RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 RBM27Q9P2N5 1060 aaKnown RBP14.87□□□□□ -0.03
TFF3-202ENST00000398431 TNPO2O14787 897 aaKnown RBP14.86□□□□□ -0.03
TFF3-202ENST00000398431 BCAR3O75815 825 aa14.86□□□□□ -0.03
TFF3-202ENST00000398431 TRIM27P14373 513 aa14.86□□□□□ -0.03
TFF3-202ENST00000398431 CAP2P40123 477 aa14.86□□□□□ -0.03
TFF3-202ENST00000398431 DIEXFQ68CQ4 756 aaKnown RBP14.86□□□□□ -0.03
TFF3-202ENST00000398431 GNAI2P04899 355 aa14.85□□□□□ -0.03
TFF3-202ENST00000398431 INHAP05111 366 aa14.85□□□□□ -0.03
TFF3-202ENST00000398431 GSTO1P78417 241 aa14.85□□□□□ -0.03
TFF3-202ENST00000398431 JAG1P78504 1218 aa14.85□□□□□ -0.03
TFF3-202ENST00000398431 PROCA1Q8NCQ7 364 aaPredicted RBP14.85□□□□□ -0.03
TFF3-202ENST00000398431 ZNF280CQ8ND82 737 aa14.85□□□□□ -0.03
TFF3-202ENST00000398431 SMCR8Q8TEV9 937 aaPredicted RBP14.85□□□□□ -0.03
TFF3-202ENST00000398431 RAI14Q9P0K7 980 aa14.85□□□□□ -0.03
TFF3-202ENST00000398431 FARP2O94887 1054 aaPredicted RBP14.84□□□□□ -0.03
TFF3-202ENST00000398431 G3BP1Q13283 466 aaKnown RBP eCLIP14.84□□□□□ -0.03
TFF3-202ENST00000398431 FAM110CQ1W6H9 321 aa14.84□□□□□ -0.03
TFF3-202ENST00000398431 SH3D19Q5HYK7 790 aa14.84□□□□□ -0.03
TFF3-202ENST00000398431 ATF7IPQ6VMQ6 1270 aa14.84□□□□□ -0.03
TFF3-202ENST00000398431 SH3RF3Q8TEJ3 882 aaPredicted RBP14.84□□□□□ -0.03
TFF3-202ENST00000398431 DEFB118Q96PH6 123 aa14.84□□□□□ -0.03
TFF3-202ENST00000398431 HTATIP2Q9BUP3 242 aa14.84□□□□□ -0.03
TFF3-202ENST00000398431 PAK6Q9NQU5 681 aaPredicted RBP14.84□□□□□ -0.03
TFF3-202ENST00000398431 GJD2Q9UKL4 321 aa14.84□□□□□ -0.03
TFF3-202ENST00000398431 COL2A1P02458 1487 aaPredicted RBP14.83□□□□□ -0.03
TFF3-202ENST00000398431 ZBTB7BO15156 539 aaPredicted RBP14.83□□□□□ -0.04
TFF3-202ENST00000398431 IPO8O15397 1037 aaKnown RBP14.83□□□□□ -0.04
TFF3-202ENST00000398431 HMGCS2P54868 508 aa14.83□□□□□ -0.04
TFF3-202ENST00000398431 PPP4CP60510 307 aa14.83□□□□□ -0.04
TFF3-202ENST00000398431 POLA2Q14181 598 aa14.83□□□□□ -0.04
TFF3-202ENST00000398431 GORABQ5T7V8 394 aa14.83□□□□□ -0.04
TFF3-202ENST00000398431 TEX11Q8IYF3 940 aa14.83□□□□□ -0.04
TFF3-202ENST00000398431 CLUAP1Q96AJ1 413 aa14.83□□□□□ -0.04
TFF3-202ENST00000398431 CRISPLD2Q9H0B8 497 aa14.83□□□□□ -0.04
TFF3-202ENST00000398431 SNRKQ9NRH2 765 aa14.83□□□□□ -0.04
TFF3-202ENST00000398431 USP17L5A8MUK1 530 aa14.82□□□□□ -0.04
TFF3-202ENST00000398431 CCER2I3L3R5 266 aa14.82□□□□□ -0.04
TFF3-202ENST00000398431 TFRCP02786 760 aaKnown RBP14.82□□□□□ -0.04
TFF3-202ENST00000398431 UQCRFS1P1P0C7P4 283 aa14.82□□□□□ -0.04
TFF3-202ENST00000398431 ADGRA1Q86SQ6 560 aa14.82□□□□□ -0.04
TFF3-202ENST00000398431 METTL16Q86W50 562 aaKnown RBP14.82□□□□□ -0.04
TFF3-202ENST00000398431 COA7Q96BR5 231 aa14.82□□□□□ -0.04
TFF3-202ENST00000398431 WDR18Q9BV38 432 aa14.82□□□□□ -0.04
TFF3-202ENST00000398431 TBC1D2Q9BYX2 928 aa14.82□□□□□ -0.04
TFF3-202ENST00000398431 ASCC2Q9H1I8 757 aaPredicted RBP14.82□□□□□ -0.04
TFF3-202ENST00000398431 LRP2BPQ9P2M1 347 aa14.82□□□□□ -0.04
TFF3-202ENST00000398431 PI4KBQ9UBF8 816 aa14.82□□□□□ -0.04
TFF3-202ENST00000398431 HERC5Q9UII4 1024 aaKnown RBP14.82□□□□□ -0.04
TFF3-202ENST00000398431 PNMA3Q9UL41 463 aa14.82□□□□□ -0.04
TFF3-202ENST00000398431 SIPA1L1O43166 1804 aa14.82□□□□□ -0.04
TFF3-202ENST00000398431 ATAD5Q96QE3 1844 aa14.82□□□□□ -0.04
TFF3-202ENST00000398431 LOC285556D6RIA3 1793 aa14.81□□□□□ -0.04
TFF3-202ENST00000398431 CYP2E1P05181 493 aaPredicted RBP14.81□□□□□ -0.04
TFF3-202ENST00000398431 CAPN2P17655 700 aa14.81□□□□□ -0.04
TFF3-202ENST00000398431 GCLCP48506 637 aaPredicted RBP14.81□□□□□ -0.04
TFF3-202ENST00000398431 ATP8B2P98198 1209 aa14.81□□□□□ -0.04
TFF3-202ENST00000398431 SHROOM1Q2M3G4 852 aaPredicted RBP14.81□□□□□ -0.04
TFF3-202ENST00000398431 TMEM57Q8N5G2 664 aa14.81□□□□□ -0.04
TFF3-202ENST00000398431 FRAT1Q92837 279 aaPredicted RBP14.81□□□□□ -0.04
TFF3-202ENST00000398431 DBNDD2Q9BQY9 259 aa14.81□□□□□ -0.04
TFF3-202ENST00000398431 DNAJC18Q9H819 358 aa14.81□□□□□ -0.04
TFF3-202ENST00000398431 GPR108Q9NPR9 543 aa14.81□□□□□ -0.04
TFF3-202ENST00000398431 AATFQ9NY61 560 aaKnown RBP eCLIP14.81□□□□□ -0.04
TFF3-202ENST00000398431 MYO5AQ9Y4I1 1855 aaKnown RBP14.8□□□□□ -0.04
TFF3-202ENST00000398431 PEX10O60683 326 aa14.8□□□□□ -0.04
TFF3-202ENST00000398431 TRIM32Q13049 653 aa14.8□□□□□ -0.04
TFF3-202ENST00000398431 TNNI3KQ59H18 835 aa14.8□□□□□ -0.04
TFF3-202ENST00000398431 NAA16Q6N069 864 aaPredicted RBP14.8□□□□□ -0.04
TFF3-202ENST00000398431 FOXP4Q8IVH2 680 aaPredicted RBP14.8□□□□□ -0.04
TFF3-202ENST00000398431 SSH3Q8TE77 659 aa14.8□□□□□ -0.04
TFF3-202ENST00000398431 TGFBRAP1Q8WUH2 860 aa14.8□□□□□ -0.04
TFF3-202ENST00000398431 PAWRQ96IZ0 340 aaKnown RBP14.8□□□□□ -0.04
TFF3-202ENST00000398431 P2RX7Q99572 595 aaKnown RBP14.8□□□□□ -0.04
TFF3-202ENST00000398431 DHX36Q9H2U1 1008 aaKnown RBP14.8□□□□□ -0.04
TFF3-202ENST00000398431 MORF4L1Q9UBU8 362 aa14.8□□□□□ -0.04
TFF3-202ENST00000398431 TAOK2Q9UL54 1235 aa14.8□□□□□ -0.04
TFF3-202ENST00000398431 NR2E3Q9Y5X4 410 aa14.8□□□□□ -0.04
TFF3-202ENST00000398431 FPGT-TNNI3KV9GXZ4 949 aa14.8□□□□□ -0.04
TFF3-202ENST00000398431 PLXNB2O15031 1838 aa14.79□□□□□ -0.04
TFF3-202ENST00000398431 HOXA7P31268 230 aaPredicted RBP14.79□□□□□ -0.04
TFF3-202ENST00000398431 MNX1P50219 401 aaPredicted RBP14.79□□□□□ -0.04
TFF3-202ENST00000398431 BACE1P56817 501 aa14.79□□□□□ -0.04
TFF3-202ENST00000398431 POTEEQ6S8J3 1075 aa14.79□□□□□ -0.04
TFF3-202ENST00000398431 DIS3LQ8TF46 1054 aaKnown RBP14.79□□□□□ -0.04
TFF3-202ENST00000398431 ZNF512BQ96KM6 892 aaPredicted RBP14.79□□□□□ -0.04
TFF3-202ENST00000398431 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.79□□□□□ -0.04
TFF3-202ENST00000398431 ALPK3Q96L96 1907 aa14.78□□□□□ -0.04
TFF3-202ENST00000398431 CDK5RAP2Q96SN8 1893 aa14.78□□□□□ -0.04
TFF3-202ENST00000398431 BAG3O95817 575 aa14.78□□□□□ -0.04
TFF3-202ENST00000398431 PABPC4Q13310 644 aaKnown RBP eCLIP14.78□□□□□ -0.04
TFF3-202ENST00000398431 TTC39AQ5SRH9 613 aa14.78□□□□□ -0.04
TFF3-202ENST00000398431 MAPKAPK5Q8IW41 473 aa14.78□□□□□ -0.04
TFF3-202ENST00000398431 AS3MTQ9HBK9 375 aa14.78□□□□□ -0.04
TFF3-202ENST00000398431 TXNRD2Q9NNW7 524 aa14.78□□□□□ -0.04
TFF3-202ENST00000398431 PIH1D3Q9NQM4 214 aaKnown RBP14.78□□□□□ -0.04
TFF3-202ENST00000398431 PALD1Q9ULE6 856 aa14.78□□□□□ -0.04
TFF3-202ENST00000398431 SZT2Q5T011 3432 aa14.77□□□□□ -0.04
TFF3-202ENST00000398431 FLT1P17948 1338 aa14.77□□□□□ -0.04
TFF3-202ENST00000398431 RPTORQ8N122 1335 aa14.77□□□□□ -0.04
TFF3-202ENST00000398431 EVI5O60447 810 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms