RNA–Protein interactions for RNA: ENST00000393272.7

NPHP1-203, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 2,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-203ENST00000393272 G3BP1Q13283 466 aaKnown RBP eCLIP8.12□□□□□ -1.11
NPHP1-203ENST00000393272 PDCLQ13371 301 aa8.12□□□□□ -1.11
NPHP1-203ENST00000393272 PPFIBP1Q86W92 1011 aa8.12□□□□□ -1.11
NPHP1-203ENST00000393272 NUTM2AQ8IVF1 878 aaPredicted RBP8.12□□□□□ -1.11
NPHP1-203ENST00000393272 NALCNQ8IZF0 1738 aa8.12□□□□□ -1.11
NPHP1-203ENST00000393272 KLHDC4Q8TBB5 520 aa8.12□□□□□ -1.11
NPHP1-203ENST00000393272 KLC4Q9NSK0 619 aa8.12□□□□□ -1.11
NPHP1-203ENST00000393272 FRMD3A2A2Y4 597 aa8.12□□□□□ -1.11
NPHP1-203ENST00000393272 ENC1O14682 589 aa8.12□□□□□ -1.11
NPHP1-203ENST00000393272 MCM3P25205 808 aa8.12□□□□□ -1.11
NPHP1-203ENST00000393272 INHBEP58166 350 aa8.12□□□□□ -1.11
NPHP1-203ENST00000393272 CWF19L2Q2TBE0 894 aaKnown RBP8.12□□□□□ -1.11
NPHP1-203ENST00000393272 WLSQ5T9L3 541 aa8.12□□□□□ -1.11
NPHP1-203ENST00000393272 B4GALNT4Q76KP1 1039 aa8.12□□□□□ -1.11
NPHP1-203ENST00000393272 ZNF274Q96GC6 653 aaPredicted RBP8.12□□□□□ -1.11
NPHP1-203ENST00000393272 CENPHQ9H3R5 247 aa8.12□□□□□ -1.11
NPHP1-203ENST00000393272 TRIM10Q9UDY6 481 aa8.12□□□□□ -1.11
NPHP1-203ENST00000393272 MAN1B1Q9UKM7 699 aa8.12□□□□□ -1.11
NPHP1-203ENST00000393272 CEMIPQ8WUJ3 1361 aa8.12□□□□□ -1.11
NPHP1-203ENST00000393272 MED1Q15648 1581 aaPredicted RBP8.12□□□□□ -1.11
NPHP1-203ENST00000393272 SRGAP2O75044 1071 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 CASP14P31944 242 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 FXR1P51114 621 aaKnown RBP eCLIP8.11□□□□□ -1.11
NPHP1-203ENST00000393272 MRPL12P52815 198 aaKnown RBP8.11□□□□□ -1.11
NPHP1-203ENST00000393272 ERVK-24P63145 666 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 MCMDC2Q4G0Z9 681 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 CEP85LQ5SZL2 805 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 CCDC102BQ68D86 513 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 APTXQ7Z2E3 356 aaKnown RBP8.11□□□□□ -1.11
NPHP1-203ENST00000393272 TRAPPC11Q7Z392 1133 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 RAB11FIP4Q86YS3 637 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 ENOX1Q8TC92 643 aaKnown RBP8.11□□□□□ -1.11
NPHP1-203ENST00000393272 EYA1Q99502 592 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 HINFPQ9BQA5 517 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 TRIM6Q9C030 488 aaPredicted RBP8.11□□□□□ -1.11
NPHP1-203ENST00000393272 POLD4Q9HCU8 107 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 E7EWF7 191 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 KIF3CO14782 793 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 IRF6O14896 467 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 GYPCP04921 128 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 CCDC40Q4G0X9 1142 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 SLC9C2Q5TAH2 1124 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 RESP18Q5W5W9 173 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 ANKRD18AQ8IVF6 992 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 CCDC13Q8IYE1 715 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 RRP36Q96EU6 259 aaKnown RBP8.11□□□□□ -1.11
NPHP1-203ENST00000393272 KAZALD1Q96I82 304 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 CAPZA3Q96KX2 299 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 MYO1AQ9UBC5 1043 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 TAOK2Q9UL54 1235 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 KCNH3Q9ULD8 1083 aa8.11□□□□□ -1.11
NPHP1-203ENST00000393272 KDM6AO15550 1401 aaPredicted RBP8.11□□□□□ -1.11
NPHP1-203ENST00000393272 TARSL2A2RTX5 802 aaKnown RBP8.1□□□□□ -1.11
NPHP1-203ENST00000393272 RASSF9O75901 435 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 CRYMQ14894 314 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 PTPAQ15257 358 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 NBPF20Q3BBV1 942 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 SPECC1Q5M775 1068 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 CCNI2Q6ZMN8 369 aaPredicted RBP8.1□□□□□ -1.11
NPHP1-203ENST00000393272 DDX46Q7L014 1031 aaKnown RBP8.1□□□□□ -1.11
NPHP1-203ENST00000393272 CEP57Q86XR8 500 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 KIRREL3Q8IZU9 778 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 SUCLG2Q96I99 432 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 VCPKMTQ9H867 229 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 DDX20Q9UHI6 824 aaKnown RBP8.1□□□□□ -1.11
NPHP1-203ENST00000393272 IGSF1Q8N6C5 1336 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 PRR36Q9H6K5 1346 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 FAM237AA0A1B0GTK4 181 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 ATP1A1P05023 1023 aaKnown RBP8.1□□□□□ -1.11
NPHP1-203ENST00000393272 PDHBP11177 359 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 ERCC3P19447 782 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 CALRP27797 417 aaKnown RBP8.1□□□□□ -1.11
NPHP1-203ENST00000393272 PBX1P40424 430 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 SMTNP53814 917 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 MDM2Q00987 491 aaPredicted RBP8.1□□□□□ -1.11
NPHP1-203ENST00000393272 TBC1D8BQ0IIM8 1120 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 GRIPAP1Q4V328 841 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 TMED8Q6PL24 325 aaPredicted RBP8.1□□□□□ -1.11
NPHP1-203ENST00000393272 FMNL3Q8IVF7 1028 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 ARL8AQ96BM9 186 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 SLF1Q9BQI6 1058 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 DBNLQ9UJU6 430 aaKnown RBP8.1□□□□□ -1.11
NPHP1-203ENST00000393272 GUCA1BQ9UMX6 200 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 GOLGA8KD6RF30 607 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 ZEB2O60315 1214 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 PPP6R2O75170 966 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 RTN2O75298 545 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 FECHP22830 423 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 ATP1A2P50993 1020 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 CCNHP51946 323 aaPredicted RBP8.1□□□□□ -1.11
NPHP1-203ENST00000393272 CLNS1AP54105 237 aaKnown RBP8.1□□□□□ -1.11
NPHP1-203ENST00000393272 NAP1L1P55209 391 aaKnown RBP8.1□□□□□ -1.11
NPHP1-203ENST00000393272 POSTNQ15063 836 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 TTMPQ5BVD1 217 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 RNF187Q5TA31 235 aaPredicted RBP8.1□□□□□ -1.11
NPHP1-203ENST00000393272 NAA35Q5VZE5 725 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 SND1Q7KZF4 910 aaKnown RBP eCLIP8.1□□□□□ -1.11
NPHP1-203ENST00000393272 GRAMD1CQ8IYS0 662 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 MLKLQ8NB16 471 aa8.1□□□□□ -1.11
NPHP1-203ENST00000393272 AENQ8WTP8 325 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms