RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 NBPF11Q86T75 865 aa16■□□□□ 0.15
PRAME-202ENST00000398743 FANCBQ8NB91 859 aa16■□□□□ 0.15
PRAME-202ENST00000398743 FBXW7Q969H0 707 aa16■□□□□ 0.15
PRAME-202ENST00000398743 BPIFA3Q9BQP9 254 aa16■□□□□ 0.15
PRAME-202ENST00000398743 EIF4ENIF1Q9NRA8 985 aaKnown RBP16■□□□□ 0.15
PRAME-202ENST00000398743 SRP68Q9UHB9 627 aaKnown RBP16■□□□□ 0.15
PRAME-202ENST00000398743 TNKSO95271 1327 aa16■□□□□ 0.15
PRAME-202ENST00000398743 CACNA1SQ13698 1873 aa15.99■□□□□ 0.15
PRAME-202ENST00000398743 GNPATO15228 680 aa15.99■□□□□ 0.15
PRAME-202ENST00000398743 RBM6P78332 1123 aaKnown RBP15.99■□□□□ 0.15
PRAME-202ENST00000398743 CRACR2BQ8N4Y2 399 aaPredicted RBP15.99■□□□□ 0.15
PRAME-202ENST00000398743 NUP133Q8WUM0 1156 aa15.99■□□□□ 0.15
PRAME-202ENST00000398743 HPSEQ9Y251 543 aa15.99■□□□□ 0.15
PRAME-202ENST00000398743 PDS5AQ29RF7 1337 aaKnown RBP15.99■□□□□ 0.15
PRAME-202ENST00000398743 DYNLL1P63167 89 aaKnown RBP15.99■□□□□ 0.15
PRAME-202ENST00000398743 PPP2R5BQ15173 497 aa15.99■□□□□ 0.15
PRAME-202ENST00000398743 SEC23AQ15436 765 aa15.99■□□□□ 0.15
PRAME-202ENST00000398743 DPCR1Q3MIW9 517 aa15.99■□□□□ 0.15
PRAME-202ENST00000398743 SHC4Q6S5L8 630 aa15.99■□□□□ 0.15
PRAME-202ENST00000398743 DIS3L2Q8IYB7 885 aaKnown RBP15.99■□□□□ 0.15
PRAME-202ENST00000398743 PRIMPOLQ96LW4 560 aa15.99■□□□□ 0.15
PRAME-202ENST00000398743 ANKRD2Q9GZV1 360 aa15.99■□□□□ 0.15
PRAME-202ENST00000398743 CASZ1Q86V15 1759 aa15.98■□□□□ 0.15
PRAME-202ENST00000398743 FAM237AA0A1B0GTK4 181 aa15.98■□□□□ 0.15
PRAME-202ENST00000398743 BTBD18B2RXH4 712 aa15.98■□□□□ 0.15
PRAME-202ENST00000398743 CUTAO60888 179 aa15.98■□□□□ 0.15
PRAME-202ENST00000398743 PCP11498 1178 aaKnown RBP15.98■□□□□ 0.15
PRAME-202ENST00000398743 RESP18Q5W5W9 173 aa15.98■□□□□ 0.15
PRAME-202ENST00000398743 TPTE2Q6XPS3 522 aa15.98■□□□□ 0.15
PRAME-202ENST00000398743 CCDC82Q8N4S0 544 aa15.98■□□□□ 0.15
PRAME-202ENST00000398743 ZNF384Q8TF68 577 aa15.98■□□□□ 0.15
PRAME-202ENST00000398743 FOXP1Q9H334 677 aaPredicted RBP15.98■□□□□ 0.15
PRAME-202ENST00000398743 KLRK1P26718 216 aa15.97■□□□□ 0.15
PRAME-202ENST00000398743 NLRP12P59046 1061 aa15.97■□□□□ 0.15
PRAME-202ENST00000398743 LRMPQ12912 555 aa15.97■□□□□ 0.15
PRAME-202ENST00000398743 CMTR1Q8N1G2 835 aaKnown RBP15.97■□□□□ 0.15
PRAME-202ENST00000398743 NSUN4Q96CB9 384 aaKnown RBP15.97■□□□□ 0.15
PRAME-202ENST00000398743 ZSCAN10Q96SZ4 725 aaPredicted RBP15.97■□□□□ 0.15
PRAME-202ENST00000398743 KCNJ14Q9UNX9 436 aa15.97■□□□□ 0.15
PRAME-202ENST00000398743 RTCBQ9Y3I0 505 aaKnown RBP15.97■□□□□ 0.15
PRAME-202ENST00000398743 DUOX1Q9NRD9 1551 aa15.97■□□□□ 0.15
PRAME-202ENST00000398743 TAF1P21675 1872 aa15.97■□□□□ 0.15
PRAME-202ENST00000398743 COL24A1Q17RW2 1714 aa15.97■□□□□ 0.15
PRAME-202ENST00000398743 HIBADHP31937 336 aaKnown RBP15.97■□□□□ 0.15
PRAME-202ENST00000398743 CCDC144BQ3MJ40 725 aa15.97■□□□□ 0.15
PRAME-202ENST00000398743 RNF26Q9BY78 433 aaPredicted RBP15.97■□□□□ 0.15
PRAME-202ENST00000398743 CCNL1Q9UK58 526 aaPredicted RBP15.97■□□□□ 0.15
PRAME-202ENST00000398743 DYNC1I1O14576 645 aa15.96■□□□□ 0.15
PRAME-202ENST00000398743 RILPL1Q5EBL4 403 aa15.96■□□□□ 0.15
PRAME-202ENST00000398743 IQCA1Q86XH1 822 aa15.96■□□□□ 0.15
PRAME-202ENST00000398743 ENAHQ8N8S7 591 aaPredicted RBP15.96■□□□□ 0.15
PRAME-202ENST00000398743 KRI1Q8N9T8 703 aaKnown RBP15.96■□□□□ 0.15
PRAME-202ENST00000398743 CLIC6Q96NY7 704 aa15.96■□□□□ 0.15
PRAME-202ENST00000398743 CYP2D7A0A087X1C5 515 aa15.96■□□□□ 0.14
PRAME-202ENST00000398743 SMIM22K7EJ46 135 aa15.96■□□□□ 0.14
PRAME-202ENST00000398743 BIN1O00499 593 aa15.96■□□□□ 0.14
PRAME-202ENST00000398743 MECOMQ03112 1051 aa15.96■□□□□ 0.14
PRAME-202ENST00000398743 IFIT1BQ5T764 474 aaKnown RBP15.96■□□□□ 0.14
PRAME-202ENST00000398743 CTR9Q6PD62 1173 aa15.96■□□□□ 0.14
PRAME-202ENST00000398743 FNBP4Q8N3X1 1017 aaPredicted RBP15.96■□□□□ 0.14
PRAME-202ENST00000398743 MYRIPQ8NFW9 859 aa15.96■□□□□ 0.14
PRAME-202ENST00000398743 TFCP2L1Q9NZI6 479 aa15.96■□□□□ 0.14
PRAME-202ENST00000398743 RRP9O43818 475 aaKnown RBP15.95■□□□□ 0.14
PRAME-202ENST00000398743 NEMFO60524 1076 aa15.95■□□□□ 0.14
PRAME-202ENST00000398743 FGRP09769 529 aa15.95■□□□□ 0.14
PRAME-202ENST00000398743 TPM4P67936 248 aa15.95■□□□□ 0.14
PRAME-202ENST00000398743 AKAP17AQ02040 695 aaKnown RBP15.95■□□□□ 0.14
PRAME-202ENST00000398743 CATIPQ7Z7H3 387 aa15.95■□□□□ 0.14
PRAME-202ENST00000398743 CACTINQ8WUQ7 758 aaKnown RBP15.95■□□□□ 0.14
PRAME-202ENST00000398743 TUBE1Q9UJT0 475 aa15.95■□□□□ 0.14
PRAME-202ENST00000398743 XBP1P17861 261 aa15.94■□□□□ 0.14
PRAME-202ENST00000398743 BTAF1O14981 1849 aa15.94■□□□□ 0.14
PRAME-202ENST00000398743 SMTNL1A8MU46 457 aa15.94■□□□□ 0.14
PRAME-202ENST00000398743 USP17L12C9JPN9 530 aa15.94■□□□□ 0.14
PRAME-202ENST00000398743 USP17L21D6R901 530 aa15.94■□□□□ 0.14
PRAME-202ENST00000398743 PRDM1O75626 825 aa15.94■□□□□ 0.14
PRAME-202ENST00000398743 TOB1P50616 345 aaPredicted RBP15.94■□□□□ 0.14
PRAME-202ENST00000398743 CHAF1AQ13111 956 aaPredicted RBP15.94■□□□□ 0.14
PRAME-202ENST00000398743 HSP90AA2PQ14568 343 aaPredicted RBP15.94■□□□□ 0.14
PRAME-202ENST00000398743 TMED8Q6PL24 325 aaPredicted RBP15.94■□□□□ 0.14
PRAME-202ENST00000398743 LRRC8AQ8IWT6 810 aa15.94■□□□□ 0.14
PRAME-202ENST00000398743 CCDC24Q8N4L8 307 aa15.94■□□□□ 0.14
PRAME-202ENST00000398743 ARHGEF1Q92888 912 aaKnown RBP15.94■□□□□ 0.14
PRAME-202ENST00000398743 CRNKL1Q9BZJ0 848 aaKnown RBP15.94■□□□□ 0.14
PRAME-202ENST00000398743 RBM28Q9NW13 759 aaKnown RBP15.94■□□□□ 0.14
PRAME-202ENST00000398743 AATFQ9NY61 560 aaKnown RBP eCLIP15.94■□□□□ 0.143e-7■□□□□ 9.1
PRAME-202ENST00000398743 KCNH3Q9ULD8 1083 aa15.94■□□□□ 0.14
PRAME-202ENST00000398743 NHSQ6T4R5 1651 aa15.94■□□□□ 0.14
PRAME-202ENST00000398743 NPHP1O15259 732 aa15.93■□□□□ 0.14
PRAME-202ENST00000398743 CALM1P0DP23 149 aa15.93■□□□□ 0.14
PRAME-202ENST00000398743 CALM2P0DP24 149 aa15.93■□□□□ 0.14
PRAME-202ENST00000398743 CALM3P0DP25 149 aa15.93■□□□□ 0.14
PRAME-202ENST00000398743 NR5A1Q13285 461 aa15.93■□□□□ 0.14
PRAME-202ENST00000398743 ATP8A2Q9NTI2 1148 aa15.93■□□□□ 0.14
PRAME-202ENST00000398743 USP21Q9UK80 565 aa15.93■□□□□ 0.14
PRAME-202ENST00000398743 PRDX5P30044 214 aa15.93■□□□□ 0.14
PRAME-202ENST00000398743 CNNM3Q8NE01 707 aa15.93■□□□□ 0.14
PRAME-202ENST00000398743 DCP1AQ9NPI6 582 aaPredicted RBP15.93■□□□□ 0.14
PRAME-202ENST00000398743 CEP131Q9UPN4 1083 aa15.93■□□□□ 0.14
PRAME-202ENST00000398743 UBAP1LF5GYI3 381 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms