RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 PICALMQ13492 652 aa17.5■□□□□ 0.39
MKS1-202ENST00000393119 TMC4Q7Z404 712 aa17.5■□□□□ 0.39
MKS1-202ENST00000393119 ESR2Q92731 530 aa17.5■□□□□ 0.39
MKS1-202ENST00000393119 UBAC1Q9BSL1 405 aa17.5■□□□□ 0.39
MKS1-202ENST00000393119 RNF41Q9H4P4 317 aaPredicted RBP17.5■□□□□ 0.39
MKS1-202ENST00000393119 ISY1Q9ULR0 285 aaKnown RBP17.5■□□□□ 0.39
MKS1-202ENST00000393119 TTF2Q9UNY4 1162 aaKnown RBP17.5■□□□□ 0.39
MKS1-202ENST00000393119 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.5■□□□□ 0.39
MKS1-202ENST00000393119 DAGLAQ9Y4D2 1042 aa17.5■□□□□ 0.39
MKS1-202ENST00000393119 TIAM2Q8IVF5 1701 aa17.49■□□□□ 0.39
MKS1-202ENST00000393119 LIFRP42702 1097 aa17.49■□□□□ 0.39
MKS1-202ENST00000393119 ZSCAN23Q3MJ62 389 aa17.49■□□□□ 0.39
MKS1-202ENST00000393119 TEX11Q8IYF3 940 aa17.49■□□□□ 0.39
MKS1-202ENST00000393119 GPR75-ASB3A0A0A6YYF3 556 aa17.48■□□□□ 0.39
MKS1-202ENST00000393119 HMGN5P82970 282 aaKnown RBP17.48■□□□□ 0.39
MKS1-202ENST00000393119 GLIPR1L2Q4G1C9 344 aa17.48■□□□□ 0.39
MKS1-202ENST00000393119 C12orf60Q5U649 245 aa17.48■□□□□ 0.39
MKS1-202ENST00000393119 STYK1Q6J9G0 422 aa17.48■□□□□ 0.39
MKS1-202ENST00000393119 KIAA0825Q8IV33 1275 aa17.48■□□□□ 0.39
MKS1-202ENST00000393119 ZSCAN10Q96SZ4 725 aaPredicted RBP17.48■□□□□ 0.39
MKS1-202ENST00000393119 FAM205AQ6ZU69 1335 aa17.48■□□□□ 0.39
MKS1-202ENST00000393119 KIF28PB7ZC32 967 aa17.48■□□□□ 0.39
MKS1-202ENST00000393119 BAG3O95817 575 aa17.48■□□□□ 0.39
MKS1-202ENST00000393119 POLR3DP05423 398 aaPredicted RBP17.48■□□□□ 0.39
MKS1-202ENST00000393119 DPEP1P16444 411 aa17.48■□□□□ 0.39
MKS1-202ENST00000393119 GSTO1P78417 241 aa17.48■□□□□ 0.39
MKS1-202ENST00000393119 USP17L3A6NCW0 530 aa17.47■□□□□ 0.39
MKS1-202ENST00000393119 USP17L4A6NCW7 530 aa17.47■□□□□ 0.39
MKS1-202ENST00000393119 CACNB3P54284 484 aa17.47■□□□□ 0.39
MKS1-202ENST00000393119 PPP4CP60510 307 aa17.47■□□□□ 0.39
MKS1-202ENST00000393119 GIMAP6Q6P9H5 292 aa17.47■□□□□ 0.39
MKS1-202ENST00000393119 USP17L1Q7RTZ2 530 aa17.47■□□□□ 0.39
MKS1-202ENST00000393119 ZNF654Q8IZM8 581 aa17.47■□□□□ 0.39
MKS1-202ENST00000393119 SLC26A6Q9BXS9 759 aa17.47■□□□□ 0.39
MKS1-202ENST00000393119 TMX4Q9H1E5 349 aaPredicted RBP17.47■□□□□ 0.39
MKS1-202ENST00000393119 MTMR7Q9Y216 660 aa17.47■□□□□ 0.39
MKS1-202ENST00000393119 FGRP09769 529 aa17.47■□□□□ 0.39
MKS1-202ENST00000393119 KCNA3P22001 575 aa17.47■□□□□ 0.39
MKS1-202ENST00000393119 RASGRP2Q7LDG7 609 aa17.47■□□□□ 0.39
MKS1-202ENST00000393119 DDX4Q9NQI0 724 aaKnown RBP17.47■□□□□ 0.39
MKS1-202ENST00000393119 ERICH2A1L162 156 aa17.46■□□□□ 0.39
MKS1-202ENST00000393119 SYCE3A1L190 88 aa17.46■□□□□ 0.39
MKS1-202ENST00000393119 ECE2O60344 883 aa17.46■□□□□ 0.39
MKS1-202ENST00000393119 C8orf76Q96K31 380 aa17.46■□□□□ 0.39
MKS1-202ENST00000393119 IL17RBQ9NRM6 502 aa17.46■□□□□ 0.39
MKS1-202ENST00000393119 ARPP21Q9UBL0 812 aaPredicted RBP17.46■□□□□ 0.39
MKS1-202ENST00000393119 PPP1R1BQ9UD71 204 aaPredicted RBP17.46■□□□□ 0.39
MKS1-202ENST00000393119 MYH2Q9UKX2 1941 aa17.46■□□□□ 0.39
MKS1-202ENST00000393119 FLT1P17948 1338 aa17.46■□□□□ 0.39
MKS1-202ENST00000393119 LDHCP07864 332 aa17.46■□□□□ 0.39
MKS1-202ENST00000393119 TFAP4Q01664 338 aa17.46■□□□□ 0.39
MKS1-202ENST00000393119 SBK1Q52WX2 424 aa17.46■□□□□ 0.39
MKS1-202ENST00000393119 NOL10Q9BSC4 688 aaKnown RBP17.46■□□□□ 0.39
MKS1-202ENST00000393119 ATP6V1DQ9Y5K8 247 aa17.46■□□□□ 0.39
MKS1-202ENST00000393119 CCDC88AQ3V6T2 1871 aa17.45■□□□□ 0.38
MKS1-202ENST00000393119 RGPD3A6NKT7 1758 aaPredicted RBP17.45■□□□□ 0.38
MKS1-202ENST00000393119 RGPD4Q7Z3J3 1758 aa17.45■□□□□ 0.38
MKS1-202ENST00000393119 PLEKHA8P1O95397 391 aa17.45■□□□□ 0.38
MKS1-202ENST00000393119 PIBF1Q8WXW3 757 aa17.45■□□□□ 0.38
MKS1-202ENST00000393119 ALG1Q9BT22 464 aa17.45■□□□□ 0.38
MKS1-202ENST00000393119 TSPY2A6NKD2 308 aa17.45■□□□□ 0.38
MKS1-202ENST00000393119 PTMSP20962 102 aa17.45■□□□□ 0.38
MKS1-202ENST00000393119 SART3Q15020 963 aaKnown RBP17.45■□□□□ 0.38
MKS1-202ENST00000393119 IFIT1BQ5T764 474 aaKnown RBP17.45■□□□□ 0.38
MKS1-202ENST00000393119 ZFPM1Q8IX07 1006 aa17.45■□□□□ 0.38
MKS1-202ENST00000393119 TMEM87AQ8NBN3 555 aa17.45■□□□□ 0.38
MKS1-202ENST00000393119 TBC1D22AQ8WUA7 517 aa17.45■□□□□ 0.38
MKS1-202ENST00000393119 CNKSR1Q969H4 720 aa17.45■□□□□ 0.38
MKS1-202ENST00000393119 NAP1L5Q96NT1 182 aaPredicted RBP17.45■□□□□ 0.38
MKS1-202ENST00000393119 GAKO14976 1311 aa17.45■□□□□ 0.38
MKS1-202ENST00000393119 YDJCA8MPS7 323 aa17.44■□□□□ 0.38
MKS1-202ENST00000393119 ZBTB22O15209 634 aa17.44■□□□□ 0.38
MKS1-202ENST00000393119 DHX16O60231 1041 aaKnown RBP17.44■□□□□ 0.38
MKS1-202ENST00000393119 IARSP41252 1262 aaKnown RBP17.44■□□□□ 0.38
MKS1-202ENST00000393119 KRT85P78386 507 aa17.44■□□□□ 0.38
MKS1-202ENST00000393119 RTN1Q16799 776 aa17.44■□□□□ 0.38
MKS1-202ENST00000393119 FANCBQ8NB91 859 aa17.44■□□□□ 0.38
MKS1-202ENST00000393119 FBXO18Q8NFZ0 1043 aa17.44■□□□□ 0.38
MKS1-202ENST00000393119 LEO1Q8WVC0 666 aaPredicted RBP17.44■□□□□ 0.38
MKS1-202ENST00000393119 SHISA4Q96DD7 197 aa17.44■□□□□ 0.38
MKS1-202ENST00000393119 USP28Q96RU2 1077 aa17.44■□□□□ 0.38
MKS1-202ENST00000393119 ADAMTSL1Q8N6G6 1762 aa17.44■□□□□ 0.38
MKS1-202ENST00000393119 NFIAQ12857 509 aa17.44■□□□□ 0.38
MKS1-202ENST00000393119 RCSD1Q6JBY9 416 aa17.44■□□□□ 0.38
MKS1-202ENST00000393119 PGBD1Q96JS3 809 aa17.44■□□□□ 0.38
MKS1-202ENST00000393119 VEGFAP15692 232 aaPredicted RBP17.43■□□□□ 0.38
MKS1-202ENST00000393119 SYNE3Q6ZMZ3 975 aa17.43■□□□□ 0.38
MKS1-202ENST00000393119 NBPF11Q86T75 865 aa17.43■□□□□ 0.38
MKS1-202ENST00000393119 KLHL34Q8N239 644 aa17.43■□□□□ 0.38
MKS1-202ENST00000393119 SPATA32Q96LK8 384 aa17.43■□□□□ 0.38
MKS1-202ENST00000393119 MKNK2Q9HBH9 465 aa17.43■□□□□ 0.38
MKS1-202ENST00000393119 ZNF277Q9NRM2 450 aaPredicted RBP17.43■□□□□ 0.38
MKS1-202ENST00000393119 KCNJ14Q9UNX9 436 aa17.43■□□□□ 0.38
MKS1-202ENST00000393119 MAST2Q6P0Q8 1798 aa17.43■□□□□ 0.38
MKS1-202ENST00000393119 ORC4O43929 436 aa17.43■□□□□ 0.38
MKS1-202ENST00000393119 LIG1P18858 919 aa17.43■□□□□ 0.38
MKS1-202ENST00000393119 R3HDM1Q15032 1099 aaKnown RBP17.43■□□□□ 0.38
MKS1-202ENST00000393119 EYA3Q99504 573 aa17.43■□□□□ 0.38
MKS1-202ENST00000393119 GRPEL1Q9HAV7 217 aa17.43■□□□□ 0.38
MKS1-202ENST00000393119 USP40Q9NVE5 1235 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms