RNA–Protein interactions for RNA: ENST00000394738.7

RFT1-202, Transcript of RFT1 homolog, humanhuman

TSL 5 BASIC

Gene RFT1, Length 1,800 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1-202ENST00000394738 PPP2R3BQ9Y5P8 575 aa24.28■■□□□ 1.48
RFT1-202ENST00000394738 TAF6LQ9Y6J9 622 aa24.28■■□□□ 1.48
RFT1-202ENST00000394738 HSPA4P34932 840 aa24.28■■□□□ 1.48
RFT1-202ENST00000394738 INCENPQ9NQS7 918 aa24.28■■□□□ 1.48
RFT1-202ENST00000394738 EPB41L2O43491 1005 aaKnown RBP24.27■■□□□ 1.48
RFT1-202ENST00000394738 FAM196BA6NMK8 535 aa24.26■■□□□ 1.47
RFT1-202ENST00000394738 CHADLQ6NUI6 762 aa24.26■■□□□ 1.47
RFT1-202ENST00000394738 MIGA2Q7L4E1 593 aa24.26■■□□□ 1.47
RFT1-202ENST00000394738 ANAPC4Q9UJX5 808 aa24.26■■□□□ 1.47
RFT1-202ENST00000394738 TACC3Q9Y6A5 838 aa24.26■■□□□ 1.47
RFT1-202ENST00000394738 TRAF5O00463 557 aa24.26■■□□□ 1.47
RFT1-202ENST00000394738 FMR1Q06787 632 aaKnown RBP eCLIP24.26■■□□□ 1.47
RFT1-202ENST00000394738 TBC1D10CQ8IV04 446 aa24.26■■□□□ 1.47
RFT1-202ENST00000394738 RASEFQ8IZ41 740 aa24.26■■□□□ 1.47
RFT1-202ENST00000394738 SLC44A5Q8NCS7 719 aa24.26■■□□□ 1.47
RFT1-202ENST00000394738 CDCA5Q96FF9 252 aa24.26■■□□□ 1.47
RFT1-202ENST00000394738 SERPINB13Q9UIV8 391 aa24.26■■□□□ 1.47
RFT1-202ENST00000394738 CRACR2BQ8N4Y2 399 aaPredicted RBP24.24■■□□□ 1.47
RFT1-202ENST00000394738 DNAJC18Q9H819 358 aa24.24■■□□□ 1.47
RFT1-202ENST00000394738 FZD1Q9UP38 647 aa24.24■■□□□ 1.47
RFT1-202ENST00000394738 SSC5DA1L4H1 1573 aa24.24■■□□□ 1.47
RFT1-202ENST00000394738 MCCP23508 829 aa24.24■■□□□ 1.47
RFT1-202ENST00000394738 GABPAQ06546 454 aa24.24■■□□□ 1.47
RFT1-202ENST00000394738 RNF20Q5VTR2 975 aa24.24■■□□□ 1.47
RFT1-202ENST00000394738 FOXP4Q8IVH2 680 aaPredicted RBP24.24■■□□□ 1.47
RFT1-202ENST00000394738 EHD4Q9H223 541 aa24.24■■□□□ 1.47
RFT1-202ENST00000394738 UPF2Q9HAU5 1272 aaKnown RBP24.24■■□□□ 1.47
RFT1-202ENST00000394738 ROBO3Q96MS0 1386 aa24.24■■□□□ 1.47
RFT1-202ENST00000394738 TRIM34Q9BYJ4 488 aa24.23■■□□□ 1.47
RFT1-202ENST00000394738 C22orf23Q9BZE7 217 aa24.23■■□□□ 1.47
RFT1-202ENST00000394738 PRDM1O75626 825 aa24.22■■□□□ 1.47
RFT1-202ENST00000394738 SLC3A2P08195 630 aaKnown RBP24.22■■□□□ 1.47
RFT1-202ENST00000394738 CDK8P49336 464 aa24.22■■□□□ 1.47
RFT1-202ENST00000394738 SUPT20HL1Q3ZLR7 823 aa24.22■■□□□ 1.47
RFT1-202ENST00000394738 AKNAD1Q5T1N1 836 aa24.22■■□□□ 1.47
RFT1-202ENST00000394738 STOX1Q6ZVD7 989 aa24.22■■□□□ 1.47
RFT1-202ENST00000394738 C16orf86Q6ZW13 317 aa24.22■■□□□ 1.47
RFT1-202ENST00000394738 METTL16Q86W50 562 aaKnown RBP24.22■■□□□ 1.47
RFT1-202ENST00000394738 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.22■■□□□ 1.47
RFT1-202ENST00000394738 SNX14Q9Y5W7 946 aa24.22■■□□□ 1.47
RFT1-202ENST00000394738 E7EWF7 191 aa24.21■■□□□ 1.47
RFT1-202ENST00000394738 PRKG1Q13976 671 aa24.21■■□□□ 1.47
RFT1-202ENST00000394738 KCNB2Q92953 911 aa24.21■■□□□ 1.47
RFT1-202ENST00000394738 TRPM7Q96QT4 1865 aa24.21■■□□□ 1.47
RFT1-202ENST00000394738 ITGBL1O95965 494 aaPredicted RBP24.21■■□□□ 1.47
RFT1-202ENST00000394738 ZKSCAN1P17029 563 aaPredicted RBP24.21■■□□□ 1.47
RFT1-202ENST00000394738 MFSD6Q6ZSS7 791 aa24.21■■□□□ 1.47
RFT1-202ENST00000394738 STAG1Q8WVM7 1258 aa24.21■■□□□ 1.47
RFT1-202ENST00000394738 HERC5Q9UII4 1024 aaKnown RBP24.21■■□□□ 1.47
RFT1-202ENST00000394738 SHMT1P34896 483 aa24.2■■□□□ 1.46
RFT1-202ENST00000394738 PDE4BQ07343 736 aa24.2■■□□□ 1.46
RFT1-202ENST00000394738 RRP12Q5JTH9 1297 aaKnown RBP24.2■■□□□ 1.46
RFT1-202ENST00000394738 NKX2-3Q8TAU0 364 aa24.2■■□□□ 1.46
RFT1-202ENST00000394738 MKNK2Q9HBH9 465 aa24.2■■□□□ 1.46
RFT1-202ENST00000394738 TOMM22Q9NS69 142 aa24.2■■□□□ 1.46
RFT1-202ENST00000394738 NEDD4P46934 1319 aa24.19■■□□□ 1.46
RFT1-202ENST00000394738 TBC1D12O60347 775 aa24.19■■□□□ 1.46
RFT1-202ENST00000394738 MAP3K10Q02779 954 aa24.19■■□□□ 1.46
RFT1-202ENST00000394738 ADCK5Q3MIX3 580 aa24.19■■□□□ 1.46
RFT1-202ENST00000394738 ZNF408Q9H9D4 720 aa24.19■■□□□ 1.46
RFT1-202ENST00000394738 SWAP70Q9UH65 585 aa24.19■■□□□ 1.46
RFT1-202ENST00000394738 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.19■■□□□ 1.46
RFT1-202ENST00000394738 TOMM70O94826 608 aa24.19■■□□□ 1.46
RFT1-202ENST00000394738 HOOK2Q96ED9 719 aa24.19■■□□□ 1.46
RFT1-202ENST00000394738 ATAD5Q96QE3 1844 aa24.18■■□□□ 1.46
RFT1-202ENST00000394738 FGRP09769 529 aa24.18■■□□□ 1.46
RFT1-202ENST00000394738 TSGA10IPQ3SY00 556 aa24.18■■□□□ 1.46
RFT1-202ENST00000394738 DCAF15Q66K64 600 aa24.18■■□□□ 1.46
RFT1-202ENST00000394738 RNF41Q9H4P4 317 aaPredicted RBP24.18■■□□□ 1.46
RFT1-202ENST00000394738 NF2P35240 595 aa24.17■■□□□ 1.46
RFT1-202ENST00000394738 COL9A3Q14050 684 aaPredicted RBP24.17■■□□□ 1.46
RFT1-202ENST00000394738 RRP1BQ14684 758 aaKnown RBP24.17■■□□□ 1.46
RFT1-202ENST00000394738 TATDN1Q6P1N9 297 aa24.17■■□□□ 1.46
RFT1-202ENST00000394738 SMC1BQ8NDV3 1235 aa24.17■■□□□ 1.46
RFT1-202ENST00000394738 B4E1Z4 1266 aa24.17■■□□□ 1.46
RFT1-202ENST00000394738 RASA1P20936 1047 aa24.17■■□□□ 1.46
RFT1-202ENST00000394738 RBM25P49756 843 aaKnown RBP24.17■■□□□ 1.46
RFT1-202ENST00000394738 ORC4O43929 436 aa24.16■■□□□ 1.46
RFT1-202ENST00000394738 USP2O75604 605 aaPredicted RBP24.16■■□□□ 1.46
RFT1-202ENST00000394738 FAM47AQ5JRC9 791 aa24.16■■□□□ 1.46
RFT1-202ENST00000394738 RBM46Q8TBY0 533 aaKnown RBP24.16■■□□□ 1.46
RFT1-202ENST00000394738 TBC1D32Q96NH3 1257 aa24.16■■□□□ 1.46
RFT1-202ENST00000394738 ZNF341Q9BYN7 854 aa24.16■■□□□ 1.46
RFT1-202ENST00000394738 ZNF287Q9HBT7 754 aa24.16■■□□□ 1.46
RFT1-202ENST00000394738 OTOFQ9HC10 1997 aa24.16■■□□□ 1.46
RFT1-202ENST00000394738 PHF20L1A8MW92 1017 aa24.15■■□□□ 1.46
RFT1-202ENST00000394738 RANBP6O60518 1105 aaKnown RBP24.15■■□□□ 1.46
RFT1-202ENST00000394738 SHROOM1Q2M3G4 852 aaPredicted RBP24.15■■□□□ 1.46
RFT1-202ENST00000394738 CERKLQ49MI3 558 aaPredicted RBP24.15■■□□□ 1.46
RFT1-202ENST00000394738 MOB2Q70IA6 237 aa24.15■■□□□ 1.46
RFT1-202ENST00000394738 ZNF444Q8N0Y2 327 aaPredicted RBP24.15■■□□□ 1.46
RFT1-202ENST00000394738 PPP1R12BO60237 982 aaPredicted RBP24.14■■□□□ 1.46
RFT1-202ENST00000394738 GDF11O95390 407 aa24.14■■□□□ 1.46
RFT1-202ENST00000394738 PCP11498 1178 aaKnown RBP24.14■■□□□ 1.46
RFT1-202ENST00000394738 TRDNQ13061 729 aa24.14■■□□□ 1.46
RFT1-202ENST00000394738 TTLL12Q14166 644 aaPredicted RBP24.14■■□□□ 1.46
RFT1-202ENST00000394738 NCOA7Q8NI08 942 aa24.14■■□□□ 1.46
RFT1-202ENST00000394738 JAKMIP1Q96N16 626 aaKnown RBP24.14■■□□□ 1.46
RFT1-202ENST00000394738 KDM4AO75164 1064 aa24.14■■□□□ 1.45
RFT1-202ENST00000394738 CELF2O95319 508 aaKnown RBP24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms