RNA–Protein interactions for RNA: ENST00000392521.6

CIT-203, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CIT, Length 8,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-203ENST00000392521 PPP1R2P41236 205 aa13.21□□□□□ -0.3
CIT-203ENST00000392521 CDR2Q01850 454 aa13.21□□□□□ -0.3
CIT-203ENST00000392521 MAPK8IP1Q9UQF2 711 aa13.2□□□□□ -0.3
CIT-203ENST00000392521 EFCAB5A4FU69 1503 aa13.2□□□□□ -0.3
CIT-203ENST00000392521 TUBBP07437 444 aa13.2□□□□□ -0.3
CIT-203ENST00000392521 PLCD1P51178 756 aa13.2□□□□□ -0.3
CIT-203ENST00000392521 LMBR1LQ6UX01 489 aa13.2□□□□□ -0.3
CIT-203ENST00000392521 VCX3AQ9NNX9 186 aa13.2□□□□□ -0.3
CIT-203ENST00000392521 TSTA3Q13630 321 aaPredicted RBP13.2□□□□□ -0.3
CIT-203ENST00000392521 HELBQ8NG08 1087 aaPredicted RBP13.2□□□□□ -0.3
CIT-203ENST00000392521 ZRANB1Q9UGI0 708 aa13.2□□□□□ -0.3
CIT-203ENST00000392521 SMIM24O75264 130 aa13.2□□□□□ -0.3
CIT-203ENST00000392521 GIGYF1O75420 1035 aaPredicted RBP13.2□□□□□ -0.3
CIT-203ENST00000392521 BRAPQ7Z569 592 aa13.2□□□□□ -0.3
CIT-203ENST00000392521 SKAP1Q86WV1 359 aa13.2□□□□□ -0.3
CIT-203ENST00000392521 MYCT1Q8N699 235 aa13.2□□□□□ -0.3
CIT-203ENST00000392521 BAG5Q9UL15 447 aa13.2□□□□□ -0.3
CIT-203ENST00000392521 TOM1O60784 492 aa13.2□□□□□ -0.3
CIT-203ENST00000392521 SND1Q7KZF4 910 aaKnown RBP eCLIP13.2□□□□□ -0.3
CIT-203ENST00000392521 BANK1Q8NDB2 785 aa13.2□□□□□ -0.3
CIT-203ENST00000392521 SCYL1Q96KG9 808 aa13.2□□□□□ -0.3
CIT-203ENST00000392521 ELP1O95163 1332 aa13.2□□□□□ -0.3
CIT-203ENST00000392521 SLC39A6Q13433 755 aa13.2□□□□□ -0.3
CIT-203ENST00000392521 NCAPH2Q6IBW4 605 aa13.2□□□□□ -0.3
CIT-203ENST00000392521 CYP26C1Q6V0L0 522 aa13.2□□□□□ -0.3
CIT-203ENST00000392521 VSIG1Q86XK7 387 aa13.2□□□□□ -0.3
CIT-203ENST00000392521 MBIPQ9NS73 344 aa13.2□□□□□ -0.3
CIT-203ENST00000392521 BCAP29Q9UHQ4 241 aa13.2□□□□□ -0.3
CIT-203ENST00000392521 STK24Q9Y6E0 443 aa13.2□□□□□ -0.3
CIT-203ENST00000392521 A0A1B0GUA9 196 aa13.19□□□□□ -0.3
CIT-203ENST00000392521 CAPN9O14815 690 aa13.19□□□□□ -0.3
CIT-203ENST00000392521 F13A1P00488 732 aa13.19□□□□□ -0.3
CIT-203ENST00000392521 SF3A3Q12874 501 aaKnown RBP eCLIP13.19□□□□□ -0.3
CIT-203ENST00000392521 NMIQ13287 307 aaPredicted RBP13.19□□□□□ -0.3
CIT-203ENST00000392521 TTC6Q86TZ1 520 aa13.19□□□□□ -0.3
CIT-203ENST00000392521 PDZD8Q8NEN9 1154 aa13.19□□□□□ -0.3
CIT-203ENST00000392521 MGARPQ8TDB4 240 aa13.19□□□□□ -0.3
CIT-203ENST00000392521 KRT12Q99456 494 aa13.19□□□□□ -0.3
CIT-203ENST00000392521 TBC1D7Q9P0N9 293 aa13.19□□□□□ -0.3
CIT-203ENST00000392521 FAM47CQ5HY64 1035 aa13.19□□□□□ -0.3
CIT-203ENST00000392521 ESYT1Q9BSJ8 1104 aa13.19□□□□□ -0.3
CIT-203ENST00000392521 MYO1AQ9UBC5 1043 aa13.19□□□□□ -0.3
CIT-203ENST00000392521 POLR2DO15514 142 aaKnown RBP13.19□□□□□ -0.3
CIT-203ENST00000392521 BEND3Q5T5X7 828 aa13.19□□□□□ -0.3
CIT-203ENST00000392521 TSPYL2Q9H2G4 693 aaPredicted RBP13.19□□□□□ -0.3
CIT-203ENST00000392521 IRS4O14654 1257 aaPredicted RBP13.18□□□□□ -0.3
CIT-203ENST00000392521 NUCB1Q02818 461 aa13.18□□□□□ -0.3
CIT-203ENST00000392521 FNBP4Q8N3X1 1017 aaPredicted RBP13.18□□□□□ -0.3
CIT-203ENST00000392521 IFRD2Q12894 506 aaPredicted RBP13.18□□□□□ -0.3
CIT-203ENST00000392521 MRPL46Q9H2W6 279 aaKnown RBP13.18□□□□□ -0.3
CIT-203ENST00000392521 DDX21Q9NR30 783 aaKnown RBP eCLIP13.18□□□□□ -0.3
CIT-203ENST00000392521 NDUFAB1O14561 156 aa13.18□□□□□ -0.3
CIT-203ENST00000392521 CCDC105Q8IYK2 499 aa13.18□□□□□ -0.3
CIT-203ENST00000392521 SMCR8Q8TEV9 937 aaPredicted RBP13.18□□□□□ -0.3
CIT-203ENST00000392521 COG7P83436 770 aa13.18□□□□□ -0.3
CIT-203ENST00000392521 TCIRG1Q13488 830 aa13.18□□□□□ -0.3
CIT-203ENST00000392521 PALM2Q8IXS6 379 aa13.18□□□□□ -0.3
CIT-203ENST00000392521 PDCD7Q8N8D1 485 aaKnown RBP13.18□□□□□ -0.3
CIT-203ENST00000392521 UIMC1Q96RL1 719 aa13.18□□□□□ -0.3
CIT-203ENST00000392521 NAPGQ99747 312 aaPredicted RBP13.18□□□□□ -0.3
CIT-203ENST00000392521 CD19P15391 556 aa13.18□□□□□ -0.3
CIT-203ENST00000392521 RASSF2P50749 326 aa13.18□□□□□ -0.3
CIT-203ENST00000392521 IRX4P78413 519 aa13.18□□□□□ -0.3
CIT-203ENST00000392521 PRKG1Q13976 671 aa13.18□□□□□ -0.3
CIT-203ENST00000392521 TNNI1P19237 187 aa13.18□□□□□ -0.3
CIT-203ENST00000392521 TRIM14Q14142 442 aa13.18□□□□□ -0.3
CIT-203ENST00000392521 CALCRLQ16602 461 aa13.18□□□□□ -0.3
CIT-203ENST00000392521 EAPPQ56P03 285 aaPredicted RBP13.18□□□□□ -0.3
CIT-203ENST00000392521 PFDN6O15212 129 aa13.18□□□□□ -0.3
CIT-203ENST00000392521 DNM3Q9UQ16 869 aa13.18□□□□□ -0.3
CIT-203ENST00000392521 ZBED4O75132 1171 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 SLC9C1Q4G0N8 1177 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 CPXCR1Q8N123 301 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 IGSF22Q8N9C0 903 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 FAM193BQ96PV7 902 aaPredicted RBP13.17□□□□□ -0.3
CIT-203ENST00000392521 TRAPPC3LQ5T215 181 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 RNF169Q8NCN4 708 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 POMGNT1Q8WZA1 660 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 STK38LQ9Y2H1 464 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 A0A1B0GVL5 298 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 IRX3P78415 501 aaPredicted RBP13.17□□□□□ -0.3
CIT-203ENST00000392521 CXorf38Q8TB03 319 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 PARD3BQ8TEW8 1205 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 SEPT8Q92599 483 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 ANKRD20A3Q5VUR7 823 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 TRIM50Q86XT4 487 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 SDCCAG3Q96C92 435 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 HOOK2Q96ED9 719 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 MYO10Q9HD67 2058 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 RNF113AO15541 343 aaKnown RBP13.17□□□□□ -0.3
CIT-203ENST00000392521 MX2P20592 715 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 RUFY3Q7L099 469 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 SYCE1Q8N0S2 351 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 ST7Q9NRC1 585 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 SPDYE2BA6NHP3 402 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 SPDYE6P0CI01 402 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 SYNRGQ9UMZ2 1314 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 TXKP42681 527 aa13.17□□□□□ -0.3
CIT-203ENST00000392521 YARSP54577 528 aaKnown RBP13.17□□□□□ -0.3
CIT-203ENST00000392521 PPP4R4Q6NUP7 873 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms