RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 LOC285556D6RIA3 1793 aa23.66■■□□□ 1.38
COL11A2-204ENST00000395194 TREML2Q5T2D2 321 aa23.66■■□□□ 1.38
COL11A2-204ENST00000395194 FTSJ3Q8IY81 847 aaKnown RBP23.66■■□□□ 1.38
COL11A2-204ENST00000395194 SHISA4Q96DD7 197 aa23.66■■□□□ 1.38
COL11A2-204ENST00000395194 TBC1D12O60347 775 aa23.65■■□□□ 1.38
COL11A2-204ENST00000395194 NPM3O75607 178 aaKnown RBP23.65■■□□□ 1.38
COL11A2-204ENST00000395194 SURF6O75683 361 aaKnown RBP23.65■■□□□ 1.38
COL11A2-204ENST00000395194 RRP1BQ14684 758 aaKnown RBP23.65■■□□□ 1.38
COL11A2-204ENST00000395194 HABP4Q5JVS0 413 aaKnown RBP23.65■■□□□ 1.38
COL11A2-204ENST00000395194 NAA16Q6N069 864 aaPredicted RBP23.65■■□□□ 1.38
COL11A2-204ENST00000395194 ITPRIPQ8IWB1 547 aa23.65■■□□□ 1.38
COL11A2-204ENST00000395194 NOL10Q9BSC4 688 aaKnown RBP23.65■■□□□ 1.38
COL11A2-204ENST00000395194 COL2A1P02458 1487 aaPredicted RBP23.64■■□□□ 1.38
COL11A2-204ENST00000395194 RLBP1P12271 317 aa23.64■■□□□ 1.37
COL11A2-204ENST00000395194 CCL5P13501 91 aa23.64■■□□□ 1.37
COL11A2-204ENST00000395194 ATP8B2P98198 1209 aa23.64■■□□□ 1.37
COL11A2-204ENST00000395194 SPP2Q13103 211 aa23.64■■□□□ 1.37
COL11A2-204ENST00000395194 CCDC158Q5M9N0 1113 aa23.64■■□□□ 1.37
COL11A2-204ENST00000395194 SSH3Q8TE77 659 aa23.64■■□□□ 1.37
COL11A2-204ENST00000395194 AGTPBP1Q9UPW5 1226 aa23.64■■□□□ 1.37
COL11A2-204ENST00000395194 TRIOBPQ9H2D6 2365 aa23.63■■□□□ 1.37
COL11A2-204ENST00000395194 ADGRA1Q86SQ6 560 aa23.63■■□□□ 1.37
COL11A2-204ENST00000395194 MAPKAPK5Q8IW41 473 aa23.63■■□□□ 1.37
COL11A2-204ENST00000395194 ANKRD13CQ8N6S4 541 aa23.63■■□□□ 1.37
COL11A2-204ENST00000395194 GPR108Q9NPR9 543 aa23.63■■□□□ 1.37
COL11A2-204ENST00000395194 TLR7Q9NYK1 1049 aaKnown RBP23.63■■□□□ 1.37
COL11A2-204ENST00000395194 SLC45A1Q9Y2W3 748 aa23.63■■□□□ 1.37
COL11A2-204ENST00000395194 MAP4K4O95819 1239 aaPredicted RBP23.62■■□□□ 1.37
COL11A2-204ENST00000395194 CYP2E1P05181 493 aaPredicted RBP23.62■■□□□ 1.37
COL11A2-204ENST00000395194 HMGCS2P54868 508 aa23.62■■□□□ 1.37
COL11A2-204ENST00000395194 RNF208Q9H0X6 261 aa23.62■■□□□ 1.37
COL11A2-204ENST00000395194 TAOK2Q9UL54 1235 aa23.62■■□□□ 1.37
COL11A2-204ENST00000395194 MYH1P12882 1939 aa23.61■■□□□ 1.37
COL11A2-204ENST00000395194 TNPO2O14787 897 aaKnown RBP23.61■■□□□ 1.37
COL11A2-204ENST00000395194 ELNP15502 786 aa23.61■■□□□ 1.37
COL11A2-204ENST00000395194 CAP2P40123 477 aa23.61■■□□□ 1.37
COL11A2-204ENST00000395194 ZAP70P43403 619 aa23.61■■□□□ 1.37
COL11A2-204ENST00000395194 FLT3LGP49771 235 aa23.61■■□□□ 1.37
COL11A2-204ENST00000395194 UBXN2AP68543 259 aa23.61■■□□□ 1.37
COL11A2-204ENST00000395194 MIER1Q8N108 512 aa23.61■■□□□ 1.37
COL11A2-204ENST00000395194 ZNF280CQ8ND82 737 aa23.61■■□□□ 1.37
COL11A2-204ENST00000395194 TGFBRAP1Q8WUH2 860 aa23.61■■□□□ 1.37
COL11A2-204ENST00000395194 CCDC8Q9H0W5 538 aaPredicted RBP23.61■■□□□ 1.37
COL11A2-204ENST00000395194 ADCY3O60266 1144 aa23.6■■□□□ 1.37
COL11A2-204ENST00000395194 BAG3O95817 575 aa23.6■■□□□ 1.37
COL11A2-204ENST00000395194 SLAIN1Q8ND83 568 aa23.6■■□□□ 1.37
COL11A2-204ENST00000395194 PIH1D3Q9NQM4 214 aaKnown RBP23.6■■□□□ 1.37
COL11A2-204ENST00000395194 DBNLQ9UJU6 430 aaKnown RBP23.6■■□□□ 1.37
COL11A2-204ENST00000395194 PROCA1Q8NCQ7 364 aaPredicted RBP23.59■■□□□ 1.37
COL11A2-204ENST00000395194 UNC93B1Q9H1C4 597 aa23.59■■□□□ 1.37
COL11A2-204ENST00000395194 PCDH10Q9P2E7 1040 aa23.59■■□□□ 1.37
COL11A2-204ENST00000395194 PNMA3Q9UL41 463 aa23.59■■□□□ 1.37
COL11A2-204ENST00000395194 FLT1P17948 1338 aa23.59■■□□□ 1.37
COL11A2-204ENST00000395194 USP17L5A8MUK1 530 aa23.58■■□□□ 1.37
COL11A2-204ENST00000395194 H0YGN5 161 aa23.58■■□□□ 1.37
COL11A2-204ENST00000395194 GJB1P08034 283 aa23.58■■□□□ 1.37
COL11A2-204ENST00000395194 DYNLL1P63167 89 aaKnown RBP23.58■■□□□ 1.37
COL11A2-204ENST00000395194 SHROOM1Q2M3G4 852 aaPredicted RBP23.58■■□□□ 1.37
COL11A2-204ENST00000395194 PI4KBQ9UBF8 816 aa23.58■■□□□ 1.37
COL11A2-204ENST00000395194 SAP30BPQ9UHR5 308 aaKnown RBP23.58■■□□□ 1.37
COL11A2-204ENST00000395194 HERC5Q9UII4 1024 aaKnown RBP23.58■■□□□ 1.37
COL11A2-204ENST00000395194 NDUFB9Q9Y6M9 179 aa23.58■■□□□ 1.37
COL11A2-204ENST00000395194 ZBTB7BO15156 539 aaPredicted RBP23.57■■□□□ 1.36
COL11A2-204ENST00000395194 PLCG2P16885 1265 aa23.57■■□□□ 1.36
COL11A2-204ENST00000395194 GJA8P48165 433 aa23.57■■□□□ 1.36
COL11A2-204ENST00000395194 DNAJC18Q9H819 358 aa23.57■■□□□ 1.36
COL11A2-204ENST00000395194 PALD1Q9ULE6 856 aa23.57■■□□□ 1.36
COL11A2-204ENST00000395194 GDF11O95390 407 aa23.56■■□□□ 1.36
COL11A2-204ENST00000395194 INHAP05111 366 aa23.56■■□□□ 1.36
COL11A2-204ENST00000395194 PPP4CP60510 307 aa23.56■■□□□ 1.36
COL11A2-204ENST00000395194 JAG1P78504 1218 aa23.56■■□□□ 1.36
COL11A2-204ENST00000395194 FAM110CQ1W6H9 321 aa23.56■■□□□ 1.36
COL11A2-204ENST00000395194 CRACR2BQ8N4Y2 399 aaPredicted RBP23.56■■□□□ 1.36
COL11A2-204ENST00000395194 NKX2-3Q8TAU0 364 aa23.56■■□□□ 1.36
COL11A2-204ENST00000395194 U2AF1L4Q8WU68 220 aaKnown RBP23.56■■□□□ 1.36
COL11A2-204ENST00000395194 DPF3Q92784 378 aa23.56■■□□□ 1.36
COL11A2-204ENST00000395194 EAF2Q96CJ1 260 aaPredicted RBP23.56■■□□□ 1.36
COL11A2-204ENST00000395194 DHX36Q9H2U1 1008 aaKnown RBP23.56■■□□□ 1.36
COL11A2-204ENST00000395194 COLQQ9Y215 455 aaPredicted RBP23.56■■□□□ 1.36
COL11A2-204ENST00000395194 NOP58Q9Y2X3 529 aaKnown RBP23.56■■□□□ 1.36
COL11A2-204ENST00000395194 IDH1O75874 414 aaKnown RBP23.55■■□□□ 1.36
COL11A2-204ENST00000395194 CYP7A1P22680 504 aa23.55■■□□□ 1.36
COL11A2-204ENST00000395194 MTMR2Q13614 643 aa23.55■■□□□ 1.36
COL11A2-204ENST00000395194 COA7Q96BR5 231 aa23.55■■□□□ 1.36
COL11A2-204ENST00000395194 TRIM34Q9BYJ4 488 aa23.55■■□□□ 1.36
COL11A2-204ENST00000395194 ASCC2Q9H1I8 757 aaPredicted RBP23.55■■□□□ 1.36
COL11A2-204ENST00000395194 AS3MTQ9HBK9 375 aa23.55■■□□□ 1.36
COL11A2-204ENST00000395194 CEP85Q6P2H3 762 aa23.54■■□□□ 1.36
COL11A2-204ENST00000395194 MIGA1Q8NAN2 632 aa23.54■■□□□ 1.36
COL11A2-204ENST00000395194 PANK1Q8TE04 598 aa23.54■■□□□ 1.36
COL11A2-204ENST00000395194 ZNF512BQ96KM6 892 aaPredicted RBP23.54■■□□□ 1.36
COL11A2-204ENST00000395194 TBC1D2Q9BYX2 928 aa23.54■■□□□ 1.36
COL11A2-204ENST00000395194 EXOC6BQ9Y2D4 811 aa23.54■■□□□ 1.36
COL11A2-204ENST00000395194 PABPC4Q13310 644 aaKnown RBP eCLIP23.53■■□□□ 1.36
COL11A2-204ENST00000395194 PLXNB2O15031 1838 aa23.52■■□□□ 1.36
COL11A2-204ENST00000395194 PEX10O60683 326 aa23.52■■□□□ 1.36
COL11A2-204ENST00000395194 FARP2O94887 1054 aaPredicted RBP23.52■■□□□ 1.36
COL11A2-204ENST00000395194 ASNSP08243 561 aa23.52■■□□□ 1.36
COL11A2-204ENST00000395194 IRF5Q13568 498 aa23.52■■□□□ 1.36
COL11A2-204ENST00000395194 SH3D19Q5HYK7 790 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms