RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 OGFOD1Q8N543 542 aa20.13■□□□□ 0.81
TSPAN4-205ENST00000397406 TGFBRAP1Q8WUH2 860 aa20.13■□□□□ 0.81
TSPAN4-205ENST00000397406 NBPF3Q9H094 633 aa20.13■□□□□ 0.81
TSPAN4-205ENST00000397406 USP40Q9NVE5 1235 aa20.13■□□□□ 0.81
TSPAN4-205ENST00000397406 ZNF213O14771 459 aa20.12■□□□□ 0.81
TSPAN4-205ENST00000397406 MMP14P50281 582 aa20.12■□□□□ 0.81
TSPAN4-205ENST00000397406 RBM5P52756 815 aaKnown RBP eCLIP20.12■□□□□ 0.81
TSPAN4-205ENST00000397406 HAND2P61296 217 aa20.12■□□□□ 0.81
TSPAN4-205ENST00000397406 STOX1Q6ZVD7 989 aa20.12■□□□□ 0.81
TSPAN4-205ENST00000397406 MTMR14Q8NCE2 650 aa20.12■□□□□ 0.81
TSPAN4-205ENST00000397406 TM6SF1Q9BZW5 370 aa20.12■□□□□ 0.81
TSPAN4-205ENST00000397406 WDHD1O75717 1129 aaPredicted RBP20.11■□□□□ 0.81
TSPAN4-205ENST00000397406 ANP32AP39687 249 aaKnown RBP20.11■□□□□ 0.81
TSPAN4-205ENST00000397406 KRT32Q14532 448 aa20.11■□□□□ 0.81
TSPAN4-205ENST00000397406 SBK1Q52WX2 424 aa20.11■□□□□ 0.81
TSPAN4-205ENST00000397406 CTR9Q6PD62 1173 aa20.11■□□□□ 0.81
TSPAN4-205ENST00000397406 FLT1P17948 1338 aa20.11■□□□□ 0.81
TSPAN4-205ENST00000397406 SPDYE2BA6NHP3 402 aa20.1■□□□□ 0.81
TSPAN4-205ENST00000397406 E7EWF7 191 aa20.1■□□□□ 0.81
TSPAN4-205ENST00000397406 SPDYE6P0CI01 402 aa20.1■□□□□ 0.81
TSPAN4-205ENST00000397406 MAPKAPK5Q8IW41 473 aa20.1■□□□□ 0.81
TSPAN4-205ENST00000397406 DDRGK1Q96HY6 314 aa20.1■□□□□ 0.81
TSPAN4-205ENST00000397406 PRMT6Q96LA8 375 aaPredicted RBP20.1■□□□□ 0.81
TSPAN4-205ENST00000397406 JAKMIP1Q96N16 626 aaKnown RBP20.1■□□□□ 0.81
TSPAN4-205ENST00000397406 ANAPC4Q9UJX5 808 aa20.1■□□□□ 0.81
TSPAN4-205ENST00000397406 USP17L12C9JPN9 530 aa20.1■□□□□ 0.81
TSPAN4-205ENST00000397406 USP17L21D6R901 530 aa20.1■□□□□ 0.81
TSPAN4-205ENST00000397406 SLC10A3P09131 477 aa20.1■□□□□ 0.81
TSPAN4-205ENST00000397406 NOGQ13253 232 aa20.1■□□□□ 0.81
TSPAN4-205ENST00000397406 COL9A3Q14050 684 aaPredicted RBP20.1■□□□□ 0.81
TSPAN4-205ENST00000397406 DLGAP5Q15398 846 aa20.1■□□□□ 0.81
TSPAN4-205ENST00000397406 TBC1D10CQ8IV04 446 aa20.1■□□□□ 0.81
TSPAN4-205ENST00000397406 ZSWIM6Q9HCJ5 1215 aa20.1■□□□□ 0.81
TSPAN4-205ENST00000397406 DDX4Q9NQI0 724 aaKnown RBP20.1■□□□□ 0.81
TSPAN4-205ENST00000397406 ARPP21Q9UBL0 812 aaPredicted RBP20.1■□□□□ 0.81
TSPAN4-205ENST00000397406 UBE2Q2LH0YL09 131 aa20.09■□□□□ 0.81
TSPAN4-205ENST00000397406 CASTP20810 708 aaKnown RBP20.09■□□□□ 0.81
TSPAN4-205ENST00000397406 ZNF157P51786 506 aaPredicted RBP20.09■□□□□ 0.81
TSPAN4-205ENST00000397406 KIF23Q02241 960 aaPredicted RBP20.09■□□□□ 0.81
TSPAN4-205ENST00000397406 PPARAQ07869 468 aa20.09■□□□□ 0.81
TSPAN4-205ENST00000397406 RASAL3Q86YV0 1011 aa20.09■□□□□ 0.81
TSPAN4-205ENST00000397406 UPF3BQ9BZI7 483 aaKnown RBP20.09■□□□□ 0.81
TSPAN4-205ENST00000397406 FZD1Q9UP38 647 aa20.09■□□□□ 0.81
TSPAN4-205ENST00000397406 SIPA1L1O43166 1804 aa20.08■□□□□ 0.81
TSPAN4-205ENST00000397406 CYP2D7A0A087X1C5 515 aa20.08■□□□□ 0.8
TSPAN4-205ENST00000397406 MINDY4BA8MYZ0 360 aa20.08■□□□□ 0.8
TSPAN4-205ENST00000397406 CAPN15O75808 1086 aa20.08■□□□□ 0.8
TSPAN4-205ENST00000397406 PSMA5P28066 241 aa20.08■□□□□ 0.8
TSPAN4-205ENST00000397406 CTDSPL2Q05D32 466 aa20.08■□□□□ 0.8
TSPAN4-205ENST00000397406 IDI2Q9BXS1 227 aa20.08■□□□□ 0.8
TSPAN4-205ENST00000397406 TDRD3Q9H7E2 651 aaKnown RBP20.08■□□□□ 0.8
TSPAN4-205ENST00000397406 MCM9Q9NXL9 1143 aa20.08■□□□□ 0.8
TSPAN4-205ENST00000397406 TACC3Q9Y6A5 838 aa20.08■□□□□ 0.8
TSPAN4-205ENST00000397406 PAPPA2Q9BXP8 1791 aa20.07■□□□□ 0.8
TSPAN4-205ENST00000397406 SSC5DA1L4H1 1573 aa20.07■□□□□ 0.8
TSPAN4-205ENST00000397406 SMIM22K7EJ46 135 aa20.07■□□□□ 0.8
TSPAN4-205ENST00000397406 CYP2D6P10635 497 aa20.07■□□□□ 0.8
TSPAN4-205ENST00000397406 CPA1P15085 419 aa20.07■□□□□ 0.8
TSPAN4-205ENST00000397406 NEK4P51957 841 aa20.07■□□□□ 0.8
TSPAN4-205ENST00000397406 EVX2Q03828 476 aa20.07■□□□□ 0.8
TSPAN4-205ENST00000397406 NFIAQ12857 509 aa20.07■□□□□ 0.8
TSPAN4-205ENST00000397406 C12orf60Q5U649 245 aa20.07■□□□□ 0.8
TSPAN4-205ENST00000397406 STAG1Q8WVM7 1258 aa20.07■□□□□ 0.8
TSPAN4-205ENST00000397406 NEK1Q96PY6 1258 aa20.07■□□□□ 0.8
TSPAN4-205ENST00000397406 ROBO3Q96MS0 1386 aa20.06■□□□□ 0.8
TSPAN4-205ENST00000397406 MYH8P13535 1937 aa20.06■□□□□ 0.8
TSPAN4-205ENST00000397406 CLRN2A0PK11 232 aa20.06■□□□□ 0.8
TSPAN4-205ENST00000397406 NPM3O75607 178 aaKnown RBP20.06■□□□□ 0.8
TSPAN4-205ENST00000397406 FKBP1BP68106 108 aa20.06■□□□□ 0.8
TSPAN4-205ENST00000397406 PICALMQ13492 652 aa20.06■□□□□ 0.8
TSPAN4-205ENST00000397406 AKNAD1Q5T1N1 836 aa20.06■□□□□ 0.8
TSPAN4-205ENST00000397406 RUFY3Q7L099 469 aa20.06■□□□□ 0.8
TSPAN4-205ENST00000397406 IL27Q8NEV9 243 aa20.06■□□□□ 0.8
TSPAN4-205ENST00000397406 CCDC102AQ96A19 550 aa20.06■□□□□ 0.8
TSPAN4-205ENST00000397406 CSRNP1Q96S65 589 aa20.06■□□□□ 0.8
TSPAN4-205ENST00000397406 OSBPL5Q9H0X9 879 aaPredicted RBP20.06■□□□□ 0.8
TSPAN4-205ENST00000397406 FAM198AQ9UFP1 575 aa20.06■□□□□ 0.8
TSPAN4-205ENST00000397406 SAP30BPQ9UHR5 308 aaKnown RBP20.06■□□□□ 0.8
TSPAN4-205ENST00000397406 NEDD4P46934 1319 aa20.05■□□□□ 0.8
TSPAN4-205ENST00000397406 CD2BP2O95400 341 aaKnown RBP20.05■□□□□ 0.8
TSPAN4-205ENST00000397406 CACNB3P54284 484 aa20.05■□□□□ 0.8
TSPAN4-205ENST00000397406 SPDYE2Q495Y8 402 aa20.05■□□□□ 0.8
TSPAN4-205ENST00000397406 BLOC1S2Q6QNY1 142 aa20.05■□□□□ 0.8
TSPAN4-205ENST00000397406 SNX21Q969T3 373 aa20.05■□□□□ 0.8
TSPAN4-205ENST00000397406 TTC14Q96N46 770 aa20.05■□□□□ 0.8
TSPAN4-205ENST00000397406 ZNF70Q9UC06 446 aaPredicted RBP20.05■□□□□ 0.8
TSPAN4-205ENST00000397406 CYP46A1Q9Y6A2 500 aa20.05■□□□□ 0.8
TSPAN4-205ENST00000397406 RPS6KB1P23443 525 aa20.04■□□□□ 0.8
TSPAN4-205ENST00000397406 APOBEC3FQ8IUX4 373 aaKnown RBP20.04■□□□□ 0.8
TSPAN4-205ENST00000397406 DEFB129Q9H1M3 183 aa20.04■□□□□ 0.8
TSPAN4-205ENST00000397406 INCENPQ9NQS7 918 aa20.04■□□□□ 0.8
TSPAN4-205ENST00000397406 COL2A1P02458 1487 aaPredicted RBP20.04■□□□□ 0.8
TSPAN4-205ENST00000397406 ST18O60284 1047 aa20.03■□□□□ 0.8
TSPAN4-205ENST00000397406 POLR3DP05423 398 aaPredicted RBP20.03■□□□□ 0.8
TSPAN4-205ENST00000397406 HMGB1P09429 215 aaKnown RBP20.03■□□□□ 0.8
TSPAN4-205ENST00000397406 FGRP09769 529 aa20.03■□□□□ 0.8
TSPAN4-205ENST00000397406 PLCD1P51178 756 aa20.03■□□□□ 0.8
TSPAN4-205ENST00000397406 AMOTL1Q8IY63 956 aa20.03■□□□□ 0.8
TSPAN4-205ENST00000397406 MB21D2Q8IYB1 491 aaPredicted RBP20.03■□□□□ 0.8
TSPAN4-205ENST00000397406 NCOA7Q8NI08 942 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms