RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 GOLGA8HP0CJ92 632 aa16.52■□□□□ 0.24
SREBF1-205ENST00000395757 PRDX5P30044 214 aa16.52■□□□□ 0.24
SREBF1-205ENST00000395757 PIK3AP1Q6ZUJ8 805 aa16.52■□□□□ 0.24
SREBF1-205ENST00000395757 CCDC34Q96HJ3 373 aa16.52■□□□□ 0.24
SREBF1-205ENST00000395757 CACNA1FO60840 1977 aa16.52■□□□□ 0.24
SREBF1-205ENST00000395757 CCDC196A0A1B0GTZ2 297 aa16.52■□□□□ 0.24
SREBF1-205ENST00000395757 FANCBQ8NB91 859 aa16.52■□□□□ 0.24
SREBF1-205ENST00000395757 GPKOWQ92917 476 aaPredicted RBP eCLIP16.52■□□□□ 0.244e-7■■■□□ 16.3
SREBF1-205ENST00000395757 ADKP55263 362 aaKnown RBP16.52■□□□□ 0.23
SREBF1-205ENST00000395757 MARCH10Q8NA82 808 aaPredicted RBP16.52■□□□□ 0.23
SREBF1-205ENST00000395757 WASF1Q92558 559 aa16.52■□□□□ 0.23
SREBF1-205ENST00000395757 SOS2Q07890 1332 aaPredicted RBP16.52■□□□□ 0.23
SREBF1-205ENST00000395757 RIMBP2O15034 1052 aa16.51■□□□□ 0.23
SREBF1-205ENST00000395757 PICALMQ13492 652 aa16.51■□□□□ 0.23
SREBF1-205ENST00000395757 DIXDC1Q155Q3 683 aa16.51■□□□□ 0.23
SREBF1-205ENST00000395757 CNNM2Q9H8M5 875 aa16.51■□□□□ 0.23
SREBF1-205ENST00000395757 LY9Q9HBG7 655 aa16.51■□□□□ 0.23
SREBF1-205ENST00000395757 RFC4P35249 363 aa16.51■□□□□ 0.23
SREBF1-205ENST00000395757 CCT6AP40227 531 aaKnown RBP16.51■□□□□ 0.23
SREBF1-205ENST00000395757 KIF18AQ8NI77 898 aa16.51■□□□□ 0.23
SREBF1-205ENST00000395757 MROH7-TTC4A0A0A0MT08 1334 aa16.51■□□□□ 0.23
SREBF1-205ENST00000395757 YEATS4O95619 227 aa16.51■□□□□ 0.23
SREBF1-205ENST00000395757 NOSTRINQ8IVI9 506 aa16.51■□□□□ 0.23
SREBF1-205ENST00000395757 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.51■□□□□ 0.23
SREBF1-205ENST00000395757 TRIM75PA6NK02 468 aa16.5■□□□□ 0.23
SREBF1-205ENST00000395757 TMEM232C9JQI7 657 aa16.5■□□□□ 0.23
SREBF1-205ENST00000395757 SLC39A14Q15043 492 aa16.5■□□□□ 0.23
SREBF1-205ENST00000395757 IQCB1Q15051 598 aa16.5■□□□□ 0.23
SREBF1-205ENST00000395757 HEATR3Q7Z4Q2 680 aa16.5■□□□□ 0.23
SREBF1-205ENST00000395757 ADGRA1Q86SQ6 560 aa16.5■□□□□ 0.23
SREBF1-205ENST00000395757 DYNLL2Q96FJ2 89 aa16.5■□□□□ 0.23
SREBF1-205ENST00000395757 EPSTI1Q96J88 318 aa16.5■□□□□ 0.23
SREBF1-205ENST00000395757 DESI2Q9BSY9 194 aa16.5■□□□□ 0.23
SREBF1-205ENST00000395757 NFE2L3Q9Y4A8 694 aa16.5■□□□□ 0.23
SREBF1-205ENST00000395757 AMOTL1Q8IY63 956 aa16.5■□□□□ 0.23
SREBF1-205ENST00000395757 NBPF3Q9H094 633 aa16.5■□□□□ 0.23
SREBF1-205ENST00000395757 RNF216Q9NWF9 866 aaPredicted RBP16.5■□□□□ 0.23
SREBF1-205ENST00000395757 UBAP1LF5GYI3 381 aa16.5■□□□□ 0.23
SREBF1-205ENST00000395757 MAPKAPK5Q8IW41 473 aa16.5■□□□□ 0.23
SREBF1-205ENST00000395757 DHX40Q8IX18 779 aaKnown RBP16.5■□□□□ 0.23
SREBF1-205ENST00000395757 DPF2Q92785 391 aa16.5■□□□□ 0.23
SREBF1-205ENST00000395757 SHC4Q6S5L8 630 aa16.49■□□□□ 0.23
SREBF1-205ENST00000395757 ZNF771Q7L3S4 317 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-205ENST00000395757 NLRP12P59046 1061 aa16.49■□□□□ 0.23
SREBF1-205ENST00000395757 RPS8P62241 208 aaKnown RBP16.49■□□□□ 0.23
SREBF1-205ENST00000395757 TRIM28Q13263 835 aaKnown RBP16.49■□□□□ 0.23
SREBF1-205ENST00000395757 NKX1-1Q15270 411 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-205ENST00000395757 NOM1Q5C9Z4 860 aaKnown RBP16.49■□□□□ 0.23
SREBF1-205ENST00000395757 ZNF215Q9UL58 517 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-205ENST00000395757 USP17L8P0C7I0 530 aa16.49■□□□□ 0.23
SREBF1-205ENST00000395757 HIBADHP31937 336 aaKnown RBP16.49■□□□□ 0.23
SREBF1-205ENST00000395757 MYL5Q02045 173 aa16.49■□□□□ 0.23
SREBF1-205ENST00000395757 COL5A2P05997 1499 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-205ENST00000395757 SSBP05455 408 aaKnown RBP eCLIP16.48■□□□□ 0.23
SREBF1-205ENST00000395757 PRR29P0C7W0 189 aa16.48■□□□□ 0.23
SREBF1-205ENST00000395757 CMA1P23946 247 aa16.48■□□□□ 0.23
SREBF1-205ENST00000395757 SLC44A5Q8NCS7 719 aa16.48■□□□□ 0.23
SREBF1-205ENST00000395757 LZTFL1Q9NQ48 299 aa16.48■□□□□ 0.23
SREBF1-205ENST00000395757 CCNL1Q9UK58 526 aaPredicted RBP16.48■□□□□ 0.23
SREBF1-205ENST00000395757 CHD2O14647 1828 aaKnown RBP16.48■□□□□ 0.23
SREBF1-205ENST00000395757 SRCAPQ6ZRS2 3230 aa16.48■□□□□ 0.23
SREBF1-205ENST00000395757 CPDO75976 1380 aa16.48■□□□□ 0.23
SREBF1-205ENST00000395757 TBC1D9BQ66K14 1250 aa16.48■□□□□ 0.23
SREBF1-205ENST00000395757 ZNF444Q8N0Y2 327 aaPredicted RBP16.48■□□□□ 0.23
SREBF1-205ENST00000395757 IGDCC4Q8TDY8 1250 aa16.48■□□□□ 0.23
SREBF1-205ENST00000395757 CSRNP2Q9H175 543 aa16.48■□□□□ 0.23
SREBF1-205ENST00000395757 POLR3EQ9NVU0 708 aa16.48■□□□□ 0.23
SREBF1-205ENST00000395757 GNG11P61952 73 aa16.48■□□□□ 0.23
SREBF1-205ENST00000395757 ELF2Q15723 593 aa16.48■□□□□ 0.23
SREBF1-205ENST00000395757 IL17RAQ96F46 866 aa16.48■□□□□ 0.23
SREBF1-205ENST00000395757 ALDH8A1Q9H2A2 487 aaPredicted RBP16.48■□□□□ 0.23
SREBF1-205ENST00000395757 KAT14Q9H8E8 782 aa16.48■□□□□ 0.23
SREBF1-205ENST00000395757 FAM170AA1A519 330 aa16.47■□□□□ 0.23
SREBF1-205ENST00000395757 IRX3P78415 501 aaPredicted RBP16.47■□□□□ 0.23
SREBF1-205ENST00000395757 TEX2Q8IWB9 1127 aa16.47■□□□□ 0.23
SREBF1-205ENST00000395757 TGFBRAP1Q8WUH2 860 aa16.47■□□□□ 0.23
SREBF1-205ENST00000395757 CRNKL1Q9BZJ0 848 aaKnown RBP16.47■□□□□ 0.23
SREBF1-205ENST00000395757 ZBTB22O15209 634 aa16.47■□□□□ 0.23
SREBF1-205ENST00000395757 EIF5P55010 431 aaKnown RBP16.47■□□□□ 0.23
SREBF1-205ENST00000395757 PLA2G4DQ86XP0 818 aa16.47■□□□□ 0.23
SREBF1-205ENST00000395757 MAP7D2Q96T17 732 aa16.47■□□□□ 0.23
SREBF1-205ENST00000395757 DEXIO95424 95 aa16.47■□□□□ 0.23
SREBF1-205ENST00000395757 PARP10Q53GL7 1025 aa16.47■□□□□ 0.23
SREBF1-205ENST00000395757 TEX35Q5T0J7 233 aa16.47■□□□□ 0.23
SREBF1-205ENST00000395757 PPFIBP1Q86W92 1011 aa16.47■□□□□ 0.23
SREBF1-205ENST00000395757 ENGASEQ8NFI3 743 aa16.47■□□□□ 0.23
SREBF1-205ENST00000395757 TFAP4Q01664 338 aa16.46■□□□□ 0.23
SREBF1-205ENST00000395757 MPHOSPH10O00566 681 aaKnown RBP16.46■□□□□ 0.23
SREBF1-205ENST00000395757 RRAGBQ5VZM2 374 aa16.46■□□□□ 0.23
SREBF1-205ENST00000395757 INTS5Q6P9B9 1019 aaKnown RBP16.46■□□□□ 0.23
SREBF1-205ENST00000395757 SAMSN1Q9NSI8 373 aaKnown RBP16.46■□□□□ 0.23
SREBF1-205ENST00000395757 RTCBQ9Y3I0 505 aaKnown RBP16.46■□□□□ 0.23
SREBF1-205ENST00000395757 CAVIN2O95810 425 aa16.46■□□□□ 0.22
SREBF1-205ENST00000395757 TSPY3P0CV98 308 aa16.46■□□□□ 0.22
SREBF1-205ENST00000395757 TSPY8P0CW00 308 aa16.46■□□□□ 0.22
SREBF1-205ENST00000395757 POSTNQ15063 836 aa16.46■□□□□ 0.22
SREBF1-205ENST00000395757 ZNF34Q8IZ26 560 aa16.46■□□□□ 0.22
SREBF1-205ENST00000395757 VPS16Q9H269 839 aa16.46■□□□□ 0.22
SREBF1-205ENST00000395757 ZHX3Q9H4I2 956 aa16.46■□□□□ 0.22
SREBF1-205ENST00000395757 CCDC194A0A1B0GVG4 234 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms