RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 NEK1Q96PY6 1258 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 CRAMP1Q96RY5 1269 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 MAP7D2Q96T17 732 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 ZMYND15Q9H091 742 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 ARMT1Q9H993 441 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 DENND2AQ9ULE3 1009 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 LIMCH1Q9UPQ0 1083 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 LEMD3Q9Y2U8 911 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 COL1A1P02452 1464 aaPredicted RBP8.22□□□□□ -1.09
RTN4-205ENST00000394609 RPAP1Q9BWH6 1393 aaPredicted RBP8.22□□□□□ -1.09
RTN4-205ENST00000394609 CYP7A1P22680 504 aa8.22□□□□□ -1.09
RTN4-205ENST00000394609 KRT32Q14532 448 aa8.22□□□□□ -1.09
RTN4-205ENST00000394609 TRIM67Q6ZTA4 783 aa8.22□□□□□ -1.09
RTN4-205ENST00000394609 ADGRA1Q86SQ6 560 aa8.22□□□□□ -1.09
RTN4-205ENST00000394609 EMID1Q96A84 441 aaPredicted RBP8.22□□□□□ -1.09
RTN4-205ENST00000394609 STRBPQ96SI9 672 aaKnown RBP8.22□□□□□ -1.09
RTN4-205ENST00000394609 LRRC2Q9BYS8 371 aa8.22□□□□□ -1.09
RTN4-205ENST00000394609 IRS2Q9Y4H2 1338 aa8.22□□□□□ -1.09
RTN4-205ENST00000394609 AKAP11Q9UKA4 1901 aa8.22□□□□□ -1.09
RTN4-205ENST00000394609 GOLGB1Q14789 3259 aaKnown RBP8.21□□□□□ -1.09
RTN4-205ENST00000394609 E7EWF7 191 aa8.21□□□□□ -1.09
RTN4-205ENST00000394609 C6orf229H3BNL8 230 aa8.21□□□□□ -1.09
RTN4-205ENST00000394609 PPEF1O14829 653 aaPredicted RBP8.21□□□□□ -1.09
RTN4-205ENST00000394609 PRKAB2O43741 272 aa8.21□□□□□ -1.09
RTN4-205ENST00000394609 TRAK2O60296 914 aa8.21□□□□□ -1.09
RTN4-205ENST00000394609 LARGE1O95461 756 aa8.21□□□□□ -1.09
RTN4-205ENST00000394609 NPR1P16066 1061 aa8.21□□□□□ -1.09
RTN4-205ENST00000394609 PDE6BP35913 854 aa8.21□□□□□ -1.09
RTN4-205ENST00000394609 CUL4AQ13619 759 aa8.21□□□□□ -1.09
RTN4-205ENST00000394609 PKP1Q13835 747 aa8.21□□□□□ -1.09
RTN4-205ENST00000394609 LIAT1Q6ZQX7 453 aa8.21□□□□□ -1.09
RTN4-205ENST00000394609 METTL3Q86U44 580 aaKnown RBP8.21□□□□□ -1.09
RTN4-205ENST00000394609 ZNF622Q969S3 477 aaKnown RBP eCLIP8.21□□□□□ -1.09
RTN4-205ENST00000394609 POLLQ9UGP5 575 aa8.21□□□□□ -1.09
RTN4-205ENST00000394609 CTNNA3Q9UI47 895 aa8.21□□□□□ -1.09
RTN4-205ENST00000394609 GGA1Q9UJY5 639 aa8.21□□□□□ -1.09
RTN4-205ENST00000394609 PRDX5P30044 214 aa8.21□□□□□ -1.1
RTN4-205ENST00000394609 IMMTQ16891 758 aaKnown RBP8.21□□□□□ -1.1
RTN4-205ENST00000394609 HS1BP3Q53T59 392 aa8.21□□□□□ -1.1
RTN4-205ENST00000394609 CHST3Q7LGC8 479 aa8.21□□□□□ -1.1
RTN4-205ENST00000394609 LCORLQ8N3X6 602 aa8.21□□□□□ -1.1
RTN4-205ENST00000394609 NECAB1Q8N987 351 aa8.21□□□□□ -1.1
RTN4-205ENST00000394609 ZNF384Q8TF68 577 aa8.21□□□□□ -1.1
RTN4-205ENST00000394609 GRPEL1Q9HAV7 217 aa8.21□□□□□ -1.1
RTN4-205ENST00000394609 TNS1Q9HBL0 1735 aaKnown RBP8.21□□□□□ -1.1
RTN4-205ENST00000394609 TPCN1Q9ULQ1 816 aa8.21□□□□□ -1.1
RTN4-205ENST00000394609 ZNF213O14771 459 aa8.2□□□□□ -1.1
RTN4-205ENST00000394609 ATP2B4P23634 1241 aa8.2□□□□□ -1.1
RTN4-205ENST00000394609 CHRNA5P30532 468 aa8.2□□□□□ -1.1
RTN4-205ENST00000394609 FGD1P98174 961 aa8.2□□□□□ -1.1
RTN4-205ENST00000394609 MECOMQ03112 1051 aa8.2□□□□□ -1.1
RTN4-205ENST00000394609 TOB2Q14106 344 aaPredicted RBP8.2□□□□□ -1.1
RTN4-205ENST00000394609 ME3Q16798 604 aa8.2□□□□□ -1.1
RTN4-205ENST00000394609 NAA16Q6N069 864 aaPredicted RBP8.2□□□□□ -1.1
RTN4-205ENST00000394609 C2CD5Q86YS7 1000 aa8.2□□□□□ -1.1
RTN4-205ENST00000394609 SCUBE3Q8IX30 993 aa8.2□□□□□ -1.1
RTN4-205ENST00000394609 SP8Q8IXZ3 490 aa8.2□□□□□ -1.1
RTN4-205ENST00000394609 TBC1D16Q8TBP0 767 aa8.2□□□□□ -1.1
RTN4-205ENST00000394609 MASTLQ96GX5 879 aa8.2□□□□□ -1.1
RTN4-205ENST00000394609 CWC22Q9HCG8 908 aaKnown RBP8.2□□□□□ -1.1
RTN4-205ENST00000394609 ATP6V0A2Q9Y487 856 aa8.2□□□□□ -1.1
RTN4-205ENST00000394609 SLC4A4Q9Y6R1 1079 aa8.2□□□□□ -1.1
RTN4-205ENST00000394609 TESPA1A2RU30 521 aaPredicted RBP8.19□□□□□ -1.1
RTN4-205ENST00000394609 GSG1L2A8MUP6 293 aa8.19□□□□□ -1.1
RTN4-205ENST00000394609 PATL2C9JE40 543 aaKnown RBP8.19□□□□□ -1.1
RTN4-205ENST00000394609 ALDH1B1P30837 517 aa8.19□□□□□ -1.1
RTN4-205ENST00000394609 DYNLL1P63167 89 aaKnown RBP8.19□□□□□ -1.1
RTN4-205ENST00000394609 RAB3GAP1Q15042 981 aa8.19□□□□□ -1.1
RTN4-205ENST00000394609 GRIK5Q16478 980 aa8.19□□□□□ -1.1
RTN4-205ENST00000394609 FOXD4L5Q5VV16 416 aaPredicted RBP8.19□□□□□ -1.1
RTN4-205ENST00000394609 CLEC17AQ6ZS10 378 aa8.19□□□□□ -1.1
RTN4-205ENST00000394609 Q6ZUG5 572 aa8.19□□□□□ -1.1
RTN4-205ENST00000394609 DHX32Q7L7V1 743 aaKnown RBP8.19□□□□□ -1.1
RTN4-205ENST00000394609 ZNF804AQ7Z570 1209 aa8.19□□□□□ -1.1
RTN4-205ENST00000394609 MTERF4Q7Z6M4 381 aaKnown RBP8.19□□□□□ -1.1
RTN4-205ENST00000394609 CCDC83Q8IWF9 413 aa8.19□□□□□ -1.1
RTN4-205ENST00000394609 IFNL3Q8IZI9 196 aa8.19□□□□□ -1.1
RTN4-205ENST00000394609 TDRD7Q8NHU6 1098 aaKnown RBP8.19□□□□□ -1.1
RTN4-205ENST00000394609 FOXD4L4Q8WXT5 416 aaPredicted RBP8.19□□□□□ -1.1
RTN4-205ENST00000394609 TNPO1Q92973 898 aaKnown RBP8.19□□□□□ -1.1
RTN4-205ENST00000394609 SPSB2Q99619 263 aa8.19□□□□□ -1.1
RTN4-205ENST00000394609 EPB41L4AQ9HCS5 686 aaPredicted RBP8.19□□□□□ -1.1
RTN4-205ENST00000394609 CD209Q9NNX6 404 aa8.19□□□□□ -1.1
RTN4-205ENST00000394609 INCENPQ9NQS7 918 aa8.19□□□□□ -1.1
RTN4-205ENST00000394609 ARAP2Q8WZ64 1704 aa8.19□□□□□ -1.1
RTN4-205ENST00000394609 MAGEB6P1A0A0J9YX57 407 aa8.19□□□□□ -1.1
RTN4-205ENST00000394609 H0YIN7 160 aa8.19□□□□□ -1.1
RTN4-205ENST00000394609 HMGB1P09429 215 aaKnown RBP8.19□□□□□ -1.1
RTN4-205ENST00000394609 STK3Q13188 491 aa8.19□□□□□ -1.1
RTN4-205ENST00000394609 ANKRD1Q15327 319 aa8.19□□□□□ -1.1
RTN4-205ENST00000394609 STK11IPQ8N1F8 1099 aa8.19□□□□□ -1.1
RTN4-205ENST00000394609 SDR42E1Q8WUS8 393 aa8.19□□□□□ -1.1
RTN4-205ENST00000394609 BRF1Q92994 677 aa8.19□□□□□ -1.1
RTN4-205ENST00000394609 NSUN4Q96CB9 384 aaKnown RBP8.19□□□□□ -1.1
RTN4-205ENST00000394609 TRIM44Q96DX7 344 aaPredicted RBP8.19□□□□□ -1.1
RTN4-205ENST00000394609 INTS4Q96HW7 963 aaKnown RBP8.19□□□□□ -1.1
RTN4-205ENST00000394609 NAPBQ9H115 298 aa8.19□□□□□ -1.1
RTN4-205ENST00000394609 PODXL2Q9NZ53 605 aa8.19□□□□□ -1.1
RTN4-205ENST00000394609 TDO2P48775 406 aa8.18□□□□□ -1.1
RTN4-205ENST00000394609 EXOSC10Q01780 885 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms