RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 HOXA7P31268 230 aaPredicted RBP9.69□□□□□ -0.86
GABRA1-202ENST00000393943 IGHMBP2P38935 993 aaKnown RBP9.69□□□□□ -0.86
GABRA1-202ENST00000393943 PAK2Q13177 524 aa9.69□□□□□ -0.86
GABRA1-202ENST00000393943 HLTFQ14527 1009 aaKnown RBP eCLIP9.69□□□□□ -0.86
GABRA1-202ENST00000393943 LDHAL6AQ6ZMR3 332 aa9.69□□□□□ -0.86
GABRA1-202ENST00000393943 ELOA2Q8IYF1 753 aaPredicted RBP9.69□□□□□ -0.86
GABRA1-202ENST00000393943 LMBR1Q8WVP7 490 aa9.69□□□□□ -0.86
GABRA1-202ENST00000393943 HNRNPLLQ8WVV9 542 aaKnown RBP9.69□□□□□ -0.86
GABRA1-202ENST00000393943 MRFAP1Q9Y605 127 aa9.69□□□□□ -0.86
GABRA1-202ENST00000393943 IFT172Q9UG01 1749 aa9.69□□□□□ -0.86
GABRA1-202ENST00000393943 EVA1CP58658 441 aa9.69□□□□□ -0.86
GABRA1-202ENST00000393943 KIF23Q02241 960 aaPredicted RBP9.69□□□□□ -0.86
GABRA1-202ENST00000393943 TDRD12Q587J7 1177 aaKnown RBP9.69□□□□□ -0.86
GABRA1-202ENST00000393943 SLC9C2Q5TAH2 1124 aa9.69□□□□□ -0.86
GABRA1-202ENST00000393943 ZNF790Q6PG37 636 aa9.69□□□□□ -0.86
GABRA1-202ENST00000393943 RUFY4Q6ZNE9 571 aa9.69□□□□□ -0.86
GABRA1-202ENST00000393943 SECISBP2LQ93073 1101 aaKnown RBP9.69□□□□□ -0.86
GABRA1-202ENST00000393943 DCAF5Q96JK2 942 aa9.69□□□□□ -0.86
GABRA1-202ENST00000393943 VIPAS39Q9H9C1 493 aa9.69□□□□□ -0.86
GABRA1-202ENST00000393943 CLIC4Q9Y696 253 aa9.69□□□□□ -0.86
GABRA1-202ENST00000393943 NRKQ7Z2Y5 1582 aa9.69□□□□□ -0.86
GABRA1-202ENST00000393943 SEC31AO94979 1220 aaKnown RBP9.69□□□□□ -0.86
GABRA1-202ENST00000393943 E4F1Q66K89 784 aaPredicted RBP9.69□□□□□ -0.86
GABRA1-202ENST00000393943 LRRC45Q96CN5 670 aa9.69□□□□□ -0.86
GABRA1-202ENST00000393943 NUCKS1Q9H1E3 243 aaKnown RBP9.69□□□□□ -0.86
GABRA1-202ENST00000393943 USP27XA6NNY8 438 aa9.68□□□□□ -0.86
GABRA1-202ENST00000393943 ATP5J2-PTCD1G3V325 749 aa9.68□□□□□ -0.86
GABRA1-202ENST00000393943 PTCD1O75127 700 aaKnown RBP9.68□□□□□ -0.86
GABRA1-202ENST00000393943 ADKP55263 362 aaKnown RBP9.68□□□□□ -0.86
GABRA1-202ENST00000393943 HSP90AA4PQ58FG1 418 aa9.68□□□□□ -0.86
GABRA1-202ENST00000393943 CHST3Q7LGC8 479 aa9.68□□□□□ -0.86
GABRA1-202ENST00000393943 FMNL3Q8IVF7 1028 aa9.68□□□□□ -0.86
GABRA1-202ENST00000393943 ATG3Q9NT62 314 aa9.68□□□□□ -0.86
GABRA1-202ENST00000393943 CIAO1O76071 339 aa9.68□□□□□ -0.86
GABRA1-202ENST00000393943 TCP1P17987 556 aaKnown RBP9.68□□□□□ -0.86
GABRA1-202ENST00000393943 PRPHP41219 470 aa9.68□□□□□ -0.86
GABRA1-202ENST00000393943 RETREG2Q8NC44 543 aa9.68□□□□□ -0.86
GABRA1-202ENST00000393943 ATRIPQ8WXE1 791 aa9.68□□□□□ -0.86
GABRA1-202ENST00000393943 CAPS2Q9BXY5 557 aa9.68□□□□□ -0.86
GABRA1-202ENST00000393943 FOXP1Q9H334 677 aaPredicted RBP9.68□□□□□ -0.86
GABRA1-202ENST00000393943 PCDHA5Q9Y5H7 936 aa9.68□□□□□ -0.86
GABRA1-202ENST00000393943 NCKAP5LQ9HCH0 1330 aa9.68□□□□□ -0.86
GABRA1-202ENST00000393943 PPP1R12BO60237 982 aaPredicted RBP9.68□□□□□ -0.86
GABRA1-202ENST00000393943 C8orf74Q6P047 294 aa9.68□□□□□ -0.86
GABRA1-202ENST00000393943 MMS22LQ6ZRQ5 1243 aa9.68□□□□□ -0.86
GABRA1-202ENST00000393943 ZNF589Q86UQ0 364 aaPredicted RBP9.68□□□□□ -0.86
GABRA1-202ENST00000393943 RSRC1Q96IZ7 334 aaKnown RBP9.68□□□□□ -0.86
GABRA1-202ENST00000393943 CCDC114Q96M63 670 aa9.68□□□□□ -0.86
GABRA1-202ENST00000393943 FAM204AQ9H8W3 233 aa9.68□□□□□ -0.86
GABRA1-202ENST00000393943 SNRKQ9NRH2 765 aa9.68□□□□□ -0.86
GABRA1-202ENST00000393943 MED23Q9ULK4 1368 aa9.68□□□□□ -0.86
GABRA1-202ENST00000393943 H7C1D1 291 aa9.68□□□□□ -0.86
GABRA1-202ENST00000393943 CLGNO14967 610 aa9.68□□□□□ -0.86
GABRA1-202ENST00000393943 GBP2P32456 591 aaPredicted RBP9.68□□□□□ -0.86
GABRA1-202ENST00000393943 JARID2Q92833 1246 aaPredicted RBP9.68□□□□□ -0.86
GABRA1-202ENST00000393943 KIDINS220Q9ULH0 1771 aa9.68□□□□□ -0.86
GABRA1-202ENST00000393943 GPAA1O43292 621 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 KRT18P05783 430 aaKnown RBP9.67□□□□□ -0.86
GABRA1-202ENST00000393943 SEMA3FQ13275 785 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 CASP8Q14790 479 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 MSL1Q68DK7 614 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 ANKRD18AQ8IVF6 992 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 FNBP4Q8N3X1 1017 aaPredicted RBP9.67□□□□□ -0.86
GABRA1-202ENST00000393943 DRC1Q96MC2 740 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 MROH1Q8NDA8 1641 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 MAP2K1Q02750 393 aaPredicted RBP9.67□□□□□ -0.86
GABRA1-202ENST00000393943 MTMR3Q13615 1198 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 ARID5BQ14865 1188 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 CLUL1Q15846 466 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 ARMCX5Q6P1M9 558 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 SRLQ86TD4 932 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 ZNF579Q8NAF0 562 aaKnown RBP9.67□□□□□ -0.86
GABRA1-202ENST00000393943 DDX12PQ92771 950 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 RNF14Q9UBS8 474 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 DBNLQ9UJU6 430 aaKnown RBP9.67□□□□□ -0.86
GABRA1-202ENST00000393943 CTNND2Q9UQB3 1225 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 PTPRUQ92729 1446 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 PPFIA3O75145 1194 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 DNM2P50570 870 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 STX17P56962 302 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 MAP3K9P80192 1104 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 CCDC84Q86UT8 332 aaPredicted RBP9.67□□□□□ -0.86
GABRA1-202ENST00000393943 ANKARQ7Z5J8 1434 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 RNF40O75150 1001 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 RESP18Q5W5W9 173 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 MCTP2Q6DN12 878 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 ARMC9Q7Z3E5 817 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 GOLPH3LQ9H4A5 285 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 RNF216Q9NWF9 866 aaPredicted RBP9.67□□□□□ -0.86
GABRA1-202ENST00000393943 SERTAD1Q9UHV2 236 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 FAN1Q9Y2M0 1017 aa9.67□□□□□ -0.86
GABRA1-202ENST00000393943 PIK3C2BO00750 1634 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 SASH1O94885 1247 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 CCDC172P0C7W6 258 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 NAA30Q147X3 362 aaPredicted RBP9.66□□□□□ -0.86
GABRA1-202ENST00000393943 IFIT1BQ5T764 474 aaKnown RBP9.66□□□□□ -0.86
GABRA1-202ENST00000393943 RAB11FIP4Q86YS3 637 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 CAPZA3Q96KX2 299 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 MAP2P11137 1827 aaKnown RBP9.66□□□□□ -0.86
GABRA1-202ENST00000393943 METP08581 1390 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms