RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 CEP131Q9UPN4 1083 aa12.06□□□□□ -0.48
ACTN1-203ENST00000394419 SMIM22K7EJ46 135 aa12.05□□□□□ -0.48
ACTN1-203ENST00000394419 ZSCAN12O43309 604 aa12.05□□□□□ -0.48
ACTN1-203ENST00000394419 CTIFO43310 598 aaKnown RBP12.05□□□□□ -0.48
ACTN1-203ENST00000394419 CYP19A1P11511 503 aaPredicted RBP12.05□□□□□ -0.48
ACTN1-203ENST00000394419 NLRP5P59047 1200 aa12.05□□□□□ -0.48
ACTN1-203ENST00000394419 CCP110O43303 1012 aa12.05□□□□□ -0.48
ACTN1-203ENST00000394419 TPM1P09493 284 aa12.05□□□□□ -0.48
ACTN1-203ENST00000394419 CASQ1P31415 396 aa12.05□□□□□ -0.48
ACTN1-203ENST00000394419 DYNLL1P63167 89 aaKnown RBP12.05□□□□□ -0.48
ACTN1-203ENST00000394419 FBXO38Q6PIJ6 1188 aa12.05□□□□□ -0.48
ACTN1-203ENST00000394419 PLIN2Q99541 437 aa12.05□□□□□ -0.48
ACTN1-203ENST00000394419 BAG1Q99933 345 aaPredicted RBP12.05□□□□□ -0.48
ACTN1-203ENST00000394419 TNKSO95271 1327 aa12.05□□□□□ -0.48
ACTN1-203ENST00000394419 MROH5Q6ZUA9 1318 aa12.05□□□□□ -0.48
ACTN1-203ENST00000394419 SLIT3O75094 1523 aa12.05□□□□□ -0.48
ACTN1-203ENST00000394419 MARF1Q9Y4F3 1742 aaKnown RBP12.05□□□□□ -0.48
ACTN1-203ENST00000394419 FAM205CA6NFA0 338 aa12.05□□□□□ -0.48
ACTN1-203ENST00000394419 GSG1L2A8MUP6 293 aa12.05□□□□□ -0.48
ACTN1-203ENST00000394419 DEXIO95424 95 aa12.05□□□□□ -0.48
ACTN1-203ENST00000394419 PRR29P0C7W0 189 aa12.05□□□□□ -0.48
ACTN1-203ENST00000394419 CCT6AP40227 531 aaKnown RBP12.05□□□□□ -0.48
ACTN1-203ENST00000394419 PPARAQ07869 468 aa12.05□□□□□ -0.48
ACTN1-203ENST00000394419 RILPL1Q5EBL4 403 aa12.05□□□□□ -0.48
ACTN1-203ENST00000394419 FAM47AQ5JRC9 791 aa12.05□□□□□ -0.48
ACTN1-203ENST00000394419 METTL16Q86W50 562 aaKnown RBP12.05□□□□□ -0.48
ACTN1-203ENST00000394419 ANKRD7Q92527 254 aa12.05□□□□□ -0.48
ACTN1-203ENST00000394419 FEZ1Q99689 392 aa12.05□□□□□ -0.48
ACTN1-203ENST00000394419 SAMSN1Q9NSI8 373 aaKnown RBP12.05□□□□□ -0.48
ACTN1-203ENST00000394419 WTIPA6NIX2 430 aaPredicted RBP12.04□□□□□ -0.48
ACTN1-203ENST00000394419 CHRNDQ07001 517 aa12.04□□□□□ -0.48
ACTN1-203ENST00000394419 PDE4BQ07343 736 aa12.04□□□□□ -0.48
ACTN1-203ENST00000394419 DHX8Q14562 1220 aaKnown RBP12.04□□□□□ -0.48
ACTN1-203ENST00000394419 KMT5BQ4FZB7 885 aa12.04□□□□□ -0.48
ACTN1-203ENST00000394419 FILIP1LQ4L180 1135 aa12.04□□□□□ -0.48
ACTN1-203ENST00000394419 KRT222Q8N1A0 295 aa12.04□□□□□ -0.48
ACTN1-203ENST00000394419 CCDC12Q8WUD4 166 aaPredicted RBP12.04□□□□□ -0.48
ACTN1-203ENST00000394419 EPSTI1Q96J88 318 aa12.04□□□□□ -0.48
ACTN1-203ENST00000394419 CSRNP2Q9H175 543 aa12.04□□□□□ -0.48
ACTN1-203ENST00000394419 EPC1Q9H2F5 836 aa12.04□□□□□ -0.48
ACTN1-203ENST00000394419 TFCP2L1Q9NZI6 479 aa12.04□□□□□ -0.48
ACTN1-203ENST00000394419 PPP6R2O75170 966 aa12.04□□□□□ -0.48
ACTN1-203ENST00000394419 TMCO3Q6UWJ1 677 aa12.04□□□□□ -0.48
ACTN1-203ENST00000394419 CTCFLQ8NI51 663 aaPredicted RBP12.04□□□□□ -0.48
ACTN1-203ENST00000394419 BLZF1Q9H2G9 400 aa12.04□□□□□ -0.48
ACTN1-203ENST00000394419 AFDNP55196 1824 aaKnown RBP12.03□□□□□ -0.48
ACTN1-203ENST00000394419 MCM7P33993 719 aa12.03□□□□□ -0.48
ACTN1-203ENST00000394419 ETF1P62495 437 aaKnown RBP12.03□□□□□ -0.48
ACTN1-203ENST00000394419 ANKRD18AQ8IVF6 992 aa12.03□□□□□ -0.48
ACTN1-203ENST00000394419 PCMTD1Q96MG8 357 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-203ENST00000394419 TSPY2A6NKD2 308 aa12.03□□□□□ -0.48
ACTN1-203ENST00000394419 MMP1P03956 469 aa12.03□□□□□ -0.48
ACTN1-203ENST00000394419 CDC25AP30304 524 aa12.03□□□□□ -0.48
ACTN1-203ENST00000394419 DDB1Q16531 1140 aa12.03□□□□□ -0.48
ACTN1-203ENST00000394419 FOXP4Q8IVH2 680 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-203ENST00000394419 EEF2KMTQ96G04 330 aa12.03□□□□□ -0.48
ACTN1-203ENST00000394419 OSBPL5Q9H0X9 879 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-203ENST00000394419 MAN1B1Q9UKM7 699 aa12.03□□□□□ -0.48
ACTN1-203ENST00000394419 FMNL1O95466 1100 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-203ENST00000394419 IFNAR1P17181 557 aa12.03□□□□□ -0.48
ACTN1-203ENST00000394419 EVCP57679 992 aa12.03□□□□□ -0.48
ACTN1-203ENST00000394419 NCAPHQ15003 741 aa12.03□□□□□ -0.48
ACTN1-203ENST00000394419 RESP18Q5W5W9 173 aa12.03□□□□□ -0.48
ACTN1-203ENST00000394419 TMTC2Q8N394 836 aa12.03□□□□□ -0.48
ACTN1-203ENST00000394419 SLC4A9Q96Q91 983 aa12.03□□□□□ -0.48
ACTN1-203ENST00000394419 CDC5LQ99459 802 aaKnown RBP12.03□□□□□ -0.48
ACTN1-203ENST00000394419 AATFQ9NY61 560 aaKnown RBP eCLIP12.03□□□□□ -0.48
ACTN1-203ENST00000394419 USP17L12C9JPN9 530 aa12.02□□□□□ -0.48
ACTN1-203ENST00000394419 USP17L21D6R901 530 aa12.02□□□□□ -0.48
ACTN1-203ENST00000394419 LRRN4CLQ8ND94 238 aa12.02□□□□□ -0.48
ACTN1-203ENST00000394419 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.02□□□□□ -0.484e-9■■□□□ 14.3
ACTN1-203ENST00000394419 CPDO75976 1380 aa12.02□□□□□ -0.48
ACTN1-203ENST00000394419 ZSCAN20P17040 1043 aaPredicted RBP12.02□□□□□ -0.49
ACTN1-203ENST00000394419 CRKLP46109 303 aaKnown RBP12.02□□□□□ -0.49
ACTN1-203ENST00000394419 NKX1-1Q15270 411 aaPredicted RBP12.02□□□□□ -0.49
ACTN1-203ENST00000394419 PIK3AP1Q6ZUJ8 805 aa12.02□□□□□ -0.49
ACTN1-203ENST00000394419 NYAP1Q6ZVC0 841 aa12.02□□□□□ -0.49
ACTN1-203ENST00000394419 CRACR2BQ8N4Y2 399 aaPredicted RBP12.02□□□□□ -0.49
ACTN1-203ENST00000394419 PRDM4Q9UKN5 801 aa12.02□□□□□ -0.49
ACTN1-203ENST00000394419 IKBKBO14920 756 aa12.02□□□□□ -0.49
ACTN1-203ENST00000394419 GNAT2P19087 354 aa12.02□□□□□ -0.49
ACTN1-203ENST00000394419 KRT2P35908 639 aa12.02□□□□□ -0.49
ACTN1-203ENST00000394419 LIFRP42702 1097 aa12.02□□□□□ -0.49
ACTN1-203ENST00000394419 PTPAQ15257 358 aa12.02□□□□□ -0.49
ACTN1-203ENST00000394419 RRAGBQ5VZM2 374 aa12.02□□□□□ -0.49
ACTN1-203ENST00000394419 TRERF1Q96PN7 1200 aa12.02□□□□□ -0.49
ACTN1-203ENST00000394419 VPS16Q9H269 839 aa12.02□□□□□ -0.49
ACTN1-203ENST00000394419 ST7Q9NRC1 585 aa12.02□□□□□ -0.49
ACTN1-203ENST00000394419 CCDC87Q9NVE4 849 aa12.02□□□□□ -0.49
ACTN1-203ENST00000394419 C5P01031 1676 aa12.01□□□□□ -0.49
ACTN1-203ENST00000394419 TULP1O00294 542 aaPredicted RBP12.01□□□□□ -0.49
ACTN1-203ENST00000394419 N4BP3O15049 544 aa12.01□□□□□ -0.49
ACTN1-203ENST00000394419 PLEKHA8P1O95397 391 aa12.01□□□□□ -0.49
ACTN1-203ENST00000394419 ANKRD20A12PQ8NF67 263 aa12.01□□□□□ -0.49
ACTN1-203ENST00000394419 PLA2G12BQ9BX93 195 aa12.01□□□□□ -0.49
ACTN1-203ENST00000394419 PUF60Q9UHX1 559 aaKnown RBP12.01□□□□□ -0.49
ACTN1-203ENST00000394419 RAD21O60216 631 aa12.01□□□□□ -0.49
ACTN1-203ENST00000394419 FMR1Q06787 632 aaKnown RBP eCLIP12.01□□□□□ -0.494e-6■■■□□ 17.6
ACTN1-203ENST00000394419 KIF4BQ2VIQ3 1234 aa12.01□□□□□ -0.49
ACTN1-203ENST00000394419 SPECC1LQ69YQ0 1117 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms