RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 APBB1O00213 710 aa10.84□□□□□ -0.67
ATG4A-205ENST00000394892 PDHXO00330 501 aa10.84□□□□□ -0.67
ATG4A-205ENST00000394892 CXCL11O14625 94 aa10.84□□□□□ -0.67
ATG4A-205ENST00000394892 CTNND1O60716 968 aaKnown RBP10.84□□□□□ -0.67
ATG4A-205ENST00000394892 MAP4K4O95819 1239 aaPredicted RBP10.84□□□□□ -0.67
ATG4A-205ENST00000394892 CYP2C8P10632 490 aa10.84□□□□□ -0.67
ATG4A-205ENST00000394892 EN2P19622 333 aaPredicted RBP10.84□□□□□ -0.67
ATG4A-205ENST00000394892 CYP7A1P22680 504 aa10.84□□□□□ -0.67
ATG4A-205ENST00000394892 EVX2Q03828 476 aa10.84□□□□□ -0.67
ATG4A-205ENST00000394892 SLFNL1Q499Z3 407 aa10.84□□□□□ -0.67
ATG4A-205ENST00000394892 PRRT2Q7Z6L0 340 aaPredicted RBP10.84□□□□□ -0.67
ATG4A-205ENST00000394892 METTL16Q86W50 562 aaKnown RBP10.84□□□□□ -0.67
ATG4A-205ENST00000394892 MIGA1Q8NAN2 632 aa10.84□□□□□ -0.67
ATG4A-205ENST00000394892 TGFBRAP1Q8WUH2 860 aa10.84□□□□□ -0.67
ATG4A-205ENST00000394892 ZCCHC17Q9NP64 241 aaKnown RBP10.84□□□□□ -0.67
ATG4A-205ENST00000394892 CPA4Q9UI42 421 aa10.84□□□□□ -0.67
ATG4A-205ENST00000394892 COL2A1P02458 1487 aaPredicted RBP10.84□□□□□ -0.67
ATG4A-205ENST00000394892 FLT1P17948 1338 aa10.84□□□□□ -0.67
ATG4A-205ENST00000394892 BRCA2P51587 3418 aa10.83□□□□□ -0.68
ATG4A-205ENST00000394892 IDH1O75874 414 aaKnown RBP10.83□□□□□ -0.68
ATG4A-205ENST00000394892 ECM2O94769 699 aaPredicted RBP10.83□□□□□ -0.68
ATG4A-205ENST00000394892 BCRP11274 1271 aa10.83□□□□□ -0.68
ATG4A-205ENST00000394892 LACTBP83111 547 aaPredicted RBP10.83□□□□□ -0.68
ATG4A-205ENST00000394892 PDE3AQ14432 1141 aa10.83□□□□□ -0.68
ATG4A-205ENST00000394892 RIOK1Q9BRS2 568 aaKnown RBP10.83□□□□□ -0.68
ATG4A-205ENST00000394892 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.83□□□□□ -0.68
ATG4A-205ENST00000394892 PALD1Q9ULE6 856 aa10.83□□□□□ -0.68
ATG4A-205ENST00000394892 PTCH2Q9Y6C5 1203 aa10.83□□□□□ -0.68
ATG4A-205ENST00000394892 MYH13Q9UKX3 1938 aa10.83□□□□□ -0.68
ATG4A-205ENST00000394892 CENPFP49454 3210 aa10.82□□□□□ -0.68
ATG4A-205ENST00000394892 MYH2Q9UKX2 1941 aa10.82□□□□□ -0.68
ATG4A-205ENST00000394892 TCRBV5S4A2TA0A5A2 114 aa10.82□□□□□ -0.68
ATG4A-205ENST00000394892 TRIM75PA6NK02 468 aa10.82□□□□□ -0.68
ATG4A-205ENST00000394892 SMARCA5O60264 1052 aaPredicted RBP10.82□□□□□ -0.68
ATG4A-205ENST00000394892 MS4A1P11836 297 aa10.82□□□□□ -0.68
ATG4A-205ENST00000394892 CAP2P40123 477 aa10.82□□□□□ -0.68
ATG4A-205ENST00000394892 TREML2Q5T2D2 321 aa10.82□□□□□ -0.68
ATG4A-205ENST00000394892 ERC1Q8IUD2 1116 aa10.82□□□□□ -0.68
ATG4A-205ENST00000394892 MAGEB6Q8N7X4 407 aa10.82□□□□□ -0.68
ATG4A-205ENST00000394892 KIF1BPQ96EK5 621 aa10.82□□□□□ -0.68
ATG4A-205ENST00000394892 ZNF333Q96JL9 665 aa10.82□□□□□ -0.68
ATG4A-205ENST00000394892 TRIM47Q96LD4 638 aa10.82□□□□□ -0.68
ATG4A-205ENST00000394892 PICK1Q9NRD5 415 aa10.82□□□□□ -0.68
ATG4A-205ENST00000394892 SAP30BPQ9UHR5 308 aaKnown RBP10.82□□□□□ -0.68
ATG4A-205ENST00000394892 SMIM22K7EJ46 135 aa10.81□□□□□ -0.68
ATG4A-205ENST00000394892 GNRH1P01148 92 aa10.81□□□□□ -0.68
ATG4A-205ENST00000394892 PRMT2P55345 433 aa10.81□□□□□ -0.68
ATG4A-205ENST00000394892 SPP2Q13103 211 aa10.81□□□□□ -0.68
ATG4A-205ENST00000394892 POTEEQ6S8J3 1075 aa10.81□□□□□ -0.68
ATG4A-205ENST00000394892 ZSWIM8A7E2V4 1837 aa10.8□□□□□ -0.68
ATG4A-205ENST00000394892 SIPA1L1O43166 1804 aa10.8□□□□□ -0.68
ATG4A-205ENST00000394892 GOLIM4O00461 696 aa10.8□□□□□ -0.68
ATG4A-205ENST00000394892 RAB11FIP3O75154 756 aa10.8□□□□□ -0.68
ATG4A-205ENST00000394892 BAG3O95817 575 aa10.8□□□□□ -0.68
ATG4A-205ENST00000394892 PDE6AP16499 860 aa10.8□□□□□ -0.68
ATG4A-205ENST00000394892 HSP90AB4PQ58FF6 505 aa10.8□□□□□ -0.68
ATG4A-205ENST00000394892 GADL1Q6ZQY3 521 aa10.8□□□□□ -0.68
ATG4A-205ENST00000394892 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.8□□□□□ -0.68
ATG4A-205ENST00000394892 PI4KBQ9UBF8 816 aa10.8□□□□□ -0.68
ATG4A-205ENST00000394892 PCDHB15Q9Y5E8 787 aa10.8□□□□□ -0.68
ATG4A-205ENST00000394892 MKI67P46013 3256 aaKnown RBP10.8□□□□□ -0.68
ATG4A-205ENST00000394892 PEX10O60683 326 aa10.79□□□□□ -0.68
ATG4A-205ENST00000394892 IGSF3O75054 1194 aa10.79□□□□□ -0.68
ATG4A-205ENST00000394892 HMMRO75330 724 aa10.79□□□□□ -0.68
ATG4A-205ENST00000394892 GDF11O95390 407 aa10.79□□□□□ -0.68
ATG4A-205ENST00000394892 MYCP01106 439 aaPredicted RBP10.79□□□□□ -0.68
ATG4A-205ENST00000394892 PLCG2P16885 1265 aa10.79□□□□□ -0.68
ATG4A-205ENST00000394892 OSBPP22059 807 aa10.79□□□□□ -0.68
ATG4A-205ENST00000394892 HOXD10P28358 340 aa10.79□□□□□ -0.68
ATG4A-205ENST00000394892 PSMC4P43686 418 aa10.79□□□□□ -0.68
ATG4A-205ENST00000394892 PLCD1P51178 756 aa10.79□□□□□ -0.68
ATG4A-205ENST00000394892 SH3D19Q5HYK7 790 aa10.79□□□□□ -0.68
ATG4A-205ENST00000394892 CLASRPQ8N2M8 674 aaKnown RBP10.79□□□□□ -0.68
ATG4A-205ENST00000394892 SH3TC2Q8TF17 1288 aa10.79□□□□□ -0.68
ATG4A-205ENST00000394892 DNAJC2Q99543 621 aaKnown RBP10.79□□□□□ -0.68
ATG4A-205ENST00000394892 BCL11AQ9H165 835 aa10.79□□□□□ -0.68
ATG4A-205ENST00000394892 DHX36Q9H2U1 1008 aaKnown RBP10.79□□□□□ -0.68
ATG4A-205ENST00000394892 BOLA2Q9H3K6 86 aa10.79□□□□□ -0.68
ATG4A-205ENST00000394892 HERC5Q9UII4 1024 aaKnown RBP10.79□□□□□ -0.68
ATG4A-205ENST00000394892 ZNF532Q9HCE3 1301 aa10.79□□□□□ -0.68
ATG4A-205ENST00000394892 USP17L5A8MUK1 530 aa10.78□□□□□ -0.68
ATG4A-205ENST00000394892 PRKAB2O43741 272 aa10.78□□□□□ -0.68
ATG4A-205ENST00000394892 IFIT2P09913 472 aaKnown RBP10.78□□□□□ -0.68
ATG4A-205ENST00000394892 CYP2D6P10635 497 aa10.78□□□□□ -0.68
ATG4A-205ENST00000394892 ATP5JP18859 108 aa10.78□□□□□ -0.68
ATG4A-205ENST00000394892 FXR1P51114 621 aaKnown RBP eCLIP10.78□□□□□ -0.68
ATG4A-205ENST00000394892 HMGCS2P54868 508 aa10.78□□□□□ -0.68
ATG4A-205ENST00000394892 GABPAQ06546 454 aa10.78□□□□□ -0.68
ATG4A-205ENST00000394892 MAP3K12Q12852 859 aa10.78□□□□□ -0.68
ATG4A-205ENST00000394892 SLC9C2Q5TAH2 1124 aa10.78□□□□□ -0.68
ATG4A-205ENST00000394892 FASTKD5Q7L8L6 764 aaKnown RBP10.78□□□□□ -0.68
ATG4A-205ENST00000394892 FOXP4Q8IVH2 680 aaPredicted RBP10.78□□□□□ -0.68
ATG4A-205ENST00000394892 LCORLQ8N3X6 602 aa10.78□□□□□ -0.68
ATG4A-205ENST00000394892 ZNF280CQ8ND82 737 aa10.78□□□□□ -0.68
ATG4A-205ENST00000394892 NKX2-3Q8TAU0 364 aa10.78□□□□□ -0.68
ATG4A-205ENST00000394892 WDR18Q9BV38 432 aa10.78□□□□□ -0.68
ATG4A-205ENST00000394892 DCTPP1Q9H773 170 aa10.78□□□□□ -0.68
ATG4A-205ENST00000394892 SRRDQ9UH36 339 aa10.78□□□□□ -0.68
ATG4A-205ENST00000394892 GABRQQ9UN88 632 aa10.78□□□□□ -0.68
ATG4A-205ENST00000394892 AGTPBP1Q9UPW5 1226 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms