RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 SGMS1Q86VZ5 419 aa15.99■□□□□ 0.15
NUP98-204ENST00000397004 PARD6BQ9BYG5 372 aa15.99■□□□□ 0.15
NUP98-204ENST00000397004 ACTN4O43707 911 aaKnown RBP15.99■□□□□ 0.15
NUP98-204ENST00000397004 PRKAB2O43741 272 aa15.99■□□□□ 0.15
NUP98-204ENST00000397004 PDE6AP16499 860 aa15.99■□□□□ 0.15
NUP98-204ENST00000397004 TPM4P67936 248 aa15.99■□□□□ 0.15
NUP98-204ENST00000397004 RAD9BQ6WBX8 426 aa15.99■□□□□ 0.15
NUP98-204ENST00000397004 NOSTRINQ8IVI9 506 aa15.99■□□□□ 0.15
NUP98-204ENST00000397004 CCDC34Q96HJ3 373 aa15.99■□□□□ 0.15
NUP98-204ENST00000397004 ZBTB43O43298 467 aa15.98■□□□□ 0.15
NUP98-204ENST00000397004 NR1I3Q14994 352 aa15.98■□□□□ 0.15
NUP98-204ENST00000397004 PDILTQ8N807 584 aa15.98■□□□□ 0.15
NUP98-204ENST00000397004 FUT8Q9BYC5 575 aa15.98■□□□□ 0.15
NUP98-204ENST00000397004 AKAP2Q9Y2D5 859 aa15.98■□□□□ 0.15
NUP98-204ENST00000397004 COBLO75128 1261 aa15.98■□□□□ 0.15
NUP98-204ENST00000397004 APPP05067 770 aa15.98■□□□□ 0.15
NUP98-204ENST00000397004 ITGA6P23229 1130 aa15.98■□□□□ 0.15
NUP98-204ENST00000397004 IARSP41252 1262 aaKnown RBP15.98■□□□□ 0.15
NUP98-204ENST00000397004 POSTNQ15063 836 aa15.98■□□□□ 0.15
NUP98-204ENST00000397004 TOGARAM1Q9Y4F4 1720 aa15.98■□□□□ 0.15
NUP98-204ENST00000397004 GPTP24298 496 aa15.98■□□□□ 0.15
NUP98-204ENST00000397004 SPATA20Q8TB22 786 aa15.98■□□□□ 0.15
NUP98-204ENST00000397004 H3BQF6 201 aa15.97■□□□□ 0.15
NUP98-204ENST00000397004 PTPREP23469 700 aa15.97■□□□□ 0.15
NUP98-204ENST00000397004 NOM1Q5C9Z4 860 aaKnown RBP15.97■□□□□ 0.15
NUP98-204ENST00000397004 TMCO3Q6UWJ1 677 aa15.97■□□□□ 0.15
NUP98-204ENST00000397004 KRI1Q8N9T8 703 aaKnown RBP15.97■□□□□ 0.15
NUP98-204ENST00000397004 HELBQ8NG08 1087 aaPredicted RBP15.97■□□□□ 0.15
NUP98-204ENST00000397004 PLA2G12BQ9BX93 195 aa15.97■□□□□ 0.15
NUP98-204ENST00000397004 GOLGA8AA7E2F4 631 aa15.97■□□□□ 0.15
NUP98-204ENST00000397004 RNF225M0QZC1 329 aaPredicted RBP15.97■□□□□ 0.15
NUP98-204ENST00000397004 MMP1P03956 469 aa15.97■□□□□ 0.15
NUP98-204ENST00000397004 PCCAP05165 728 aaPredicted RBP15.97■□□□□ 0.15
NUP98-204ENST00000397004 DPYDQ12882 1025 aa15.97■□□□□ 0.15
NUP98-204ENST00000397004 IFIT5Q13325 482 aaKnown RBP15.97■□□□□ 0.15
NUP98-204ENST00000397004 METTL24Q5JXM2 366 aa15.97■□□□□ 0.15
NUP98-204ENST00000397004 SPECC1LQ69YQ0 1117 aa15.97■□□□□ 0.15
NUP98-204ENST00000397004 ZCRB1Q8TBF4 217 aaKnown RBP15.97■□□□□ 0.15
NUP98-204ENST00000397004 TRERF1Q96PN7 1200 aa15.97■□□□□ 0.15
NUP98-204ENST00000397004 GTF2E1P29083 439 aaPredicted RBP15.97■□□□□ 0.15
NUP98-204ENST00000397004 LDHAL6AQ6ZMR3 332 aa15.97■□□□□ 0.15
NUP98-204ENST00000397004 FCHSD1Q86WN1 690 aa15.97■□□□□ 0.15
NUP98-204ENST00000397004 ZBTB38Q8NAP3 1195 aaPredicted RBP15.97■□□□□ 0.15
NUP98-204ENST00000397004 ZSWIM4Q9H7M6 989 aa15.97■□□□□ 0.15
NUP98-204ENST00000397004 SLAIN2Q9P270 581 aa15.97■□□□□ 0.15
NUP98-204ENST00000397004 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.96■□□□□ 0.15
NUP98-204ENST00000397004 SLIT2O94813 1529 aa15.96■□□□□ 0.15
NUP98-204ENST00000397004 TULP2O00295 520 aa15.96■□□□□ 0.15
NUP98-204ENST00000397004 PPP2R3AQ06190 1150 aa15.96■□□□□ 0.15
NUP98-204ENST00000397004 TMEM67Q5HYA8 995 aa15.96■□□□□ 0.15
NUP98-204ENST00000397004 DIS3L2Q8IYB7 885 aaKnown RBP15.96■□□□□ 0.15
NUP98-204ENST00000397004 MNS1Q8NEH6 495 aa15.96■□□□□ 0.15
NUP98-204ENST00000397004 CBFA2T2O43439 604 aa15.96■□□□□ 0.15
NUP98-204ENST00000397004 STX10O60499 249 aa15.96■□□□□ 0.15
NUP98-204ENST00000397004 FMNL1O95466 1100 aaPredicted RBP15.96■□□□□ 0.15
NUP98-204ENST00000397004 TUBB4AP04350 444 aa15.96■□□□□ 0.15
NUP98-204ENST00000397004 TRIM28Q13263 835 aaKnown RBP15.96■□□□□ 0.15
NUP98-204ENST00000397004 SMYD4Q8IYR2 804 aaPredicted RBP15.96■□□□□ 0.15
NUP98-204ENST00000397004 CHMP4CQ96CF2 233 aa15.96■□□□□ 0.15
NUP98-204ENST00000397004 ASAP1Q9ULH1 1129 aa15.96■□□□□ 0.15
NUP98-204ENST00000397004 TEX35Q5T0J7 233 aa15.95■□□□□ 0.14
NUP98-204ENST00000397004 DNAJC10Q8IXB1 793 aa15.95■□□□□ 0.14
NUP98-204ENST00000397004 RGS22Q8NE09 1264 aa15.95■□□□□ 0.14
NUP98-204ENST00000397004 ENOX1Q8TC92 643 aaKnown RBP15.95■□□□□ 0.14
NUP98-204ENST00000397004 MPHOSPH8Q99549 860 aa15.95■□□□□ 0.14
NUP98-204ENST00000397004 SUGCTQ9HAC7 445 aa15.95■□□□□ 0.14
NUP98-204ENST00000397004 PLEKHG2Q9H7P9 1386 aa15.95■□□□□ 0.14
NUP98-204ENST00000397004 OAS2P29728 719 aaKnown RBP15.95■□□□□ 0.14
NUP98-204ENST00000397004 TRDNQ13061 729 aa15.95■□□□□ 0.14
NUP98-204ENST00000397004 NKX1-1Q15270 411 aaPredicted RBP15.95■□□□□ 0.14
NUP98-204ENST00000397004 UBE3CQ15386 1083 aa15.95■□□□□ 0.14
NUP98-204ENST00000397004 CSRNP2Q9H175 543 aa15.95■□□□□ 0.14
NUP98-204ENST00000397004 ANKZF1Q9H8Y5 726 aa15.95■□□□□ 0.14
NUP98-204ENST00000397004 GSG1L2A8MUP6 293 aa15.95■□□□□ 0.14
NUP98-204ENST00000397004 ERVV-2B6SEH9 535 aa15.95■□□□□ 0.14
NUP98-204ENST00000397004 PBX1P40424 430 aa15.95■□□□□ 0.14
NUP98-204ENST00000397004 OLFM4Q6UX06 510 aa15.95■□□□□ 0.14
NUP98-204ENST00000397004 IFNL3Q8IZI9 196 aa15.95■□□□□ 0.14
NUP98-204ENST00000397004 EPSTI1Q96J88 318 aa15.95■□□□□ 0.14
NUP98-204ENST00000397004 PODXL2Q9NZ53 605 aa15.95■□□□□ 0.14
NUP98-204ENST00000397004 ABCC12Q96J65 1359 aa15.95■□□□□ 0.14
NUP98-204ENST00000397004 A0A1B0GTH6 734 aa15.94■□□□□ 0.14
NUP98-204ENST00000397004 ADAMTS3O15072 1205 aa15.94■□□□□ 0.14
NUP98-204ENST00000397004 CASQ1P31415 396 aa15.94■□□□□ 0.14
NUP98-204ENST00000397004 ARMT1Q9H993 441 aa15.94■□□□□ 0.14
NUP98-204ENST00000397004 FBXO3Q9UK99 471 aa15.94■□□□□ 0.14
NUP98-204ENST00000397004 GNL2Q13823 731 aaKnown RBP15.94■□□□□ 0.14
NUP98-204ENST00000397004 NFXL1Q6ZNB6 911 aa15.94■□□□□ 0.14
NUP98-204ENST00000397004 JMYQ8N9B5 988 aa15.94■□□□□ 0.14
NUP98-204ENST00000397004 SLC4A9Q96Q91 983 aa15.94■□□□□ 0.14
NUP98-204ENST00000397004 PNKPQ96T60 521 aa15.94■□□□□ 0.14
NUP98-204ENST00000397004 LTBP4Q8N2S1 1624 aa15.94■□□□□ 0.14
NUP98-204ENST00000397004 IFNAR1P17181 557 aa15.94■□□□□ 0.14
NUP98-204ENST00000397004 ATP2B1P20020 1258 aa15.94■□□□□ 0.14
NUP98-204ENST00000397004 RBL2Q08999 1139 aa15.94■□□□□ 0.14
NUP98-204ENST00000397004 TAF3Q5VWG9 929 aa15.94■□□□□ 0.14
NUP98-204ENST00000397004 NLRP10Q86W26 655 aa15.94■□□□□ 0.14
NUP98-204ENST00000397004 TMEM87BQ96K49 555 aa15.94■□□□□ 0.14
NUP98-204ENST00000397004 SRRTQ9BXP5 876 aaKnown RBP15.94■□□□□ 0.14
NUP98-204ENST00000397004 LZTFL1Q9NQ48 299 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms