RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 CTU1Q7Z7A3 348 aaKnown RBP17.63■□□□□ 0.41
SEC13-208ENST00000397109 MCOLN1Q9GZU1 580 aa17.63■□□□□ 0.41
SEC13-208ENST00000397109 R3HDMLQ9H3Y0 253 aa17.63■□□□□ 0.41
SEC13-208ENST00000397109 MAGEB6P1A0A0J9YX57 407 aa17.62■□□□□ 0.41
SEC13-208ENST00000397109 HLA-DOAP06340 250 aa17.62■□□□□ 0.41
SEC13-208ENST00000397109 PTPRAP18433 802 aa17.62■□□□□ 0.41
SEC13-208ENST00000397109 CRHR2Q13324 411 aa17.62■□□□□ 0.41
SEC13-208ENST00000397109 EDC3Q96F86 508 aaKnown RBP17.62■□□□□ 0.41
SEC13-208ENST00000397109 ABHD8Q96I13 439 aa17.62■□□□□ 0.41
SEC13-208ENST00000397109 ZFYVE28Q9HCC9 887 aa17.62■□□□□ 0.41
SEC13-208ENST00000397109 ZBTB47Q9UFB7 747 aaPredicted RBP17.62■□□□□ 0.41
SEC13-208ENST00000397109 ZHX2Q9Y6X8 837 aa17.62■□□□□ 0.41
SEC13-208ENST00000397109 CDK5RAP2Q96SN8 1893 aa17.61■□□□□ 0.41
SEC13-208ENST00000397109 FOCADQ5VW36 1801 aa17.61■□□□□ 0.41
SEC13-208ENST00000397109 ZNF532Q9HCE3 1301 aa17.61■□□□□ 0.41
SEC13-208ENST00000397109 HDAC1Q13547 482 aaPredicted RBP17.61■□□□□ 0.41
SEC13-208ENST00000397109 TAF1CQ15572 869 aaPredicted RBP17.61■□□□□ 0.41
SEC13-208ENST00000397109 METTL16Q86W50 562 aaKnown RBP17.61■□□□□ 0.41
SEC13-208ENST00000397109 CCDC136Q96JN2 1154 aa17.61■□□□□ 0.41
SEC13-208ENST00000397109 RIOK1Q9BRS2 568 aaKnown RBP17.61■□□□□ 0.41
SEC13-208ENST00000397109 TRIM34Q9BYJ4 488 aa17.61■□□□□ 0.41
SEC13-208ENST00000397109 TCRBV5S4A2TA0A5A2 114 aa17.6■□□□□ 0.41
SEC13-208ENST00000397109 BTBD19C9JJ37 291 aa17.6■□□□□ 0.41
SEC13-208ENST00000397109 SLURP2P0DP57 97 aa17.6■□□□□ 0.41
SEC13-208ENST00000397109 ADD2P35612 726 aa17.6■□□□□ 0.41
SEC13-208ENST00000397109 PKN2Q16513 984 aaKnown RBP17.6■□□□□ 0.41
SEC13-208ENST00000397109 ZSCAN25Q6NSZ9 544 aa17.6■□□□□ 0.41
SEC13-208ENST00000397109 FAM43AQ8N2R8 423 aa17.6■□□□□ 0.41
SEC13-208ENST00000397109 CRACR2BQ8N4Y2 399 aaPredicted RBP17.6■□□□□ 0.41
SEC13-208ENST00000397109 GCC1Q96CN9 775 aa17.6■□□□□ 0.41
SEC13-208ENST00000397109 TBC1D2Q9BYX2 928 aa17.6■□□□□ 0.41
SEC13-208ENST00000397109 CRNKL1Q9BZJ0 848 aaKnown RBP17.6■□□□□ 0.41
SEC13-208ENST00000397109 PALD1Q9ULE6 856 aa17.6■□□□□ 0.41
SEC13-208ENST00000397109 FAM196BA6NMK8 535 aa17.59■□□□□ 0.41
SEC13-208ENST00000397109 CAP2P40123 477 aa17.59■□□□□ 0.41
SEC13-208ENST00000397109 ANKRD23Q86SG2 305 aa17.59■□□□□ 0.41
SEC13-208ENST00000397109 TTC6Q86TZ1 520 aa17.59■□□□□ 0.41
SEC13-208ENST00000397109 SAP30BPQ9UHR5 308 aaKnown RBP17.59■□□□□ 0.41
SEC13-208ENST00000397109 AFG3L2Q9Y4W6 797 aa17.59■□□□□ 0.41
SEC13-208ENST00000397109 DOCK1Q14185 1865 aa17.59■□□□□ 0.41
SEC13-208ENST00000397109 TTC41PQ6P2S7 1318 aa17.58■□□□□ 0.41
SEC13-208ENST00000397109 ERC2O15083 957 aa17.58■□□□□ 0.41
SEC13-208ENST00000397109 CAPN15O75808 1086 aa17.58■□□□□ 0.41
SEC13-208ENST00000397109 UBE3CQ15386 1083 aa17.58■□□□□ 0.41
SEC13-208ENST00000397109 FASTKD5Q7L8L6 764 aaKnown RBP17.58■□□□□ 0.41
SEC13-208ENST00000397109 ERO1AQ96HE7 468 aa17.58■□□□□ 0.41
SEC13-208ENST00000397109 GINM1Q9NU53 330 aa17.58■□□□□ 0.41
SEC13-208ENST00000397109 MYH1P12882 1939 aa17.58■□□□□ 0.4
SEC13-208ENST00000397109 SP3Q02447 781 aa17.57■□□□□ 0.4
SEC13-208ENST00000397109 A0A0G2JLL6 359 aaPredicted RBP17.56■□□□□ 0.4
SEC13-208ENST00000397109 ASNSP08243 561 aa17.56■□□□□ 0.4
SEC13-208ENST00000397109 ANKRD45Q5TZF3 282 aa17.56■□□□□ 0.4
SEC13-208ENST00000397109 PRRT2Q7Z6L0 340 aaPredicted RBP17.56■□□□□ 0.4
SEC13-208ENST00000397109 EHD4Q9H223 541 aa17.56■□□□□ 0.4
SEC13-208ENST00000397109 USP17L5A8MUK1 530 aa17.56■□□□□ 0.4
SEC13-208ENST00000397109 PDHXO00330 501 aa17.56■□□□□ 0.4
SEC13-208ENST00000397109 TLR2O60603 784 aa17.56■□□□□ 0.4
SEC13-208ENST00000397109 GLRX3O76003 335 aaKnown RBP17.56■□□□□ 0.4
SEC13-208ENST00000397109 MOGSQ13724 837 aa17.56■□□□□ 0.4
SEC13-208ENST00000397109 ARHGEF6Q15052 776 aa17.56■□□□□ 0.4
SEC13-208ENST00000397109 LRRFIP1Q32MZ4 808 aaKnown RBP17.56■□□□□ 0.4
SEC13-208ENST00000397109 B4GALNT3Q6L9W6 998 aa17.56■□□□□ 0.4
SEC13-208ENST00000397109 KBTBD3Q8NAB2 608 aa17.56■□□□□ 0.4
SEC13-208ENST00000397109 RWDD1Q9H446 243 aaPredicted RBP17.56■□□□□ 0.4
SEC13-208ENST00000397109 AS3MTQ9HBK9 375 aa17.56■□□□□ 0.4
SEC13-208ENST00000397109 SERPINB13Q9UIV8 391 aa17.56■□□□□ 0.4
SEC13-208ENST00000397109 MYH7P12883 1935 aa17.55■□□□□ 0.4
SEC13-208ENST00000397109 POLR3DP05423 398 aaPredicted RBP17.55■□□□□ 0.4
SEC13-208ENST00000397109 RRP1BQ14684 758 aaKnown RBP17.55■□□□□ 0.4
SEC13-208ENST00000397109 LCORLQ8N3X6 602 aa17.55■□□□□ 0.4
SEC13-208ENST00000397109 ZNF280CQ8ND82 737 aa17.55■□□□□ 0.4
SEC13-208ENST00000397109 DNAJC18Q9H819 358 aa17.55■□□□□ 0.4
SEC13-208ENST00000397109 SIPA1L1O43166 1804 aa17.54■□□□□ 0.4
SEC13-208ENST00000397109 TRIM75PA6NK02 468 aa17.54■□□□□ 0.4
SEC13-208ENST00000397109 MBD4O95243 580 aa17.54■□□□□ 0.4
SEC13-208ENST00000397109 GPAT2Q6NUI2 795 aa17.54■□□□□ 0.4
SEC13-208ENST00000397109 GADL1Q6ZQY3 521 aa17.54■□□□□ 0.4
SEC13-208ENST00000397109 ARMT1Q9H993 441 aa17.54■□□□□ 0.4
SEC13-208ENST00000397109 ATP8A2Q9NTI2 1148 aa17.54■□□□□ 0.4
SEC13-208ENST00000397109 SLC45A1Q9Y2W3 748 aa17.54■□□□□ 0.4
SEC13-208ENST00000397109 PHIPQ8WWQ0 1821 aa17.53■□□□□ 0.4
SEC13-208ENST00000397109 ZFYP08048 801 aaPredicted RBP17.53■□□□□ 0.4
SEC13-208ENST00000397109 MX1P20591 662 aa17.53■□□□□ 0.4
SEC13-208ENST00000397109 SPP2Q13103 211 aa17.53■□□□□ 0.4
SEC13-208ENST00000397109 SLC4A8Q2Y0W8 1093 aa17.53■□□□□ 0.4
SEC13-208ENST00000397109 TSHZ3Q63HK5 1081 aa17.53■□□□□ 0.4
SEC13-208ENST00000397109 FBXO46Q6PJ61 603 aaPredicted RBP17.53■□□□□ 0.4
SEC13-208ENST00000397109 DDRGK1Q96HY6 314 aa17.53■□□□□ 0.4
SEC13-208ENST00000397109 PARK7Q99497 189 aaKnown RBP17.53■□□□□ 0.4
SEC13-208ENST00000397109 WDR18Q9BV38 432 aa17.53■□□□□ 0.4
SEC13-208ENST00000397109 DCP1AQ9NPI6 582 aaPredicted RBP17.53■□□□□ 0.4
SEC13-208ENST00000397109 MCM9Q9NXL9 1143 aa17.53■□□□□ 0.4
SEC13-208ENST00000397109 TAOK2Q9UL54 1235 aa17.53■□□□□ 0.4
SEC13-208ENST00000397109 ATAD5Q96QE3 1844 aa17.53■□□□□ 0.4
SEC13-208ENST00000397109 CCDC85CA6NKD9 419 aa17.52■□□□□ 0.4
SEC13-208ENST00000397109 SLFNL1Q499Z3 407 aa17.52■□□□□ 0.4
SEC13-208ENST00000397109 TATDN1Q6P1N9 297 aa17.52■□□□□ 0.4
SEC13-208ENST00000397109 CCDC84Q86UT8 332 aaPredicted RBP17.52■□□□□ 0.4
SEC13-208ENST00000397109 PROCA1Q8NCQ7 364 aaPredicted RBP17.52■□□□□ 0.4
SEC13-208ENST00000397109 CD99L2Q8TCZ2 262 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms