RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 TMX4Q9H1E5 349 aaPredicted RBP14.11□□□□□ -0.15
SLC28A1-203ENST00000394573 TRIM10Q9UDY6 481 aa14.11□□□□□ -0.15
SLC28A1-203ENST00000394573 ANAPC4Q9UJX5 808 aa14.11□□□□□ -0.15
SLC28A1-203ENST00000394573 DIAPH2O60879 1101 aa14.11□□□□□ -0.15
SLC28A1-203ENST00000394573 MYL1P05976 194 aa14.11□□□□□ -0.15
SLC28A1-203ENST00000394573 EPN3Q9H201 632 aa14.11□□□□□ -0.15
SLC28A1-203ENST00000394573 C15orf41Q9Y2V0 281 aa14.11□□□□□ -0.15
SLC28A1-203ENST00000394573 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.11□□□□□ -0.15
SLC28A1-203ENST00000394573 FESP07332 822 aa14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 TBX2Q13207 712 aaPredicted RBP14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 PLCB4Q15147 1175 aa14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 SPECC1LQ69YQ0 1117 aa14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 ATL3Q6DD88 541 aa14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 ARHGAP22Q7Z5H3 698 aa14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 YTHDF3Q7Z739 585 aaKnown RBP14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 PNMA8AQ86V59 439 aaPredicted RBP14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 TRMT44Q8IYL2 757 aaKnown RBP14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 ACSBG1Q96GR2 724 aa14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 IFT140Q96RY7 1462 aa14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 ADGRL3Q9HAR2 1447 aa14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 AHCYL1O43865 530 aa14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 RNF8O76064 485 aa14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 CLTAP09496 248 aa14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 MAGEA8P43361 318 aa14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 NECTIN1Q15223 517 aa14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 RRP12Q5JTH9 1297 aaKnown RBP14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 AKNAD1Q5T1N1 836 aa14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 MEX3CQ5U5Q3 659 aaKnown RBP14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 SPATS2Q86XZ4 545 aaKnown RBP14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 TSEN2Q8NCE0 465 aaKnown RBP14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 FAM81AQ8TBF8 368 aa14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 RUFY1Q96T51 708 aa14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 TFR2Q9UP52 801 aa14.1□□□□□ -0.15
SLC28A1-203ENST00000394573 ATP5JP18859 108 aa14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 CTCFP49711 727 aaPredicted RBP14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 PPP1R7Q15435 360 aa14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 EZH2Q15910 746 aaKnown RBP14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 MSL1Q68DK7 614 aa14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 TM6SF1Q9BZW5 370 aa14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 TRIM4Q9C037 500 aa14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 IQGAP2Q13576 1575 aa14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 HECW2Q9P2P5 1572 aa14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 CDK12Q9NYV4 1490 aaPredicted RBP14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 ERICH2A1L162 156 aa14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 PLEKHD1A6NEE1 506 aa14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 IKBKBO14920 756 aa14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 SURF6O75683 361 aaKnown RBP14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 SETSIPP0DME0 302 aa14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 POLD1P28340 1107 aa14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 SCTRP47872 440 aa14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 NNTQ13423 1086 aa14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 PNOCQ13519 176 aa14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 ANKRD20A8PQ5CZ79 823 aa14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 OTUD7BQ6GQQ9 843 aa14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 SYCP3Q8IZU3 236 aa14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 CUL5Q93034 780 aa14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 CCDC47Q96A33 483 aaKnown RBP14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 FAM227BQ96M60 508 aa14.09□□□□□ -0.15
SLC28A1-203ENST00000394573 GOLGA8KD6RF30 607 aa14.08□□□□□ -0.16
SLC28A1-203ENST00000394573 SLC27A2O14975 620 aa14.08□□□□□ -0.16
SLC28A1-203ENST00000394573 TUBBP07437 444 aa14.08□□□□□ -0.16
SLC28A1-203ENST00000394573 PTGISQ16647 500 aa14.08□□□□□ -0.16
SLC28A1-203ENST00000394573 PPP1R15BQ5SWA1 713 aa14.08□□□□□ -0.16
SLC28A1-203ENST00000394573 CCNI2Q6ZMN8 369 aaPredicted RBP14.08□□□□□ -0.16
SLC28A1-203ENST00000394573 USHBP1Q8N6Y0 703 aa14.08□□□□□ -0.16
SLC28A1-203ENST00000394573 MAGEC3Q8TD91 643 aa14.08□□□□□ -0.16
SLC28A1-203ENST00000394573 HDAC7Q8WUI4 952 aa14.08□□□□□ -0.16
SLC28A1-203ENST00000394573 ZNF396Q96N95 335 aaPredicted RBP14.08□□□□□ -0.16
SLC28A1-203ENST00000394573 MMADHCQ9H3L0 296 aaPredicted RBP14.08□□□□□ -0.16
SLC28A1-203ENST00000394573 LRRC7Q96NW7 1537 aa14.08□□□□□ -0.16
SLC28A1-203ENST00000394573 ATP6V1G1O75348 118 aa14.08□□□□□ -0.16
SLC28A1-203ENST00000394573 POLR3DP05423 398 aaPredicted RBP14.08□□□□□ -0.16
SLC28A1-203ENST00000394573 ATP4AP20648 1035 aa14.08□□□□□ -0.16
SLC28A1-203ENST00000394573 ELF3P78545 371 aaPredicted RBP14.08□□□□□ -0.16
SLC28A1-203ENST00000394573 PDE4BQ07343 736 aa14.08□□□□□ -0.16
SLC28A1-203ENST00000394573 CORO1CQ9ULV4 474 aaPredicted RBP14.08□□□□□ -0.16
SLC28A1-203ENST00000394573 CLIC4Q9Y696 253 aa14.08□□□□□ -0.16
SLC28A1-203ENST00000394573 TARBP1Q13395 1621 aaKnown RBP14.08□□□□□ -0.16
SLC28A1-203ENST00000394573 IMPDH2P12268 514 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 CDC27P30260 824 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 HPDP32754 393 aaPredicted RBP14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 SKOR1P84550 965 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 C2orf54Q08AI8 447 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 STK38Q15208 465 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 MFN1Q8IWA4 741 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 OSBPL9Q96SU4 736 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 GUCA1BQ9UMX6 200 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 COL3A1P02461 1466 aaPredicted RBP14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 NRXN1Q9ULB1 1477 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 PES1O00541 588 aaKnown RBP14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 ZNF185O15231 689 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 PPP1R37O75864 691 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 RPS6KB1P23443 525 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 ABL2P42684 1182 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 AMPHP49418 695 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 SLC7A5Q01650 507 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 QPCTQ16769 361 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 LRRC23Q53EV4 343 aaPredicted RBP14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 ILDR1Q86SU0 546 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms