RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 TGFBRAP1Q8WUH2 860 aa16.1■□□□□ 0.17
PTN-202ENST00000393083 PAPPA2Q9BXP8 1791 aa16.1■□□□□ 0.17
PTN-202ENST00000393083 TM6SF1Q9BZW5 370 aa16.1■□□□□ 0.17
PTN-202ENST00000393083 FZD1Q9UP38 647 aa16.1■□□□□ 0.17
PTN-202ENST00000393083 BAZ2AQ9UIF9 1905 aaKnown RBP16.1■□□□□ 0.17
PTN-202ENST00000393083 LAMB1P07942 1786 aa16.1■□□□□ 0.17
PTN-202ENST00000393083 CEP350Q5VT06 3117 aa16.09■□□□□ 0.17
PTN-202ENST00000393083 DDTLA6NHG4 134 aaPredicted RBP16.09■□□□□ 0.17
PTN-202ENST00000393083 FOXP2O15409 715 aa16.09■□□□□ 0.17
PTN-202ENST00000393083 PSMA5P28066 241 aa16.09■□□□□ 0.17
PTN-202ENST00000393083 MCM2P49736 904 aa16.09■□□□□ 0.17
PTN-202ENST00000393083 KRT32Q14532 448 aa16.09■□□□□ 0.17
PTN-202ENST00000393083 MAP3K11Q16584 847 aa16.09■□□□□ 0.17
PTN-202ENST00000393083 LCORLQ8N3X6 602 aa16.09■□□□□ 0.17
PTN-202ENST00000393083 HHIPL1Q96JK4 782 aa16.09■□□□□ 0.17
PTN-202ENST00000393083 OSBPL5Q9H0X9 879 aaPredicted RBP16.09■□□□□ 0.17
PTN-202ENST00000393083 SLKQ9H2G2 1235 aaPredicted RBP16.09■□□□□ 0.17
PTN-202ENST00000393083 TAF6LQ9Y6J9 622 aa16.09■□□□□ 0.17
PTN-202ENST00000393083 ATRNL1Q5VV63 1379 aa16.09■□□□□ 0.17
PTN-202ENST00000393083 FLT1P17948 1338 aa16.09■□□□□ 0.17
PTN-202ENST00000393083 UBE2Q2LH0YL09 131 aa16.09■□□□□ 0.17
PTN-202ENST00000393083 USP2O75604 605 aaPredicted RBP16.09■□□□□ 0.17
PTN-202ENST00000393083 CYP21A2P08686 494 aa16.09■□□□□ 0.17
PTN-202ENST00000393083 HUNKP57058 714 aa16.09■□□□□ 0.17
PTN-202ENST00000393083 PRKG1Q13976 671 aa16.09■□□□□ 0.17
PTN-202ENST00000393083 TSGA10IPQ3SY00 556 aa16.09■□□□□ 0.17
PTN-202ENST00000393083 PPP4R3CPQ6ZMV5 832 aa16.09■□□□□ 0.17
PTN-202ENST00000393083 ARMT1Q9H993 441 aa16.09■□□□□ 0.17
PTN-202ENST00000393083 ZSWIM6Q9HCJ5 1215 aa16.09■□□□□ 0.17
PTN-202ENST00000393083 CTNNA3Q9UI47 895 aa16.09■□□□□ 0.17
PTN-202ENST00000393083 CYP46A1Q9Y6A2 500 aa16.09■□□□□ 0.17
PTN-202ENST00000393083 COL2A1P02458 1487 aaPredicted RBP16.08■□□□□ 0.16
PTN-202ENST00000393083 CDK5RAP2Q96SN8 1893 aa16.08■□□□□ 0.16
PTN-202ENST00000393083 PPP1R12BO60237 982 aaPredicted RBP16.08■□□□□ 0.16
PTN-202ENST00000393083 CPA1P15085 419 aa16.08■□□□□ 0.16
PTN-202ENST00000393083 DEFB115Q30KQ5 88 aa16.08■□□□□ 0.16
PTN-202ENST00000393083 LDLRAD1Q5T700 205 aa16.08■□□□□ 0.16
PTN-202ENST00000393083 ARMC9Q7Z3E5 817 aa16.08■□□□□ 0.16
PTN-202ENST00000393083 MAPKAPK5Q8IW41 473 aa16.08■□□□□ 0.16
PTN-202ENST00000393083 TTC14Q96N46 770 aa16.08■□□□□ 0.16
PTN-202ENST00000393083 STRBPQ96SI9 672 aaKnown RBP16.08■□□□□ 0.16
PTN-202ENST00000393083 MKRN1Q9UHC7 482 aaKnown RBP16.08■□□□□ 0.16
PTN-202ENST00000393083 ANGEL1Q9UNK9 670 aaKnown RBP16.08■□□□□ 0.16
PTN-202ENST00000393083 HSP90AA1P07900 732 aaKnown RBP16.07■□□□□ 0.16
PTN-202ENST00000393083 MAP3K10Q02779 954 aa16.07■□□□□ 0.16
PTN-202ENST00000393083 TTLL12Q14166 644 aaPredicted RBP16.07■□□□□ 0.16
PTN-202ENST00000393083 BLOC1S2Q6QNY1 142 aa16.07■□□□□ 0.16
PTN-202ENST00000393083 NOL8Q76FK4 1167 aaKnown RBP16.07■□□□□ 0.16
PTN-202ENST00000393083 RUFY3Q7L099 469 aa16.07■□□□□ 0.16
PTN-202ENST00000393083 HOOK2Q96ED9 719 aa16.07■□□□□ 0.16
PTN-202ENST00000393083 CSRNP1Q96S65 589 aa16.07■□□□□ 0.16
PTN-202ENST00000393083 NAV1Q8NEY1 1877 aa16.07■□□□□ 0.16
PTN-202ENST00000393083 FOCADQ5VW36 1801 aa16.06■□□□□ 0.16
PTN-202ENST00000393083 IMMTQ16891 758 aaKnown RBP16.06■□□□□ 0.16
PTN-202ENST00000393083 MIGA2Q7L4E1 593 aa16.06■□□□□ 0.16
PTN-202ENST00000393083 ZSCAN29Q8IWY8 852 aaPredicted RBP16.06■□□□□ 0.16
PTN-202ENST00000393083 CRNKL1Q9BZJ0 848 aaKnown RBP16.06■□□□□ 0.16
PTN-202ENST00000393083 PDRG1Q9NUG6 133 aa16.06■□□□□ 0.16
PTN-202ENST00000393083 PRKAB2O43741 272 aa16.05■□□□□ 0.16
PTN-202ENST00000393083 FGAP02671 866 aa16.05■□□□□ 0.16
PTN-202ENST00000393083 APPP05067 770 aa16.05■□□□□ 0.16
PTN-202ENST00000393083 SLURP2P0DP57 97 aa16.05■□□□□ 0.16
PTN-202ENST00000393083 GNAT2P19087 354 aa16.05■□□□□ 0.16
PTN-202ENST00000393083 USP5P45974 858 aa16.05■□□□□ 0.16
PTN-202ENST00000393083 AK2P54819 239 aa16.05■□□□□ 0.16
PTN-202ENST00000393083 C1QBPQ07021 282 aaKnown RBP16.05■□□□□ 0.16
PTN-202ENST00000393083 STOX1Q6ZVD7 989 aa16.05■□□□□ 0.16
PTN-202ENST00000393083 SDR42E1Q8WUS8 393 aa16.05■□□□□ 0.16
PTN-202ENST00000393083 KLRG1Q96E93 195 aa16.05■□□□□ 0.16
PTN-202ENST00000393083 DHX36Q9H2U1 1008 aaKnown RBP16.05■□□□□ 0.16
PTN-202ENST00000393083 ZMYM6O95789 1325 aa16.05■□□□□ 0.16
PTN-202ENST00000393083 RPS6KB1P23443 525 aa16.04■□□□□ 0.16
PTN-202ENST00000393083 IREB2P48200 963 aaKnown RBP16.04■□□□□ 0.16
PTN-202ENST00000393083 VEGFBP49765 207 aa16.04■□□□□ 0.16
PTN-202ENST00000393083 DCAF15Q66K64 600 aa16.04■□□□□ 0.16
PTN-202ENST00000393083 RGMBQ6NW40 437 aa16.04■□□□□ 0.16
PTN-202ENST00000393083 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.04■□□□□ 0.16
PTN-202ENST00000393083 NEK1Q96PY6 1258 aa16.04■□□□□ 0.16
PTN-202ENST00000393083 DCP1AQ9NPI6 582 aaPredicted RBP16.04■□□□□ 0.16
PTN-202ENST00000393083 ZNF112Q9UJU3 913 aa16.04■□□□□ 0.16
PTN-202ENST00000393083 SLC4A4Q9Y6R1 1079 aa16.04■□□□□ 0.16
PTN-202ENST00000393083 UNCXA6NJT0 531 aa16.04■□□□□ 0.16
PTN-202ENST00000393083 FAM155AB1AL88 458 aaPredicted RBP16.04■□□□□ 0.16
PTN-202ENST00000393083 PATL2C9JE40 543 aaKnown RBP16.04■□□□□ 0.16
PTN-202ENST00000393083 TBC1D12O60347 775 aa16.04■□□□□ 0.16
PTN-202ENST00000393083 HAND2P61296 217 aa16.04■□□□□ 0.16
PTN-202ENST00000393083 CYP4F22Q6NT55 531 aa16.04■□□□□ 0.16
PTN-202ENST00000393083 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.04■□□□□ 0.16
PTN-202ENST00000393083 METTL16Q86W50 562 aaKnown RBP16.04■□□□□ 0.16
PTN-202ENST00000393083 TMX3Q96JJ7 454 aa16.04■□□□□ 0.16
PTN-202ENST00000393083 CAPNS2Q96L46 248 aa16.04■□□□□ 0.16
PTN-202ENST00000393083 ZNF341Q9BYN7 854 aa16.04■□□□□ 0.16
PTN-202ENST00000393083 EPB41L4AQ9HCS5 686 aaPredicted RBP16.04■□□□□ 0.16
PTN-202ENST00000393083 FOXD4L1Q9NU39 408 aa16.04■□□□□ 0.16
PTN-202ENST00000393083 SAP30BPQ9UHR5 308 aaKnown RBP16.04■□□□□ 0.16
PTN-202ENST00000393083 E7EWF7 191 aa16.03■□□□□ 0.16
PTN-202ENST00000393083 ZNF157P51786 506 aaPredicted RBP16.03■□□□□ 0.16
PTN-202ENST00000393083 MAP3K9P80192 1104 aa16.03■□□□□ 0.16
PTN-202ENST00000393083 ALX1Q15699 326 aa16.03■□□□□ 0.16
PTN-202ENST00000393083 CLMNQ96JQ2 1002 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms