RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 GRAPQ13588 217 aa29.66■■■□□ 2.34
SMARCD3-203ENST00000392811 GRAPLQ8TC17 118 aaPredicted RBP29.66■■■□□ 2.34
SMARCD3-203ENST00000392811 ZNF830Q96NB3 372 aaPredicted RBP29.66■■■□□ 2.34
SMARCD3-203ENST00000392811 C11orf57Q6ZUT1 292 aaPredicted RBP29.66■■■□□ 2.34
SMARCD3-203ENST00000392811 CRACR2BQ8N4Y2 399 aaPredicted RBP29.66■■■□□ 2.34
SMARCD3-203ENST00000392811 JAG2Q9Y219 1238 aa29.66■■■□□ 2.34
SMARCD3-203ENST00000392811 MYH2Q9UKX2 1941 aa29.65■■■□□ 2.34
SMARCD3-203ENST00000392811 USP17L12C9JPN9 530 aa29.65■■■□□ 2.34
SMARCD3-203ENST00000392811 USP17L21D6R901 530 aa29.65■■■□□ 2.34
SMARCD3-203ENST00000392811 FGRP09769 529 aa29.65■■■□□ 2.34
SMARCD3-203ENST00000392811 CMTR1Q8N1G2 835 aaKnown RBP29.65■■■□□ 2.34
SMARCD3-203ENST00000392811 ZSCAN10Q96SZ4 725 aaPredicted RBP29.65■■■□□ 2.34
SMARCD3-203ENST00000392811 WDHD1O75717 1129 aaPredicted RBP29.64■■■□□ 2.34
SMARCD3-203ENST00000392811 CCDC82Q8N4S0 544 aa29.64■■■□□ 2.34
SMARCD3-203ENST00000392811 ENAHQ8N8S7 591 aaPredicted RBP29.64■■■□□ 2.34
SMARCD3-203ENST00000392811 CRNKL1Q9BZJ0 848 aaKnown RBP29.64■■■□□ 2.34
SMARCD3-203ENST00000392811 ANKIB1Q9P2G1 1089 aa29.64■■■□□ 2.34
SMARCD3-203ENST00000392811 TRPC5Q9UL62 973 aaPredicted RBP29.64■■■□□ 2.34
SMARCD3-203ENST00000392811 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.64■■■□□ 2.33
SMARCD3-203ENST00000392811 ZBTB22O15209 634 aa29.64■■■□□ 2.33
SMARCD3-203ENST00000392811 PRDM1O75626 825 aa29.64■■■□□ 2.33
SMARCD3-203ENST00000392811 ADRA2BP18089 450 aa29.64■■■□□ 2.33
SMARCD3-203ENST00000392811 MARCKSP29966 332 aaPredicted RBP29.64■■■□□ 2.33
SMARCD3-203ENST00000392811 MAP3K14Q99558 947 aa29.64■■■□□ 2.33
SMARCD3-203ENST00000392811 SDF4Q9BRK5 362 aa29.64■■■□□ 2.33
SMARCD3-203ENST00000392811 TTC12Q9H892 705 aaPredicted RBP29.64■■■□□ 2.33
SMARCD3-203ENST00000392811 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.64■■■□□ 2.33
SMARCD3-203ENST00000392811 CCDC88AQ3V6T2 1871 aa29.63■■■□□ 2.33
SMARCD3-203ENST00000392811 PCP11498 1178 aaKnown RBP29.63■■■□□ 2.33
SMARCD3-203ENST00000392811 CMA1P23946 247 aa29.63■■■□□ 2.33
SMARCD3-203ENST00000392811 PTPAQ15257 358 aa29.63■■■□□ 2.33
SMARCD3-203ENST00000392811 DCP1AQ9NPI6 582 aaPredicted RBP29.63■■■□□ 2.33
SMARCD3-203ENST00000392811 DEXIO95424 95 aa29.62■■■□□ 2.33
SMARCD3-203ENST00000392811 MMP1P03956 469 aa29.62■■■□□ 2.33
SMARCD3-203ENST00000392811 IQCB1Q15051 598 aa29.62■■■□□ 2.33
SMARCD3-203ENST00000392811 ERCC4Q92889 916 aaPredicted RBP29.62■■■□□ 2.33
SMARCD3-203ENST00000392811 HSPA1LP34931 641 aa29.62■■■□□ 2.33
SMARCD3-203ENST00000392811 EVX2Q03828 476 aa29.62■■■□□ 2.33
SMARCD3-203ENST00000392811 PRR5LQ6MZQ0 368 aa29.62■■■□□ 2.33
SMARCD3-203ENST00000392811 MROH7-TTC4A0A0A0MT08 1334 aa29.61■■■□□ 2.33
SMARCD3-203ENST00000392811 PPP6R2O75170 966 aa29.61■■■□□ 2.33
SMARCD3-203ENST00000392811 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.61■■■□□ 2.33
SMARCD3-203ENST00000392811 SPC24Q8NBT2 197 aa29.61■■■□□ 2.33
SMARCD3-203ENST00000392811 KCNJ14Q9UNX9 436 aa29.61■■■□□ 2.33
SMARCD3-203ENST00000392811 LEMD3Q9Y2U8 911 aa29.61■■■□□ 2.33
SMARCD3-203ENST00000392811 A0A087WWV3 80 aa29.61■■■□□ 2.33
SMARCD3-203ENST00000392811 PFKFB1P16118 471 aa29.61■■■□□ 2.33
SMARCD3-203ENST00000392811 KIAA2012Q0VF49 1180 aa29.61■■■□□ 2.33
SMARCD3-203ENST00000392811 TMED8Q6PL24 325 aaPredicted RBP29.61■■■□□ 2.33
SMARCD3-203ENST00000392811 NOSTRINQ8IVI9 506 aa29.61■■■□□ 2.33
SMARCD3-203ENST00000392811 ATP8A2Q9NTI2 1148 aa29.61■■■□□ 2.33
SMARCD3-203ENST00000392811 ANO10Q9NW15 660 aa29.61■■■□□ 2.33
SMARCD3-203ENST00000392811 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.61■■■□□ 2.33
SMARCD3-203ENST00000392811 UBR3Q6ZT12 1888 aa29.6■■■□□ 2.33
SMARCD3-203ENST00000392811 LAMB1P07942 1786 aa29.6■■■□□ 2.33
SMARCD3-203ENST00000392811 BTBD18B2RXH4 712 aa29.6■■■□□ 2.33
SMARCD3-203ENST00000392811 SPTY2D1Q68D10 685 aaPredicted RBP29.6■■■□□ 2.33
SMARCD3-203ENST00000392811 IQCA1Q86XH1 822 aa29.6■■■□□ 2.33
SMARCD3-203ENST00000392811 ZNF202O95125 648 aa29.59■■■□□ 2.33
SMARCD3-203ENST00000392811 PPP2R5BQ15173 497 aa29.59■■■□□ 2.33
SMARCD3-203ENST00000392811 SAFBQ15424 915 aaKnown RBP eCLIP29.59■■■□□ 2.33
SMARCD3-203ENST00000392811 IFIT1BQ5T764 474 aaKnown RBP29.59■■■□□ 2.33
SMARCD3-203ENST00000392811 DZIP1Q86YF9 867 aaKnown RBP29.59■■■□□ 2.33
SMARCD3-203ENST00000392811 DIS3L2Q8IYB7 885 aaKnown RBP29.59■■■□□ 2.33
SMARCD3-203ENST00000392811 JMYQ8N9B5 988 aa29.59■■■□□ 2.33
SMARCD3-203ENST00000392811 DLEC1Q9Y238 1755 aa29.59■■■□□ 2.33
SMARCD3-203ENST00000392811 XDHP47989 1333 aa29.58■■■□□ 2.33
SMARCD3-203ENST00000392811 PLA2G4DQ86XP0 818 aa29.58■■■□□ 2.33
SMARCD3-203ENST00000392811 ORC4O43929 436 aa29.57■■■□□ 2.32
SMARCD3-203ENST00000392811 GYS1P13807 737 aa29.57■■■□□ 2.32
SMARCD3-203ENST00000392811 ZNF75DP51815 510 aa29.57■■■□□ 2.32
SMARCD3-203ENST00000392811 CATIPQ7Z7H3 387 aa29.57■■■□□ 2.32
SMARCD3-203ENST00000392811 TRIM5Q9C035 493 aa29.57■■■□□ 2.32
SMARCD3-203ENST00000392811 KIAA1551Q9HCM1 1747 aa29.57■■■□□ 2.32
SMARCD3-203ENST00000392811 GOLGA6L6A8MZA4 724 aa29.57■■■□□ 2.32
SMARCD3-203ENST00000392811 CYP2D6P10635 497 aa29.57■■■□□ 2.32
SMARCD3-203ENST00000392811 RNF26Q9BY78 433 aaPredicted RBP29.57■■■□□ 2.32
SMARCD3-203ENST00000392811 KIAA1468Q9P260 1216 aa29.57■■■□□ 2.32
SMARCD3-203ENST00000392811 ARPP21Q9UBL0 812 aaPredicted RBP29.57■■■□□ 2.32
SMARCD3-203ENST00000392811 GOLGA6L19H0YKK7 550 aa29.56■■■□□ 2.32
SMARCD3-203ENST00000392811 SBK1Q52WX2 424 aa29.56■■■□□ 2.32
SMARCD3-203ENST00000392811 SHC4Q6S5L8 630 aa29.56■■■□□ 2.32
SMARCD3-203ENST00000392811 WDR66Q8TBY9 1149 aa29.56■■■□□ 2.32
SMARCD3-203ENST00000392811 RPGRQ92834 1020 aaKnown RBP29.56■■■□□ 2.32
SMARCD3-203ENST00000392811 FOXP1Q9H334 677 aaPredicted RBP29.56■■■□□ 2.32
SMARCD3-203ENST00000392811 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.56■■■□□ 2.32
SMARCD3-203ENST00000392811 TPM3P06753 285 aa29.55■■■□□ 2.32
SMARCD3-203ENST00000392811 MYH6P13533 1939 aa29.55■■■□□ 2.32
SMARCD3-203ENST00000392811 LDHBP07195 334 aaKnown RBP29.55■■■□□ 2.32
SMARCD3-203ENST00000392811 CERKQ8TCT0 537 aa29.55■■■□□ 2.32
SMARCD3-203ENST00000392811 GPR101Q96P66 508 aaPredicted RBP29.55■■■□□ 2.32
SMARCD3-203ENST00000392811 HPSEQ9Y251 543 aa29.55■■■□□ 2.32
SMARCD3-203ENST00000392811 TOB1P50616 345 aaPredicted RBP29.54■■■□□ 2.32
SMARCD3-203ENST00000392811 FUT2Q10981 343 aa29.54■■■□□ 2.32
SMARCD3-203ENST00000392811 TROAPQ12815 778 aa29.54■■■□□ 2.32
SMARCD3-203ENST00000392811 DHX40Q8IX18 779 aaKnown RBP29.54■■■□□ 2.32
SMARCD3-203ENST00000392811 CEP57L1Q8IYX8 460 aa29.54■■■□□ 2.32
SMARCD3-203ENST00000392811 KCNF1Q9H3M0 494 aa29.54■■■□□ 2.32
SMARCD3-203ENST00000392811 SLC3A2P08195 630 aaKnown RBP29.54■■■□□ 2.32
SMARCD3-203ENST00000392811 CRY2Q49AN0 593 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms