RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 ORC4O43929 436 aa18.16■□□□□ 0.5
VAMP1-202ENST00000396308 KDM4AO75164 1064 aa18.16■□□□□ 0.5
VAMP1-202ENST00000396308 CYP2D6P10635 497 aa18.16■□□□□ 0.5
VAMP1-202ENST00000396308 KIF4BQ2VIQ3 1234 aa18.16■□□□□ 0.5
VAMP1-202ENST00000396308 SLC4A8Q2Y0W8 1093 aa18.16■□□□□ 0.5
VAMP1-202ENST00000396308 SPDYE2Q495Y8 402 aa18.16■□□□□ 0.5
VAMP1-202ENST00000396308 FKBP1CQ5VVH2 108 aa18.16■□□□□ 0.5
VAMP1-202ENST00000396308 Q6ZUG5 572 aa18.16■□□□□ 0.5
VAMP1-202ENST00000396308 IQCA1Q86XH1 822 aa18.16■□□□□ 0.5
VAMP1-202ENST00000396308 STK11IPQ8N1F8 1099 aa18.16■□□□□ 0.5
VAMP1-202ENST00000396308 CHMP4CQ96CF2 233 aa18.16■□□□□ 0.5
VAMP1-202ENST00000396308 PRMT6Q96LA8 375 aaPredicted RBP18.16■□□□□ 0.5
VAMP1-202ENST00000396308 MTA3Q9BTC8 594 aa18.16■□□□□ 0.5
VAMP1-202ENST00000396308 VEZTQ9HBM0 779 aa18.16■□□□□ 0.5
VAMP1-202ENST00000396308 ZNF70Q9UC06 446 aaPredicted RBP18.16■□□□□ 0.5
VAMP1-202ENST00000396308 CLRN2A0PK11 232 aa18.15■□□□□ 0.5
VAMP1-202ENST00000396308 RANBP6O60518 1105 aaKnown RBP18.15■□□□□ 0.5
VAMP1-202ENST00000396308 C1QTNF8P60827 252 aa18.15■□□□□ 0.5
VAMP1-202ENST00000396308 CRACR2BQ8N4Y2 399 aaPredicted RBP18.15■□□□□ 0.5
VAMP1-202ENST00000396308 DDX4Q9NQI0 724 aaKnown RBP18.15■□□□□ 0.5
VAMP1-202ENST00000396308 GPRC5DQ9NZD1 345 aa18.15■□□□□ 0.5
VAMP1-202ENST00000396308 SWAP70Q9UH65 585 aa18.15■□□□□ 0.5
VAMP1-202ENST00000396308 TSPY2A6NKD2 308 aa18.14■□□□□ 0.49
VAMP1-202ENST00000396308 CD2BP2O95400 341 aaKnown RBP18.14■□□□□ 0.49
VAMP1-202ENST00000396308 CACNB3P54284 484 aa18.14■□□□□ 0.49
VAMP1-202ENST00000396308 EXOSC10Q01780 885 aaKnown RBP18.14■□□□□ 0.49
VAMP1-202ENST00000396308 TCP10Q12799 353 aa18.14■□□□□ 0.49
VAMP1-202ENST00000396308 CCDC178Q5BJE1 867 aa18.14■□□□□ 0.49
VAMP1-202ENST00000396308 RBM26Q5T8P6 1007 aaKnown RBP18.14■□□□□ 0.49
VAMP1-202ENST00000396308 ZNF444Q8N0Y2 327 aaPredicted RBP18.14■□□□□ 0.49
VAMP1-202ENST00000396308 TCEANC2Q96MN5 208 aa18.14■□□□□ 0.49
VAMP1-202ENST00000396308 SERPINB13Q9UIV8 391 aa18.14■□□□□ 0.49
VAMP1-202ENST00000396308 PCDHAC2Q9Y5I4 1007 aa18.14■□□□□ 0.49
VAMP1-202ENST00000396308 TCP10L2B9ZVM9 353 aa18.13■□□□□ 0.49
VAMP1-202ENST00000396308 WNT10BO00744 389 aa18.13■□□□□ 0.49
VAMP1-202ENST00000396308 NFIAQ12857 509 aa18.13■□□□□ 0.49
VAMP1-202ENST00000396308 TMEM67Q5HYA8 995 aa18.13■□□□□ 0.49
VAMP1-202ENST00000396308 C16orf86Q6ZW13 317 aa18.13■□□□□ 0.49
VAMP1-202ENST00000396308 BRF1Q92994 677 aa18.13■□□□□ 0.49
VAMP1-202ENST00000396308 EHD4Q9H223 541 aa18.13■□□□□ 0.49
VAMP1-202ENST00000396308 PI4KBQ9UBF8 816 aa18.13■□□□□ 0.49
VAMP1-202ENST00000396308 NAP1L2Q9ULW6 460 aaPredicted RBP18.13■□□□□ 0.49
VAMP1-202ENST00000396308 ANGEL1Q9UNK9 670 aaKnown RBP18.13■□□□□ 0.49
VAMP1-202ENST00000396308 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.13■□□□□ 0.49
VAMP1-202ENST00000396308 SCN4AP35499 1836 aa18.13■□□□□ 0.49
VAMP1-202ENST00000396308 ATRNL1Q5VV63 1379 aa18.13■□□□□ 0.49
VAMP1-202ENST00000396308 SIPA1L1O43166 1804 aa18.12■□□□□ 0.49
VAMP1-202ENST00000396308 IFIT3O14879 490 aaKnown RBP18.12■□□□□ 0.49
VAMP1-202ENST00000396308 FGRP09769 529 aa18.12■□□□□ 0.49
VAMP1-202ENST00000396308 TBC1D10BQ4KMP7 808 aaPredicted RBP18.12■□□□□ 0.49
VAMP1-202ENST00000396308 SYNE3Q6ZMZ3 975 aa18.12■□□□□ 0.49
VAMP1-202ENST00000396308 NFXL1Q6ZNB6 911 aa18.12■□□□□ 0.49
VAMP1-202ENST00000396308 CHST3Q7LGC8 479 aa18.12■□□□□ 0.49
VAMP1-202ENST00000396308 FAM83AQ86UY5 434 aa18.12■□□□□ 0.49
VAMP1-202ENST00000396308 TMTC2Q8N394 836 aa18.12■□□□□ 0.49
VAMP1-202ENST00000396308 FBXL16Q8N461 479 aa18.12■□□□□ 0.49
VAMP1-202ENST00000396308 FAM151AQ8WW52 585 aa18.12■□□□□ 0.49
VAMP1-202ENST00000396308 ZBED3Q96IU2 234 aaPredicted RBP18.12■□□□□ 0.49
VAMP1-202ENST00000396308 TMX3Q96JJ7 454 aa18.12■□□□□ 0.49
VAMP1-202ENST00000396308 FAM198AQ9UFP1 575 aa18.12■□□□□ 0.49
VAMP1-202ENST00000396308 CCDC69A6NI79 296 aa18.11■□□□□ 0.49
VAMP1-202ENST00000396308 PRDM1O75626 825 aa18.11■□□□□ 0.49
VAMP1-202ENST00000396308 TSPY3P0CV98 308 aa18.11■□□□□ 0.49
VAMP1-202ENST00000396308 TSPY8P0CW00 308 aa18.11■□□□□ 0.49
VAMP1-202ENST00000396308 PLCD1P51178 756 aa18.11■□□□□ 0.49
VAMP1-202ENST00000396308 TOB2Q14106 344 aaPredicted RBP18.11■□□□□ 0.49
VAMP1-202ENST00000396308 WTAPQ15007 396 aa18.11■□□□□ 0.49
VAMP1-202ENST00000396308 CYB5R4Q7L1T6 521 aa18.11■□□□□ 0.49
VAMP1-202ENST00000396308 APOBEC3FQ8IUX4 373 aaKnown RBP18.11■□□□□ 0.49
VAMP1-202ENST00000396308 DYNLL2Q96FJ2 89 aa18.11■□□□□ 0.49
VAMP1-202ENST00000396308 LRRC2Q9BYS8 371 aa18.11■□□□□ 0.49
VAMP1-202ENST00000396308 ZSWIM5Q9P217 1185 aa18.11■□□□□ 0.49
VAMP1-202ENST00000396308 SH2B2O14492 632 aaPredicted RBP18.1■□□□□ 0.49
VAMP1-202ENST00000396308 DDNO94850 711 aaPredicted RBP18.1■□□□□ 0.49
VAMP1-202ENST00000396308 SLC4A3P48751 1232 aa18.1■□□□□ 0.49
VAMP1-202ENST00000396308 CDK8P49336 464 aa18.1■□□□□ 0.49
VAMP1-202ENST00000396308 ANTXR2P58335 489 aa18.1■□□□□ 0.49
VAMP1-202ENST00000396308 NBPF9Q3BBW0 867 aa18.1■□□□□ 0.49
VAMP1-202ENST00000396308 PPP4R3BQ5MIZ7 849 aa18.1■□□□□ 0.49
VAMP1-202ENST00000396308 SAMD7Q7Z3H4 446 aa18.1■□□□□ 0.49
VAMP1-202ENST00000396308 CSRNP1Q96S65 589 aa18.1■□□□□ 0.49
VAMP1-202ENST00000396308 AGXT2Q9BYV1 514 aa18.1■□□□□ 0.49
VAMP1-202ENST00000396308 ADARB2Q9NS39 739 aaKnown RBP18.1■□□□□ 0.49
VAMP1-202ENST00000396308 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.1■□□□□ 0.49
VAMP1-202ENST00000396308 TNKSO95271 1327 aa18.09■□□□□ 0.49
VAMP1-202ENST00000396308 SHTN1A0MZ66 631 aa18.09■□□□□ 0.49
VAMP1-202ENST00000396308 FOXP4Q8IVH2 680 aaPredicted RBP18.09■□□□□ 0.49
VAMP1-202ENST00000396308 HOOK2Q96ED9 719 aa18.09■□□□□ 0.49
VAMP1-202ENST00000396308 ZSCAN10Q96SZ4 725 aaPredicted RBP18.09■□□□□ 0.49
VAMP1-202ENST00000396308 SLKQ9H2G2 1235 aaPredicted RBP18.09■□□□□ 0.49
VAMP1-202ENST00000396308 INCENPQ9NQS7 918 aa18.09■□□□□ 0.49
VAMP1-202ENST00000396308 HERC5Q9UII4 1024 aaKnown RBP18.09■□□□□ 0.49
VAMP1-202ENST00000396308 KLF18A0A0U1RQI7 1052 aa18.08■□□□□ 0.48
VAMP1-202ENST00000396308 IQCA1LA6NCM1 817 aa18.08■□□□□ 0.48
VAMP1-202ENST00000396308 GOLGA8BA8MQT2 603 aa18.08■□□□□ 0.48
VAMP1-202ENST00000396308 LIFRP42702 1097 aa18.08■□□□□ 0.48
VAMP1-202ENST00000396308 TFAP4Q01664 338 aa18.08■□□□□ 0.48
VAMP1-202ENST00000396308 APOBRQ0VD83 1088 aa18.08■□□□□ 0.48
VAMP1-202ENST00000396308 ZNF274Q96GC6 653 aaPredicted RBP18.08■□□□□ 0.48
VAMP1-202ENST00000396308 INTS4Q96HW7 963 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms