RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 KCNH4Q9UQ05 1017 aa20.26■□□□□ 0.83
APTR-201ENST00000398043 CTNND1O60716 968 aaKnown RBP20.25■□□□□ 0.83
APTR-201ENST00000398043 ALDH1A1P00352 501 aa20.25■□□□□ 0.83
APTR-201ENST00000398043 CHGBP05060 677 aa20.25■□□□□ 0.83
APTR-201ENST00000398043 TSHZ3Q63HK5 1081 aa20.25■□□□□ 0.83
APTR-201ENST00000398043 PI4K2BQ8TCG2 481 aa20.25■□□□□ 0.83
APTR-201ENST00000398043 DNAJC18Q9H819 358 aa20.25■□□□□ 0.83
APTR-201ENST00000398043 PALD1Q9ULE6 856 aa20.25■□□□□ 0.83
APTR-201ENST00000398043 MAGEB6P1A0A0J9YX57 407 aa20.24■□□□□ 0.83
APTR-201ENST00000398043 PTPRAP18433 802 aa20.24■□□□□ 0.83
APTR-201ENST00000398043 MOGSQ13724 837 aa20.24■□□□□ 0.83
APTR-201ENST00000398043 SMC5Q8IY18 1101 aa20.24■□□□□ 0.83
APTR-201ENST00000398043 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.24■□□□□ 0.83
APTR-201ENST00000398043 HERC5Q9UII4 1024 aaKnown RBP20.24■□□□□ 0.83
APTR-201ENST00000398043 TTC41PQ6P2S7 1318 aa20.24■□□□□ 0.83
APTR-201ENST00000398043 CCL15-CCL14A0A0B4J2E2 113 aa20.23■□□□□ 0.83
APTR-201ENST00000398043 CCL15Q16663 113 aa20.23■□□□□ 0.83
APTR-201ENST00000398043 IFFO2Q5TF58 517 aa20.23■□□□□ 0.83
APTR-201ENST00000398043 GPATCH3Q96I76 525 aa20.23■□□□□ 0.83
APTR-201ENST00000398043 LOC285556D6RIA3 1793 aa20.23■□□□□ 0.83
APTR-201ENST00000398043 IGHDP01880 384 aa20.22■□□□□ 0.83
APTR-201ENST00000398043 CETPP11597 493 aa20.22■□□□□ 0.83
APTR-201ENST00000398043 SNAPC2Q13487 334 aa20.22■□□□□ 0.83
APTR-201ENST00000398043 UBE3CQ15386 1083 aa20.22■□□□□ 0.83
APTR-201ENST00000398043 FOXP4Q8IVH2 680 aaPredicted RBP20.22■□□□□ 0.83
APTR-201ENST00000398043 FAM43AQ8N2R8 423 aa20.22■□□□□ 0.83
APTR-201ENST00000398043 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.22■□□□□ 0.83
APTR-201ENST00000398043 SAP30BPQ9UHR5 308 aaKnown RBP20.22■□□□□ 0.83
APTR-201ENST00000398043 BTBD19C9JJ37 291 aa20.21■□□□□ 0.83
APTR-201ENST00000398043 GPR25O00155 361 aa20.21■□□□□ 0.83
APTR-201ENST00000398043 CAP2P40123 477 aa20.21■□□□□ 0.83
APTR-201ENST00000398043 ANKRD45Q5TZF3 282 aa20.21■□□□□ 0.83
APTR-201ENST00000398043 LCORLQ8N3X6 602 aa20.21■□□□□ 0.83
APTR-201ENST00000398043 KBTBD3Q8NAB2 608 aa20.21■□□□□ 0.83
APTR-201ENST00000398043 ZNF296Q8WUU4 475 aaPredicted RBP20.21■□□□□ 0.83
APTR-201ENST00000398043 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.21■□□□□ 0.83
APTR-201ENST00000398043 AFG3L2Q9Y4W6 797 aa20.21■□□□□ 0.83
APTR-201ENST00000398043 CXCL11O14625 94 aa20.2■□□□□ 0.82
APTR-201ENST00000398043 MX1P20591 662 aa20.2■□□□□ 0.82
APTR-201ENST00000398043 USP5P45974 858 aa20.2■□□□□ 0.82
APTR-201ENST00000398043 CRHR2Q13324 411 aa20.2■□□□□ 0.82
APTR-201ENST00000398043 OTUD7BQ6GQQ9 843 aa20.2■□□□□ 0.82
APTR-201ENST00000398043 ZCCHC17Q9NP64 241 aaKnown RBP20.2■□□□□ 0.82
APTR-201ENST00000398043 STAP2Q9UGK3 403 aa20.2■□□□□ 0.82
APTR-201ENST00000398043 JAG1P78504 1218 aa20.19■□□□□ 0.82
APTR-201ENST00000398043 CRNKL1Q9BZJ0 848 aaKnown RBP20.19■□□□□ 0.82
APTR-201ENST00000398043 EHD4Q9H223 541 aa20.19■□□□□ 0.82
APTR-201ENST00000398043 RWDD1Q9H446 243 aaPredicted RBP20.19■□□□□ 0.82
APTR-201ENST00000398043 ARMT1Q9H993 441 aa20.19■□□□□ 0.82
APTR-201ENST00000398043 PICK1Q9NRD5 415 aa20.19■□□□□ 0.82
APTR-201ENST00000398043 ZHX2Q9Y6X8 837 aa20.19■□□□□ 0.82
APTR-201ENST00000398043 GLRX3O76003 335 aaKnown RBP20.18■□□□□ 0.82
APTR-201ENST00000398043 CCDC84Q86UT8 332 aaPredicted RBP20.18■□□□□ 0.82
APTR-201ENST00000398043 SDR42E1Q8WUS8 393 aa20.18■□□□□ 0.82
APTR-201ENST00000398043 PUS7LQ9H0K6 701 aaKnown RBP20.18■□□□□ 0.82
APTR-201ENST00000398043 DCP1AQ9NPI6 582 aaPredicted RBP20.18■□□□□ 0.82
APTR-201ENST00000398043 ZSWIM8A7E2V4 1837 aa20.18■□□□□ 0.82
APTR-201ENST00000398043 A0A0G2JLL6 359 aaPredicted RBP20.17■□□□□ 0.82
APTR-201ENST00000398043 ERC2O15083 957 aa20.17■□□□□ 0.82
APTR-201ENST00000398043 MBD4O95243 580 aa20.17■□□□□ 0.82
APTR-201ENST00000398043 HLA-DOAP06340 250 aa20.17■□□□□ 0.82
APTR-201ENST00000398043 PLCD1P51178 756 aa20.17■□□□□ 0.82
APTR-201ENST00000398043 ZSCAN25Q6NSZ9 544 aa20.17■□□□□ 0.82
APTR-201ENST00000398043 GPAT2Q6NUI2 795 aa20.17■□□□□ 0.82
APTR-201ENST00000398043 PRRT2Q7Z6L0 340 aaPredicted RBP20.17■□□□□ 0.82
APTR-201ENST00000398043 ANKRD23Q86SG2 305 aa20.17■□□□□ 0.82
APTR-201ENST00000398043 MGAMO43451 1857 aa20.17■□□□□ 0.82
APTR-201ENST00000398043 PRKAB2O43741 272 aa20.16■□□□□ 0.82
APTR-201ENST00000398043 FKTNO75072 461 aa20.16■□□□□ 0.82
APTR-201ENST00000398043 EVX2Q03828 476 aa20.16■□□□□ 0.82
APTR-201ENST00000398043 GABPAQ06546 454 aa20.16■□□□□ 0.82
APTR-201ENST00000398043 SHROOM1Q2M3G4 852 aaPredicted RBP20.16■□□□□ 0.82
APTR-201ENST00000398043 SLC4A8Q2Y0W8 1093 aa20.16■□□□□ 0.82
APTR-201ENST00000398043 TATDN1Q6P1N9 297 aa20.16■□□□□ 0.82
APTR-201ENST00000398043 MCOLN1Q9GZU1 580 aa20.16■□□□□ 0.82
APTR-201ENST00000398043 DOCK3Q8IZD9 2030 aa20.15■□□□□ 0.82
APTR-201ENST00000398043 PDE1AP54750 535 aa20.15■□□□□ 0.82
APTR-201ENST00000398043 TAF1CQ15572 869 aaPredicted RBP20.15■□□□□ 0.82
APTR-201ENST00000398043 TTC6Q86TZ1 520 aa20.15■□□□□ 0.82
APTR-201ENST00000398043 OSBP2Q969R2 916 aa20.15■□□□□ 0.82
APTR-201ENST00000398043 SERPINB13Q9UIV8 391 aa20.15■□□□□ 0.82
APTR-201ENST00000398043 ADGRA2Q96PE1 1338 aa20.15■□□□□ 0.82
APTR-201ENST00000398043 RNF113AO15541 343 aaKnown RBP20.14■□□□□ 0.81
APTR-201ENST00000398043 IRX6P78412 446 aaPredicted RBP20.14■□□□□ 0.81
APTR-201ENST00000398043 CAP1Q01518 475 aa20.14■□□□□ 0.81
APTR-201ENST00000398043 NUCB1Q02818 461 aa20.14■□□□□ 0.81
APTR-201ENST00000398043 DGKZQ13574 1117 aa20.14■□□□□ 0.81
APTR-201ENST00000398043 CTU1Q7Z7A3 348 aaKnown RBP20.14■□□□□ 0.81
APTR-201ENST00000398043 CRACR2BQ8N4Y2 399 aaPredicted RBP20.14■□□□□ 0.81
APTR-201ENST00000398043 APPBP2Q92624 585 aa20.14■□□□□ 0.81
APTR-201ENST00000398043 ATP8A2Q9NTI2 1148 aa20.14■□□□□ 0.81
APTR-201ENST00000398043 GINM1Q9NU53 330 aa20.14■□□□□ 0.81
APTR-201ENST00000398043 USP17L5A8MUK1 530 aa20.13■□□□□ 0.81
APTR-201ENST00000398043 ZFYP08048 801 aaPredicted RBP20.13■□□□□ 0.81
APTR-201ENST00000398043 ASNSP08243 561 aa20.13■□□□□ 0.81
APTR-201ENST00000398043 SHMT1P34896 483 aa20.13■□□□□ 0.81
APTR-201ENST00000398043 ABHD8Q96I13 439 aa20.13■□□□□ 0.81
APTR-201ENST00000398043 STRBPQ96SI9 672 aaKnown RBP20.13■□□□□ 0.81
APTR-201ENST00000398043 WDR18Q9BV38 432 aa20.13■□□□□ 0.81
APTR-201ENST00000398043 TBC1D2Q9BYX2 928 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms