RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 TXNDC16Q9P2K2 825 aa14.66□□□□□ -0.06
LCA5-202ENST00000392959 MTMR6Q9Y217 621 aa14.66□□□□□ -0.06
LCA5-202ENST00000392959 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.66□□□□□ -0.06
LCA5-202ENST00000392959 PCDH11XQ9BZA7 1347 aa14.66□□□□□ -0.06
LCA5-202ENST00000392959 PCDH11YQ9BZA8 1340 aa14.66□□□□□ -0.06
LCA5-202ENST00000392959 KIAA0232Q92628 1395 aa14.66□□□□□ -0.06
LCA5-202ENST00000392959 SSH2Q76I76 1423 aa14.66□□□□□ -0.06
LCA5-202ENST00000392959 TEX14Q8IWB6 1497 aa14.66□□□□□ -0.06
LCA5-202ENST00000392959 E7EWF7 191 aa14.66□□□□□ -0.06
LCA5-202ENST00000392959 OAS2P29728 719 aaKnown RBP14.66□□□□□ -0.06
LCA5-202ENST00000392959 PKP1Q13835 747 aa14.66□□□□□ -0.06
LCA5-202ENST00000392959 RUFY4Q6ZNE9 571 aa14.66□□□□□ -0.06
LCA5-202ENST00000392959 RSRC1Q96IZ7 334 aaKnown RBP14.66□□□□□ -0.06
LCA5-202ENST00000392959 PALD1Q9ULE6 856 aa14.66□□□□□ -0.06
LCA5-202ENST00000392959 ASXL2Q76L83 1435 aa14.66□□□□□ -0.06
LCA5-202ENST00000392959 CCDC160A6NGH7 325 aa14.66□□□□□ -0.06
LCA5-202ENST00000392959 ATP5DP30049 168 aa14.66□□□□□ -0.06
LCA5-202ENST00000392959 CCDC84Q86UT8 332 aaPredicted RBP14.66□□□□□ -0.06
LCA5-202ENST00000392959 GAS2L3Q86XJ1 694 aa14.66□□□□□ -0.06
LCA5-202ENST00000392959 GPR161Q8N6U8 529 aaKnown RBP14.66□□□□□ -0.06
LCA5-202ENST00000392959 C19orf44Q9H6X5 657 aa14.66□□□□□ -0.06
LCA5-202ENST00000392959 SEC62Q99442 399 aaKnown RBP14.65□□□□□ -0.06
LCA5-202ENST00000392959 USP44Q9H0E7 712 aa14.65□□□□□ -0.06
LCA5-202ENST00000392959 ZBTB21Q9ULJ3 1066 aa14.65□□□□□ -0.06
LCA5-202ENST00000392959 KCNJ14Q9UNX9 436 aa14.65□□□□□ -0.06
LCA5-202ENST00000392959 KCNA6P17658 529 aa14.65□□□□□ -0.06
LCA5-202ENST00000392959 INF2Q27J81 1249 aa14.65□□□□□ -0.06
LCA5-202ENST00000392959 BEND3Q5T5X7 828 aa14.65□□□□□ -0.06
LCA5-202ENST00000392959 HAUS3Q68CZ6 603 aa14.65□□□□□ -0.06
LCA5-202ENST00000392959 FAM212AQ96EL1 285 aa14.65□□□□□ -0.06
LCA5-202ENST00000392959 IFT74Q96LB3 600 aa14.65□□□□□ -0.06
LCA5-202ENST00000392959 PPFIA1Q13136 1202 aa14.65□□□□□ -0.06
LCA5-202ENST00000392959 ASIC2Q16515 512 aa14.65□□□□□ -0.06
LCA5-202ENST00000392959 POTEDQ86YR6 584 aa14.65□□□□□ -0.06
LCA5-202ENST00000392959 PPFIBP2Q8ND30 876 aa14.65□□□□□ -0.06
LCA5-202ENST00000392959 STAMQ92783 540 aa14.65□□□□□ -0.06
LCA5-202ENST00000392959 USP28Q96RU2 1077 aa14.65□□□□□ -0.06
LCA5-202ENST00000392959 LRWD1Q9UFC0 647 aa14.65□□□□□ -0.06
LCA5-202ENST00000392959 WWC3Q9ULE0 1092 aa14.65□□□□□ -0.06
LCA5-202ENST00000392959 CCNT1O60563 726 aaKnown RBP14.64□□□□□ -0.07
LCA5-202ENST00000392959 NR1I2O75469 434 aa14.64□□□□□ -0.07
LCA5-202ENST00000392959 LRMPQ12912 555 aa14.64□□□□□ -0.07
LCA5-202ENST00000392959 SND1Q7KZF4 910 aaKnown RBP eCLIP14.64□□□□□ -0.07
LCA5-202ENST00000392959 CSRNP2Q9H175 543 aa14.64□□□□□ -0.07
LCA5-202ENST00000392959 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.64□□□□□ -0.07
LCA5-202ENST00000392959 PDE8AO60658 829 aa14.64□□□□□ -0.07
LCA5-202ENST00000392959 GIGYF1O75420 1035 aaPredicted RBP14.64□□□□□ -0.07
LCA5-202ENST00000392959 PAK2Q13177 524 aa14.64□□□□□ -0.07
LCA5-202ENST00000392959 NONOQ15233 471 aaKnown RBP eCLIP14.64□□□□□ -0.07
LCA5-202ENST00000392959 EDC3Q96F86 508 aaKnown RBP14.64□□□□□ -0.07
LCA5-202ENST00000392959 PTPRTO14522 1441 aa14.64□□□□□ -0.07
LCA5-202ENST00000392959 CEP104O60308 925 aa14.64□□□□□ -0.07
LCA5-202ENST00000392959 PARP10Q53GL7 1025 aa14.64□□□□□ -0.07
LCA5-202ENST00000392959 DPH6Q7L8W6 267 aa14.64□□□□□ -0.07
LCA5-202ENST00000392959 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.64□□□□□ -0.07
LCA5-202ENST00000392959 PSMB7Q99436 277 aa14.64□□□□□ -0.07
LCA5-202ENST00000392959 GPCPD1Q9NPB8 672 aa14.64□□□□□ -0.07
LCA5-202ENST00000392959 UTP11Q9Y3A2 253 aaKnown RBP14.64□□□□□ -0.07
LCA5-202ENST00000392959 RTCBQ9Y3I0 505 aaKnown RBP14.64□□□□□ -0.07
LCA5-202ENST00000392959 ABCC10Q5T3U5 1492 aa14.64□□□□□ -0.07
LCA5-202ENST00000392959 ETF1P62495 437 aaKnown RBP14.64□□□□□ -0.07
LCA5-202ENST00000392959 HERC4Q5GLZ8 1057 aaPredicted RBP14.64□□□□□ -0.07
LCA5-202ENST00000392959 LPIN2Q92539 896 aa14.64□□□□□ -0.07
LCA5-202ENST00000392959 ZNF274Q96GC6 653 aaPredicted RBP14.64□□□□□ -0.07
LCA5-202ENST00000392959 TRIM7Q9C029 511 aa14.64□□□□□ -0.07
LCA5-202ENST00000392959 SWAP70Q9UH65 585 aa14.64□□□□□ -0.07
LCA5-202ENST00000392959 IBTKQ9P2D0 1353 aaPredicted RBP14.64□□□□□ -0.07
LCA5-202ENST00000392959 WDR7Q9Y4E6 1490 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 PABPN1LA6NDY0 278 aaKnown RBP14.63□□□□□ -0.07
LCA5-202ENST00000392959 HIBADHP31937 336 aaKnown RBP14.63□□□□□ -0.07
LCA5-202ENST00000392959 ZAP70P43403 619 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 ERCC6LQ2NKX8 1250 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 NELFBQ8WX92 580 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 CABS1Q96KC9 395 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 TRIM31Q9BZY9 425 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 ZNF215Q9UL58 517 aaPredicted RBP14.63□□□□□ -0.07
LCA5-202ENST00000392959 PFKFB1P16118 471 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 ADKP55263 362 aaKnown RBP14.63□□□□□ -0.07
LCA5-202ENST00000392959 KRT25Q7Z3Z0 450 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 GPT2Q8TD30 523 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 RABEP2Q9H5N1 569 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.63□□□□□ -0.07
LCA5-202ENST00000392959 SERTAD1Q9UHV2 236 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 TBX22Q9Y458 520 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 A0A1B0GUA9 196 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 A1BGP04217 495 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 ERCC5P28715 1186 aaPredicted RBP14.63□□□□□ -0.07
LCA5-202ENST00000392959 ARL1P40616 181 aaPredicted RBP14.63□□□□□ -0.07
LCA5-202ENST00000392959 PTH1RQ03431 593 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 PNOCQ13519 176 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 NAA25Q14CX7 972 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 SNX29Q8TEQ0 813 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 CCDC51Q96ER9 411 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 EIF4A1P60842 406 aaKnown RBP14.63□□□□□ -0.07
LCA5-202ENST00000392959 CTDSPL2Q05D32 466 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 BIRC3Q13489 604 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 CFAP221Q4G0U5 840 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 ZNF365Q70YC5 407 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 KIFAP3Q92845 792 aa14.63□□□□□ -0.07
LCA5-202ENST00000392959 MRFAP1L1Q96HT8 127 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms