RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 KIAA1551Q9HCM1 1747 aa22.28■■□□□ 1.16
CLDND1-203ENST00000394181 ERICH2A1L162 156 aa22.27■■□□□ 1.16
CLDND1-203ENST00000394181 PLCD1P51178 756 aa22.27■■□□□ 1.16
CLDND1-203ENST00000394181 CMTR1Q8N1G2 835 aaKnown RBP22.27■■□□□ 1.16
CLDND1-203ENST00000394181 CNKSR1Q969H4 720 aa22.27■■□□□ 1.16
CLDND1-203ENST00000394181 CHMP4CQ96CF2 233 aa22.27■■□□□ 1.16
CLDND1-203ENST00000394181 FSD2A1L4K1 749 aa22.26■■□□□ 1.15
CLDND1-203ENST00000394181 G3V3G9 751 aa22.26■■□□□ 1.15
CLDND1-203ENST00000394181 ZSCAN23Q3MJ62 389 aa22.26■■□□□ 1.15
CLDND1-203ENST00000394181 DCAF8Q5TAQ9 597 aa22.26■■□□□ 1.15
CLDND1-203ENST00000394181 TTC6Q86TZ1 520 aa22.26■■□□□ 1.15
CLDND1-203ENST00000394181 FAM163AQ96GL9 167 aaPredicted RBP22.26■■□□□ 1.15
CLDND1-203ENST00000394181 KIF3AQ9Y496 699 aa22.26■■□□□ 1.15
CLDND1-203ENST00000394181 DAGLAQ9Y4D2 1042 aa22.26■■□□□ 1.15
CLDND1-203ENST00000394181 GAKO14976 1311 aa22.26■■□□□ 1.15
CLDND1-203ENST00000394181 ORC4O43929 436 aa22.26■■□□□ 1.15
CLDND1-203ENST00000394181 SCNN1DP51172 638 aa22.26■■□□□ 1.15
CLDND1-203ENST00000394181 ILDR1Q86SU0 546 aaPredicted RBP22.26■■□□□ 1.15
CLDND1-203ENST00000394181 TEX11Q8IYF3 940 aa22.26■■□□□ 1.15
CLDND1-203ENST00000394181 QSER1Q2KHR3 1735 aa22.26■■□□□ 1.15
CLDND1-203ENST00000394181 ZNF654Q8IZM8 581 aa22.25■■□□□ 1.15
CLDND1-203ENST00000394181 SLC44A5Q8NCS7 719 aa22.25■■□□□ 1.15
CLDND1-203ENST00000394181 NUP133Q8WUM0 1156 aa22.25■■□□□ 1.15
CLDND1-203ENST00000394181 EYA3Q99504 573 aa22.25■■□□□ 1.15
CLDND1-203ENST00000394181 C21orf2O43822 256 aa22.25■■□□□ 1.15
CLDND1-203ENST00000394181 KRT85P78386 507 aa22.25■■□□□ 1.15
CLDND1-203ENST00000394181 CCDC82Q8N4S0 544 aa22.25■■□□□ 1.15
CLDND1-203ENST00000394181 C8orf76Q96K31 380 aa22.25■■□□□ 1.15
CLDND1-203ENST00000394181 TTF2Q9UNY4 1162 aaKnown RBP22.25■■□□□ 1.15
CLDND1-203ENST00000394181 MBD3O95983 291 aa22.24■■□□□ 1.15
CLDND1-203ENST00000394181 SYNE3Q6ZMZ3 975 aa22.24■■□□□ 1.15
CLDND1-203ENST00000394181 MTA3Q9BTC8 594 aa22.24■■□□□ 1.15
CLDND1-203ENST00000394181 FTOQ9C0B1 505 aaKnown RBP eCLIP22.24■■□□□ 1.15
CLDND1-203ENST00000394181 PCP11498 1178 aaKnown RBP22.23■■□□□ 1.15
CLDND1-203ENST00000394181 TMTC2Q8N394 836 aa22.23■■□□□ 1.15
CLDND1-203ENST00000394181 FBXO18Q8NFZ0 1043 aa22.23■■□□□ 1.15
CLDND1-203ENST00000394181 ZSCAN16Q9H4T2 348 aaPredicted RBP22.23■■□□□ 1.15
CLDND1-203ENST00000394181 GOLGA6L3A6NEY3 463 aa22.23■■□□□ 1.15
CLDND1-203ENST00000394181 PDE4BQ07343 736 aa22.23■■□□□ 1.15
CLDND1-203ENST00000394181 AOC3Q16853 763 aa22.23■■□□□ 1.15
CLDND1-203ENST00000394181 FLT1P17948 1338 aa22.23■■□□□ 1.15
CLDND1-203ENST00000394181 SLC3A2P08195 630 aaKnown RBP22.22■■□□□ 1.15
CLDND1-203ENST00000394181 UBE2HP62256 183 aa22.22■■□□□ 1.15
CLDND1-203ENST00000394181 CEBPZQ03701 1054 aaKnown RBP22.22■■□□□ 1.15
CLDND1-203ENST00000394181 RTN1Q16799 776 aa22.22■■□□□ 1.15
CLDND1-203ENST00000394181 FANCBQ8NB91 859 aa22.22■■□□□ 1.15
CLDND1-203ENST00000394181 POLR3DP05423 398 aaPredicted RBP22.22■■□□□ 1.15
CLDND1-203ENST00000394181 KCNA3P22001 575 aa22.22■■□□□ 1.15
CLDND1-203ENST00000394181 GUCY1A2P33402 732 aa22.22■■□□□ 1.15
CLDND1-203ENST00000394181 IARSP41252 1262 aaKnown RBP22.22■■□□□ 1.15
CLDND1-203ENST00000394181 IFIT1BQ5T764 474 aaKnown RBP22.22■■□□□ 1.15
CLDND1-203ENST00000394181 IQCA1Q86XH1 822 aa22.22■■□□□ 1.15
CLDND1-203ENST00000394181 SLF2Q8IX21 1173 aa22.22■■□□□ 1.15
CLDND1-203ENST00000394181 LEO1Q8WVC0 666 aaPredicted RBP22.22■■□□□ 1.15
CLDND1-203ENST00000394181 ALG1Q9BT22 464 aa22.22■■□□□ 1.15
CLDND1-203ENST00000394181 SLC26A6Q9BXS9 759 aa22.22■■□□□ 1.15
CLDND1-203ENST00000394181 C10orf71Q711Q0 1435 aa22.21■■□□□ 1.15
CLDND1-203ENST00000394181 LAMB1P07942 1786 aa22.21■■□□□ 1.15
CLDND1-203ENST00000394181 ECE2O60344 883 aa22.21■■□□□ 1.15
CLDND1-203ENST00000394181 ZBTB7AO95365 584 aa22.21■■□□□ 1.15
CLDND1-203ENST00000394181 PODNQ7Z5L7 613 aa22.21■■□□□ 1.15
CLDND1-203ENST00000394181 PCDHAC2Q9Y5I4 1007 aa22.21■■□□□ 1.15
CLDND1-203ENST00000394181 SNED1Q8TER0 1413 aa22.21■■□□□ 1.15
CLDND1-203ENST00000394181 CDKL5O76039 1030 aa22.21■■□□□ 1.15
CLDND1-203ENST00000394181 DPEP1P16444 411 aa22.21■■□□□ 1.15
CLDND1-203ENST00000394181 TFAP4Q01664 338 aa22.21■■□□□ 1.15
CLDND1-203ENST00000394181 IL17RBQ9NRM6 502 aa22.21■■□□□ 1.15
CLDND1-203ENST00000394181 NID2Q14112 1375 aa22.21■■□□□ 1.15
CLDND1-203ENST00000394181 TSPY2A6NKD2 308 aa22.2■■□□□ 1.14
CLDND1-203ENST00000394181 CPLX2Q6PUV4 134 aaKnown RBP22.2■■□□□ 1.14
CLDND1-203ENST00000394181 NBPF11Q86T75 865 aa22.2■■□□□ 1.14
CLDND1-203ENST00000394181 SUGT1Q9Y2Z0 365 aa22.2■■□□□ 1.14
CLDND1-203ENST00000394181 KIF28PB7ZC32 967 aa22.19■■□□□ 1.14
CLDND1-203ENST00000394181 IFNAR1P17181 557 aa22.19■■□□□ 1.14
CLDND1-203ENST00000394181 SPATA32Q96LK8 384 aa22.19■■□□□ 1.14
CLDND1-203ENST00000394181 PLCG2P16885 1265 aa22.19■■□□□ 1.14
CLDND1-203ENST00000394181 PICALMQ13492 652 aa22.19■■□□□ 1.14
CLDND1-203ENST00000394181 RCSD1Q6JBY9 416 aa22.19■■□□□ 1.14
CLDND1-203ENST00000394181 KIAA0825Q8IV33 1275 aa22.19■■□□□ 1.14
CLDND1-203ENST00000394181 MKNK2Q9HBH9 465 aa22.19■■□□□ 1.14
CLDND1-203ENST00000394181 CDK5RAP2Q96SN8 1893 aa22.18■■□□□ 1.14
CLDND1-203ENST00000394181 SYCE3A1L190 88 aa22.18■■□□□ 1.14
CLDND1-203ENST00000394181 USP17L3A6NCW0 530 aa22.18■■□□□ 1.14
CLDND1-203ENST00000394181 USP17L4A6NCW7 530 aa22.18■■□□□ 1.14
CLDND1-203ENST00000394181 FMNL1O95466 1100 aaPredicted RBP22.18■■□□□ 1.14
CLDND1-203ENST00000394181 SSRP1Q08945 709 aaKnown RBP22.18■■□□□ 1.14
CLDND1-203ENST00000394181 TROAPQ12815 778 aa22.18■■□□□ 1.14
CLDND1-203ENST00000394181 USP17L1Q7RTZ2 530 aa22.18■■□□□ 1.14
CLDND1-203ENST00000394181 CRACR2BQ8N4Y2 399 aaPredicted RBP22.18■■□□□ 1.14
CLDND1-203ENST00000394181 SCAND2PQ9GZW5 306 aaPredicted RBP22.18■■□□□ 1.14
CLDND1-203ENST00000394181 DDX4Q9NQI0 724 aaKnown RBP22.18■■□□□ 1.14
CLDND1-203ENST00000394181 ROBO3Q96MS0 1386 aa22.18■■□□□ 1.14
CLDND1-203ENST00000394181 XRCC6P12956 609 aaKnown RBP eCLIP22.18■■□□□ 1.14
CLDND1-203ENST00000394181 ZNF445P59923 1031 aa22.18■■□□□ 1.14
CLDND1-203ENST00000394181 CSPP1Q1MSJ5 1256 aa22.18■■□□□ 1.14
CLDND1-203ENST00000394181 DACT2Q5SW24 774 aa22.18■■□□□ 1.14
CLDND1-203ENST00000394181 CERS3Q8IU89 383 aa22.18■■□□□ 1.14
CLDND1-203ENST00000394181 TTLL6Q8N841 843 aa22.18■■□□□ 1.14
CLDND1-203ENST00000394181 USP28Q96RU2 1077 aa22.18■■□□□ 1.14
CLDND1-203ENST00000394181 ATF5Q9Y2D1 282 aaPredicted RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms