17.5■□□□□ 0.39
COL13A1-204ENST00000398975 SDR42E1Q8WUS8 393 aa17.5■□□□□ 0.39
COL13A1-204ENST00000398975 LNPKQ9C0E8 428 aa17.5■□□□□ 0.39
COL13A1-204ENST00000398975 PUS7LQ9H0K6 701 aaKnown RBP17.5■□□□□ 0.39
COL13A1-204ENST00000398975 DHX36Q9H2U1 1008 aaKnown RBP17.5■□□□□ 0.39
COL13A1-204ENST00000398975 RWDD1Q9H446 243 aaPredicted RBP17.5■□□□□ 0.39
COL13A1-204ENST00000398975 STAP2Q9UGK3 403 aa17.5■□□□□ 0.39
COL13A1-204ENST00000398975 BAZ2AQ9UIF9 1905 aaKnown RBP17.49■□□□□ 0.39
COL13A1-204ENST00000398975 B4GALNT3Q6L9W6 998 aa17.49■□□□□ 0.39
COL13A1-204ENST00000398975 CERS3Q8IU89 383 aa17.49■□□□□ 0.39
COL13A1-204ENST00000398975 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.49■□□□□ 0.39
COL13A1-204ENST00000398975 HERC5Q9UII4 1024 aaKnown RBP17.49■□□□□ 0.39
COL13A1-204ENST00000398975 BTBD19C9JJ37 291 aa17.48■□□□□ 0.39
COL13A1-204ENST00000398975 SMIM22K7EJ46 135 aa17.48■□□□□ 0.39
COL13A1-204ENST00000398975 CYP2D6P10635 497 aa17.48■□□□□ 0.39
COL13A1-204ENST00000398975 CAP2P40123 477 aa17.48■□□□□ 0.39
COL13A1-204ENST00000398975 PLCD1P51178 756 aa17.48■□□□□ 0.39
COL13A1-204ENST00000398975 PDE1AP54750 535 aa17.48■□□□□ 0.39
COL13A1-204ENST00000398975 CRHR2Q13324 411 aa17.48■□□□□ 0.39
COL13A1-204ENST00000398975 SNAPC2Q13487 334 aa17.48■□□□□ 0.39
COL13A1-204ENST00000398975 ZNF296Q8WUU4 475 aaPredicted RBP17.48■□□□□ 0.39
COL13A1-204ENST00000398975 DCP1AQ9NPI6 582 aaPredicted RBP17.48■□□□□ 0.39
COL13A1-204ENST00000398975 AFG3L2Q9Y4W6 797 aa17.48■□□□□ 0.39
COL13A1-204ENST00000398975 ZHX2Q9Y6X8 837 aa17.48■□□□□ 0.39
COL13A1-204ENST00000398975 GPR25O00155 361 aa17.47■□□□□ 0.39
COL13A1-204ENST00000398975 GLRX3O76003 335 aaKnown RBP17.47■□□□□ 0.39
COL13A1-204ENST00000398975 CETPP11597 493 aa17.47■□□□□ 0.39
COL13A1-204ENST00000398975 CAP1Q01518 475 aa17.47■□□□□ 0.39
COL13A1-204ENST00000398975 FOXP4Q8IVH2 680 aaPredicted RBP17.47■□□□□ 0.39
COL13A1-204ENST00000398975 OSBP2Q969R2 916 aa17.47■□□□□ 0.39
COL13A1-204ENST00000398975 CRNKL1Q9BZJ0 848 aaKnown RBP17.47■□□□□ 0.39
COL13A1-204ENST00000398975 PICK1Q9NRD5 415 aa17.47■□□□□ 0.39
COL13A1-204ENST00000398975 RNF113AO15541 343 aaKnown RBP17.46■□□□□ 0.39
COL13A1-204ENST00000398975 ALDH1A1P00352 501 aa17.46■□□□□ 0.39
COL13A1-204ENST00000398975 NUCB1Q02818 461 aa17.46■□□□□ 0.39
COL13A1-204ENST00000398975 M0R2C6 588 aa17.45■□□□□ 0.38
COL13A1-204ENST00000398975 CXCL11O14625 94 aa17.45■□□□□ 0.38
COL13A1-204ENST00000398975 ERC2O15083 957 aa17.45■□□□□ 0.38
COL13A1-204ENST00000398975 GDF11O95390 407 aa17.45■□□□□ 0.38
COL13A1-204ENST00000398975 GABPAQ06546 454 aa17.45■□□□□ 0.38
COL13A1-204ENST00000398975 NOM1Q5C9Z4 860 aaKnown RBP17.45■□□□□ 0.38
COL13A1-204ENST00000398975 GPAT2Q6NUI2 795 aa17.45■□□□□ 0.38
COL13A1-204ENST00000398975 CHD1LQ86WJ1 897 aa17.45■□□□□ 0.38
COL13A1-204ENST00000398975 CRACR2BQ8N4Y2 399 aaPredicted RBP17.45■□□□□ 0.38
COL13A1-204ENST00000398975 STRBPQ96SI9 672 aaKnown RBP17.45■□□□□ 0.38
COL13A1-204ENST00000398975 EHD4Q9H223 541 aa17.45■□□□□ 0.38
COL13A1-204ENST00000398975 CYP2D7A0A087X1C5 515 aa17.44■□□□□ 0.38
COL13A1-204ENST00000398975 A0A0G2JLL6 359 aaPredicted RBP17.44■□□□□ 0.38
COL13A1-204ENST00000398975 HLA-DOAP06340 250 aa17.44■□□□□ 0.38
COL13A1-204ENST00000398975 SHMT1P34896 483 aa17.44■□□□□ 0.38
COL13A1-204ENST00000398975 DGKZQ13574 1117 aa17.44■□□□□ 0.38
COL13A1-204ENST00000398975 ZSCAN25Q6NSZ9 544 aa17.44■□□□□ 0.38
COL13A1-204ENST00000398975 TATDN1Q6P1N9 297 aa17.44■□□□□ 0.38
COL13A1-204ENST00000398975 PRRT2Q7Z6L0 340 aaPredicted RBP17.44■□□□□ 0.38
COL13A1-204ENST00000398975 APPBP2Q92624 585 aa17.44■□□□□ 0.38
COL13A1-204ENST00000398975 SEC62Q99442 399 aaKnown RBP17.44■□□□□ 0.38
COL13A1-204ENST00000398975 MCM9Q9NXL9 1143 aa17.44■□□□□ 0.38
COL13A1-204ENST00000398975 SERPINB13Q9UIV8 391 aa17.44■□□□□ 0.38
COL13A1-204ENST00000398975 LOC285556D6RIA3 1793 aa17.43■□□□□ 0.38
COL13A1-204ENST00000398975 ZSWIM8A7E2V4 1837 aa17.43■□□□□ 0.38
COL13A1-204ENST00000398975 TRIM75PA6NK02 468 aa17.43■□□□□ 0.38
COL13A1-204ENST00000398975 TAF1CQ15572 869 aaPredicted RBP17.43■□□□□ 0.38
COL13A1-204ENST00000398975 OTUD7BQ6GQQ9 843 aa17.43■□□□□ 0.38
COL13A1-204ENST00000398975 PLEKHM2Q8IWE5 1019 aa17.43■□□□□ 0.38
COL13A1-204ENST00000398975 SLC44A5Q8NCS7 719 aa17.43■□□□□ 0.38
COL13A1-204ENST00000398975 MCOLN1Q9GZU1 580 aa17.43■□□□□ 0.38
COL13A1-204ENST00000398975 ZBTB47Q9UFB7 747 aaPredicted RBP17.43■□□□□ 0.38
COL13A1-204ENST00000398975 FKTNO75072 461 aa17.42■□□□□ 0.38
COL13A1-204ENST00000398975 POLR3DP05423 398 aaPredicted RBP17.42■□□□□ 0.38
COL13A1-204ENST00000398975 SPP2Q13103 211 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms