RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 SLC1A4P43007 532 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 POLA2Q14181 598 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 CCDC174Q6PII3 467 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 CCDC144CPQ8IYA2 1237 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 SYCP3Q8IZU3 236 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 CAGE1Q8TC20 777 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 KDM2BQ8NHM5 1336 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 ABCC6O95255 1503 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 NEMFO60524 1076 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 CKAP2LQ8IYA6 745 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 PUS3Q9BZE2 481 aaKnown RBP9.22□□□□□ -0.93
ATXN3-203ENST00000393287 FMN2Q9NZ56 1722 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 NTSR2O95665 410 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 TOP1P11387 765 aaKnown RBP9.22□□□□□ -0.93
ATXN3-203ENST00000393287 DPEP1P16444 411 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 MNS1Q8NEH6 495 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 ZNF408Q9H9D4 720 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 CELF1Q92879 486 aaKnown RBP9.22□□□□□ -0.93
ATXN3-203ENST00000393287 EAF2Q96CJ1 260 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-203ENST00000393287 SPC25Q9HBM1 224 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 A0A0G2JLW4 131 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 KIF2AO00139 706 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-203ENST00000393287 KRT13P13646 458 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 PDE6AP16499 860 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 HOXA7P31268 230 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-203ENST00000393287 BCAMP50895 628 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 PTPN12Q05209 780 aaKnown RBP9.22□□□□□ -0.93
ATXN3-203ENST00000393287 GRM1Q13255 1194 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 GIMAP6Q6P9H5 292 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 DBNDD1Q9H9R9 158 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 EXOC7Q9UPT5 735 aa9.22□□□□□ -0.93
ATXN3-203ENST00000393287 UVSSAQ2YD98 709 aa9.21□□□□□ -0.93
ATXN3-203ENST00000393287 CERKLQ49MI3 558 aaPredicted RBP9.21□□□□□ -0.93
ATXN3-203ENST00000393287 BICD1Q96G01 975 aa9.21□□□□□ -0.93
ATXN3-203ENST00000393287 ATP6V0A2Q9Y487 856 aa9.21□□□□□ -0.93
ATXN3-203ENST00000393287 AHDC1Q5TGY3 1603 aaPredicted RBP9.21□□□□□ -0.93
ATXN3-203ENST00000393287 CHRNA5P30532 468 aa9.21□□□□□ -0.93
ATXN3-203ENST00000393287 GNPTABQ3T906 1256 aa9.21□□□□□ -0.93
ATXN3-203ENST00000393287 SYNE4Q8N205 404 aa9.21□□□□□ -0.93
ATXN3-203ENST00000393287 ZSCAN10Q96SZ4 725 aaPredicted RBP9.21□□□□□ -0.93
ATXN3-203ENST00000393287 NOM1Q5C9Z4 860 aaKnown RBP9.21□□□□□ -0.94
ATXN3-203ENST00000393287 SLC10A5Q5PT55 438 aa9.21□□□□□ -0.94
ATXN3-203ENST00000393287 PTPDC1A2A3K4 754 aa9.21□□□□□ -0.94
ATXN3-203ENST00000393287 ASPRV1Q53RT3 343 aa9.21□□□□□ -0.94
ATXN3-203ENST00000393287 MAPKAPK5Q8IW41 473 aa9.21□□□□□ -0.94
ATXN3-203ENST00000393287 IFNL3Q8IZI9 196 aa9.21□□□□□ -0.94
ATXN3-203ENST00000393287 CCDC82Q8N4S0 544 aa9.21□□□□□ -0.94
ATXN3-203ENST00000393287 MRPS27Q92552 414 aaKnown RBP9.21□□□□□ -0.94
ATXN3-203ENST00000393287 COPB2P35606 906 aa9.21□□□□□ -0.94
ATXN3-203ENST00000393287 FOXP4Q8IVH2 680 aaPredicted RBP9.21□□□□□ -0.94
ATXN3-203ENST00000393287 EXOC8Q8IYI6 725 aa9.21□□□□□ -0.94
ATXN3-203ENST00000393287 DTHD1Q6ZMT9 781 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 ZNF274Q96GC6 653 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-203ENST00000393287 TBC1D2Q9BYX2 928 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 F13A1P00488 732 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 DRC1Q96MC2 740 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 GPHNQ9NQX3 736 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-203ENST00000393287 SPA17Q15506 151 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 GPATCH4Q5T3I0 446 aaKnown RBP9.2□□□□□ -0.94
ATXN3-203ENST00000393287 VTI1AQ96AJ9 217 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 RUFY1Q96T51 708 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 TTC12Q9H892 705 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-203ENST00000393287 PNMA3Q9UL41 463 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 MINPP1Q9UNW1 487 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 RAD17O75943 681 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 FAM13AO94988 1023 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 USP17L8P0C7I0 530 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 ABCD1P33897 745 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 SYKP43405 635 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 AK2P54819 239 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 PDIA6Q15084 440 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 CCDC40Q4G0X9 1142 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 KRT26Q7Z3Y9 468 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 SLC4A8Q2Y0W8 1093 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 ZNRF3Q9ULT6 936 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 ADCY9O60503 1353 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 ZEB2O60315 1214 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 YEATS4O95619 227 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 FOSP01100 380 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-203ENST00000393287 APOBRQ0VD83 1088 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 NONOQ15233 471 aaKnown RBP eCLIP9.2□□□□□ -0.94
ATXN3-203ENST00000393287 ABCB5Q2M3G0 1257 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 UBA5Q9GZZ9 404 aa9.2□□□□□ -0.94
ATXN3-203ENST00000393287 ROBO1Q9Y6N7 1651 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 H0YCG3 227 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 HSPA4P34932 840 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 ZMYM1Q5SVZ6 1142 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 SMIM5Q71RC9 77 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 KDM3AQ9Y4C1 1321 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 LTBP4Q8N2S1 1624 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 B4E1Z4 1266 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 FAM160B2Q86V87 743 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 ANKRD62A6NC57 917 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 ZSCAN12O43309 604 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 PHKA1P46020 1223 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 GSDMDP57764 484 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 RRAGBQ5VZM2 374 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 CACNA2D4Q7Z3S7 1137 aa9.19□□□□□ -0.94
ATXN3-203ENST00000393287 UPF1Q92900 1129 aaKnown RBP eCLIP9.19□□□□□ -0.945e-6■□□□□ 10.5
ATXN3-203ENST00000393287 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms