RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 MAP3K14Q99558 947 aa16.56■□□□□ 0.24
MKS1-203ENST00000393120 DNAJC25Q9H1X3 360 aa16.56■□□□□ 0.24
MKS1-203ENST00000393120 LRRC4BQ9NT99 713 aa16.56■□□□□ 0.24
MKS1-203ENST00000393120 TNKSO95271 1327 aa16.56■□□□□ 0.24
MKS1-203ENST00000393120 FAM237AA0A1B0GTK4 181 aa16.55■□□□□ 0.24
MKS1-203ENST00000393120 NPHP1O15259 732 aa16.55■□□□□ 0.24
MKS1-203ENST00000393120 MMP1P03956 469 aa16.55■□□□□ 0.24
MKS1-203ENST00000393120 GNL2Q13823 731 aaKnown RBP16.55■□□□□ 0.24
MKS1-203ENST00000393120 IQCB1Q15051 598 aa16.55■□□□□ 0.24
MKS1-203ENST00000393120 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.55■□□□□ 0.24
MKS1-203ENST00000393120 CERKQ8TCT0 537 aa16.55■□□□□ 0.24
MKS1-203ENST00000393120 ANO10Q9NW15 660 aa16.55■□□□□ 0.24
MKS1-203ENST00000393120 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.55■□□□□ 0.24
MKS1-203ENST00000393120 A0A1B0GVL5 298 aa16.55■□□□□ 0.24
MKS1-203ENST00000393120 SAFBQ15424 915 aaKnown RBP eCLIP16.55■□□□□ 0.24
MKS1-203ENST00000393120 SLC27A3Q5K4L6 730 aa16.55■□□□□ 0.24
MKS1-203ENST00000393120 TXNRD3Q86VQ6 643 aa16.55■□□□□ 0.24
MKS1-203ENST00000393120 ENAHQ8N8S7 591 aaPredicted RBP16.55■□□□□ 0.24
MKS1-203ENST00000393120 WDR66Q8TBY9 1149 aa16.55■□□□□ 0.24
MKS1-203ENST00000393120 TIGD1Q96MW7 591 aa16.55■□□□□ 0.24
MKS1-203ENST00000393120 RNF26Q9BY78 433 aaPredicted RBP16.55■□□□□ 0.24
MKS1-203ENST00000393120 FOXP1Q9H334 677 aaPredicted RBP16.55■□□□□ 0.24
MKS1-203ENST00000393120 DCP1AQ9NPI6 582 aaPredicted RBP16.55■□□□□ 0.24
MKS1-203ENST00000393120 DUOX1Q9NRD9 1551 aa16.54■□□□□ 0.24
MKS1-203ENST00000393120 XDHP47989 1333 aa16.54■□□□□ 0.24
MKS1-203ENST00000393120 GOLGA6L6A8MZA4 724 aa16.54■□□□□ 0.24
MKS1-203ENST00000393120 USP17L12C9JPN9 530 aa16.54■□□□□ 0.24
MKS1-203ENST00000393120 USP17L21D6R901 530 aa16.54■□□□□ 0.24
MKS1-203ENST00000393120 CALM1P0DP23 149 aa16.54■□□□□ 0.24
MKS1-203ENST00000393120 CALM2P0DP24 149 aa16.54■□□□□ 0.24
MKS1-203ENST00000393120 CALM3P0DP25 149 aa16.54■□□□□ 0.24
MKS1-203ENST00000393120 CRY2Q49AN0 593 aa16.54■□□□□ 0.24
MKS1-203ENST00000393120 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.54■□□□□ 0.24
MKS1-203ENST00000393120 IQCA1Q86XH1 822 aa16.54■□□□□ 0.24
MKS1-203ENST00000393120 NOSTRINQ8IVI9 506 aa16.54■□□□□ 0.24
MKS1-203ENST00000393120 SDF4Q9BRK5 362 aa16.54■□□□□ 0.24
MKS1-203ENST00000393120 ARPP21Q9UBL0 812 aaPredicted RBP16.54■□□□□ 0.24
MKS1-203ENST00000393120 WDHD1O75717 1129 aaPredicted RBP16.53■□□□□ 0.24
MKS1-203ENST00000393120 SLC3A2P08195 630 aaKnown RBP16.53■□□□□ 0.24
MKS1-203ENST00000393120 PRDX5P30044 214 aa16.53■□□□□ 0.24
MKS1-203ENST00000393120 PLCB2Q00722 1185 aa16.53■□□□□ 0.24
MKS1-203ENST00000393120 ANKIB1Q9P2G1 1089 aa16.53■□□□□ 0.24
MKS1-203ENST00000393120 TNRC6CQ9HCJ0 1690 aaKnown RBP16.53■□□□□ 0.24
MKS1-203ENST00000393120 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.53■□□□□ 0.24
MKS1-203ENST00000393120 ZNF202O95125 648 aa16.53■□□□□ 0.24
MKS1-203ENST00000393120 HMGB2P26583 209 aaKnown RBP16.53■□□□□ 0.24
MKS1-203ENST00000393120 GUCY1A2P33402 732 aa16.53■□□□□ 0.24
MKS1-203ENST00000393120 KIAA2012Q0VF49 1180 aa16.53■□□□□ 0.24
MKS1-203ENST00000393120 CHAF1AQ13111 956 aaPredicted RBP16.53■□□□□ 0.24
MKS1-203ENST00000393120 PRR5LQ6MZQ0 368 aa16.53■□□□□ 0.24
MKS1-203ENST00000393120 SARM1Q6SZW1 724 aa16.53■□□□□ 0.24
MKS1-203ENST00000393120 CATIPQ7Z7H3 387 aa16.53■□□□□ 0.24
MKS1-203ENST00000393120 PLA2G4DQ86XP0 818 aa16.53■□□□□ 0.24
MKS1-203ENST00000393120 RBM28Q9NW13 759 aaKnown RBP16.53■□□□□ 0.24
MKS1-203ENST00000393120 AATFQ9NY61 560 aaKnown RBP eCLIP16.53■□□□□ 0.24
MKS1-203ENST00000393120 KIAA1468Q9P260 1216 aa16.53■□□□□ 0.24
MKS1-203ENST00000393120 HPSEQ9Y251 543 aa16.53■□□□□ 0.24
MKS1-203ENST00000393120 CYP2D7A0A087X1C5 515 aa16.52■□□□□ 0.23
MKS1-203ENST00000393120 SMIM22K7EJ46 135 aa16.52■□□□□ 0.23
MKS1-203ENST00000393120 CUTAO60888 179 aa16.52■□□□□ 0.23
MKS1-203ENST00000393120 DDAH1O94760 285 aa16.52■□□□□ 0.23
MKS1-203ENST00000393120 TERF1P54274 439 aa16.52■□□□□ 0.23
MKS1-203ENST00000393120 RBM6P78332 1123 aaKnown RBP16.52■□□□□ 0.23
MKS1-203ENST00000393120 FUT2Q10981 343 aa16.52■□□□□ 0.23
MKS1-203ENST00000393120 IFIT1BQ5T764 474 aaKnown RBP16.52■□□□□ 0.23
MKS1-203ENST00000393120 STK11IPQ8N1F8 1099 aa16.52■□□□□ 0.23
MKS1-203ENST00000393120 NUP133Q8WUM0 1156 aa16.52■□□□□ 0.23
MKS1-203ENST00000393120 NAT10Q9H0A0 1025 aaKnown RBP16.52■□□□□ 0.23
MKS1-203ENST00000393120 MAST2Q6P0Q8 1798 aa16.51■□□□□ 0.23
MKS1-203ENST00000393120 UBE2Q2LH0YL09 131 aa16.51■□□□□ 0.23
MKS1-203ENST00000393120 PRPF3O43395 683 aaKnown RBP16.51■□□□□ 0.23
MKS1-203ENST00000393120 GYS1P13807 737 aa16.51■□□□□ 0.23
MKS1-203ENST00000393120 PFKFB1P16118 471 aa16.51■□□□□ 0.23
MKS1-203ENST00000393120 ZNF75DP51815 510 aa16.51■□□□□ 0.23
MKS1-203ENST00000393120 GSTO1P78417 241 aa16.51■□□□□ 0.23
MKS1-203ENST00000393120 TROAPQ12815 778 aa16.51■□□□□ 0.23
MKS1-203ENST00000393120 RILPL1Q5EBL4 403 aa16.51■□□□□ 0.23
MKS1-203ENST00000393120 C11orf57Q6ZUT1 292 aaPredicted RBP16.51■□□□□ 0.23
MKS1-203ENST00000393120 DIS3L2Q8IYB7 885 aaKnown RBP16.51■□□□□ 0.23
MKS1-203ENST00000393120 MORC2Q9Y6X9 1032 aaPredicted RBP16.51■□□□□ 0.23
MKS1-203ENST00000393120 BTBD18B2RXH4 712 aa16.51■□□□□ 0.23
MKS1-203ENST00000393120 GOLGA6L19H0YKK7 550 aa16.51■□□□□ 0.23
MKS1-203ENST00000393120 CDC25BP30305 580 aa16.51■□□□□ 0.23
MKS1-203ENST00000393120 ZNF804AQ7Z570 1209 aa16.51■□□□□ 0.23
MKS1-203ENST00000393120 DZIP1Q86YF9 867 aaKnown RBP16.51■□□□□ 0.23
MKS1-203ENST00000393120 CEP57L1Q8IYX8 460 aa16.51■□□□□ 0.23
MKS1-203ENST00000393120 PIBF1Q8WXW3 757 aa16.51■□□□□ 0.23
MKS1-203ENST00000393120 BPIFA3Q9BQP9 254 aa16.51■□□□□ 0.23
MKS1-203ENST00000393120 MKRN1Q9UHC7 482 aaKnown RBP16.51■□□□□ 0.23
MKS1-203ENST00000393120 ECM29Q5VYK3 1845 aa16.5■□□□□ 0.23
MKS1-203ENST00000393120 LDHBP07195 334 aaKnown RBP16.5■□□□□ 0.23
MKS1-203ENST00000393120 MARCKSP29966 332 aaPredicted RBP16.5■□□□□ 0.23
MKS1-203ENST00000393120 HSPA1LP34931 641 aa16.5■□□□□ 0.23
MKS1-203ENST00000393120 PPP4CP60510 307 aa16.5■□□□□ 0.23
MKS1-203ENST00000393120 PDE4BQ07343 736 aa16.5■□□□□ 0.23
MKS1-203ENST00000393120 RESP18Q5W5W9 173 aa16.5■□□□□ 0.23
MKS1-203ENST00000393120 ELOA2Q8IYF1 753 aaPredicted RBP16.5■□□□□ 0.23
MKS1-203ENST00000393120 RPGRQ92834 1020 aaKnown RBP16.5■□□□□ 0.23
MKS1-203ENST00000393120 XBP1P17861 261 aa16.49■□□□□ 0.23
MKS1-203ENST00000393120 HOXA10P31260 410 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms