RNA–Protein interactions for RNA: ENST00000392129.10

TMCO1-202, Transcript of transmembrane and coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO1, Length 1,946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-202ENST00000392129 H3BQV1 296 aa14.34□□□□□ -0.11
TMCO1-202ENST00000392129 PPFIA3O75145 1194 aa14.34□□□□□ -0.11
TMCO1-202ENST00000392129 RXRAP19793 462 aa14.34□□□□□ -0.11
TMCO1-202ENST00000392129 POLD1P28340 1107 aa14.34□□□□□ -0.11
TMCO1-202ENST00000392129 DACT2Q5SW24 774 aa14.34□□□□□ -0.11
TMCO1-202ENST00000392129 IFFO2Q5TF58 517 aa14.34□□□□□ -0.11
TMCO1-202ENST00000392129 HHIPL2Q6UWX4 724 aa14.34□□□□□ -0.11
TMCO1-202ENST00000392129 IQCA1Q86XH1 822 aa14.34□□□□□ -0.11
TMCO1-202ENST00000392129 FAM217BQ9NTX9 383 aaPredicted RBP14.34□□□□□ -0.11
TMCO1-202ENST00000392129 USP17L3A6NCW0 530 aa14.33□□□□□ -0.11
TMCO1-202ENST00000392129 USP17L4A6NCW7 530 aa14.33□□□□□ -0.11
TMCO1-202ENST00000392129 GOLGA8AA7E2F4 631 aa14.33□□□□□ -0.11
TMCO1-202ENST00000392129 PPIP5K2O43314 1243 aa14.33□□□□□ -0.11
TMCO1-202ENST00000392129 CDC27P30260 824 aa14.33□□□□□ -0.11
TMCO1-202ENST00000392129 NT5C2P49902 561 aa14.33□□□□□ -0.11
TMCO1-202ENST00000392129 SCNN1DP51172 638 aa14.33□□□□□ -0.11
TMCO1-202ENST00000392129 PLCD1P51178 756 aa14.33□□□□□ -0.11
TMCO1-202ENST00000392129 SLC4A8Q2Y0W8 1093 aa14.33□□□□□ -0.11
TMCO1-202ENST00000392129 USP17L1Q7RTZ2 530 aa14.33□□□□□ -0.11
TMCO1-202ENST00000392129 FERMT3Q86UX7 667 aa14.33□□□□□ -0.11
TMCO1-202ENST00000392129 PSMD1Q99460 953 aa14.33□□□□□ -0.11
TMCO1-202ENST00000392129 MYL10Q9BUA6 226 aa14.33□□□□□ -0.11
TMCO1-202ENST00000392129 MRIQ9BWK5 157 aa14.33□□□□□ -0.11
TMCO1-202ENST00000392129 FLT1P17948 1338 aa14.33□□□□□ -0.12
TMCO1-202ENST00000392129 CDKL5O76039 1030 aa14.33□□□□□ -0.12
TMCO1-202ENST00000392129 POLR3DP05423 398 aaPredicted RBP14.33□□□□□ -0.12
TMCO1-202ENST00000392129 RCAN1P53805 252 aa14.33□□□□□ -0.12
TMCO1-202ENST00000392129 R3HDM1Q15032 1099 aaKnown RBP14.33□□□□□ -0.12
TMCO1-202ENST00000392129 KLHL40Q2TBA0 621 aa14.33□□□□□ -0.12
TMCO1-202ENST00000392129 CPLX2Q6PUV4 134 aaKnown RBP14.33□□□□□ -0.12
TMCO1-202ENST00000392129 ENAHQ8N8S7 591 aaPredicted RBP14.33□□□□□ -0.12
TMCO1-202ENST00000392129 TEKT1Q969V4 418 aa14.33□□□□□ -0.12
TMCO1-202ENST00000392129 ORC3Q9UBD5 711 aaPredicted RBP14.33□□□□□ -0.12
TMCO1-202ENST00000392129 SAP30BPQ9UHR5 308 aaKnown RBP14.33□□□□□ -0.12
TMCO1-202ENST00000392129 DDX49Q9Y6V7 483 aaKnown RBP14.33□□□□□ -0.12
TMCO1-202ENST00000392129 ROBO3Q96MS0 1386 aa14.32□□□□□ -0.12
TMCO1-202ENST00000392129 DLEC1Q9Y238 1755 aa14.32□□□□□ -0.12
TMCO1-202ENST00000392129 NTRK3Q16288 839 aa14.32□□□□□ -0.12
TMCO1-202ENST00000392129 FAM47AQ5JRC9 791 aa14.32□□□□□ -0.12
TMCO1-202ENST00000392129 ILDR1Q86SU0 546 aaPredicted RBP14.32□□□□□ -0.12
TMCO1-202ENST00000392129 USP48Q86UV5 1035 aa14.32□□□□□ -0.12
TMCO1-202ENST00000392129 CCDC144CPQ8IYA2 1237 aa14.32□□□□□ -0.12
TMCO1-202ENST00000392129 DYNLL2Q96FJ2 89 aa14.32□□□□□ -0.12
TMCO1-202ENST00000392129 PIM2Q9P1W9 311 aa14.32□□□□□ -0.12
TMCO1-202ENST00000392129 NID2Q14112 1375 aa14.32□□□□□ -0.12
TMCO1-202ENST00000392129 DNM1Q05193 864 aaKnown RBP14.31□□□□□ -0.12
TMCO1-202ENST00000392129 IFIT1BQ5T764 474 aaKnown RBP14.31□□□□□ -0.12
TMCO1-202ENST00000392129 APOBEC3HQ6NTF7 200 aaKnown RBP14.31□□□□□ -0.12
TMCO1-202ENST00000392129 ZNF654Q8IZM8 581 aa14.31□□□□□ -0.12
TMCO1-202ENST00000392129 TMEM87AQ8NBN3 555 aa14.31□□□□□ -0.12
TMCO1-202ENST00000392129 MKNK2Q9HBH9 465 aa14.31□□□□□ -0.12
TMCO1-202ENST00000392129 GDPD2Q9HCC8 539 aa14.31□□□□□ -0.12
TMCO1-202ENST00000392129 CNPY2Q9Y2B0 182 aa14.31□□□□□ -0.12
TMCO1-202ENST00000392129 TSPY2A6NKD2 308 aa14.31□□□□□ -0.12
TMCO1-202ENST00000392129 CRKP46108 304 aa14.31□□□□□ -0.12
TMCO1-202ENST00000392129 HDLBPQ00341 1268 aaKnown RBP14.31□□□□□ -0.12
TMCO1-202ENST00000392129 KIAA0825Q8IV33 1275 aa14.31□□□□□ -0.12
TMCO1-202ENST00000392129 FANCBQ8NB91 859 aa14.31□□□□□ -0.12
TMCO1-202ENST00000392129 UPF1Q92900 1129 aaKnown RBP eCLIP14.31□□□□□ -0.129e-10■■■□□ 16.4
TMCO1-202ENST00000392129 ZDHHC15Q96MV8 337 aa14.31□□□□□ -0.12
TMCO1-202ENST00000392129 GZF1Q9H116 711 aaPredicted RBP14.31□□□□□ -0.12
TMCO1-202ENST00000392129 ZSCAN16Q9H4T2 348 aaPredicted RBP14.31□□□□□ -0.12
TMCO1-202ENST00000392129 USP40Q9NVE5 1235 aa14.31□□□□□ -0.12
TMCO1-202ENST00000392129 KIF13BQ9NQT8 1826 aa14.3□□□□□ -0.12
TMCO1-202ENST00000392129 LAMB1P07942 1786 aa14.3□□□□□ -0.12
TMCO1-202ENST00000392129 CCDC196A0A1B0GTZ2 297 aa14.3□□□□□ -0.12
TMCO1-202ENST00000392129 YDJCA8MPS7 323 aa14.3□□□□□ -0.12
TMCO1-202ENST00000392129 WDHD1O75717 1129 aaPredicted RBP14.3□□□□□ -0.12
TMCO1-202ENST00000392129 TFAP4Q01664 338 aa14.3□□□□□ -0.12
TMCO1-202ENST00000392129 RESTQ13127 1097 aa14.3□□□□□ -0.12
TMCO1-202ENST00000392129 PPP2R5BQ15173 497 aa14.3□□□□□ -0.12
TMCO1-202ENST00000392129 RTN1Q16799 776 aa14.3□□□□□ -0.12
TMCO1-202ENST00000392129 SOGA3Q5TF21 947 aa14.3□□□□□ -0.12
TMCO1-202ENST00000392129 CDC42EP5Q6NZY7 148 aa14.3□□□□□ -0.12
TMCO1-202ENST00000392129 ZNF287Q9HBT7 754 aa14.3□□□□□ -0.12
TMCO1-202ENST00000392129 SCN9AQ15858 1988 aa14.3□□□□□ -0.12
TMCO1-202ENST00000392129 NMT2O60551 498 aa14.29□□□□□ -0.12
TMCO1-202ENST00000392129 IFNAR1P17181 557 aa14.29□□□□□ -0.12
TMCO1-202ENST00000392129 NCLP19338 710 aaKnown RBP14.29□□□□□ -0.12
TMCO1-202ENST00000392129 IARSP41252 1262 aaKnown RBP14.29□□□□□ -0.12
TMCO1-202ENST00000392129 FOSBP53539 338 aa14.29□□□□□ -0.12
TMCO1-202ENST00000392129 FAM173BQ6P4H8 233 aa14.29□□□□□ -0.12
TMCO1-202ENST00000392129 C16orf86Q6ZW13 317 aa14.29□□□□□ -0.12
TMCO1-202ENST00000392129 CATIPQ7Z7H3 387 aa14.29□□□□□ -0.12
TMCO1-202ENST00000392129 RGS22Q8NE09 1264 aa14.29□□□□□ -0.12
TMCO1-202ENST00000392129 GPT2Q8TD30 523 aa14.29□□□□□ -0.12
TMCO1-202ENST00000392129 NUP133Q8WUM0 1156 aa14.29□□□□□ -0.12
TMCO1-202ENST00000392129 PHKBQ93100 1093 aa14.29□□□□□ -0.12
TMCO1-202ENST00000392129 C8orf76Q96K31 380 aa14.29□□□□□ -0.12
TMCO1-202ENST00000392129 VPS33BQ9H267 617 aa14.29□□□□□ -0.12
TMCO1-202ENST00000392129 TCHHQ07283 1943 aa14.29□□□□□ -0.12
TMCO1-202ENST00000392129 KRT85P78386 507 aa14.29□□□□□ -0.12
TMCO1-202ENST00000392129 GUCY1B3Q02153 619 aa14.29□□□□□ -0.12
TMCO1-202ENST00000392129 PICALMQ13492 652 aa14.29□□□□□ -0.12
TMCO1-202ENST00000392129 ZNF444Q8N0Y2 327 aaPredicted RBP14.29□□□□□ -0.12
TMCO1-202ENST00000392129 LARGE2Q8N3Y3 721 aa14.29□□□□□ -0.12
TMCO1-202ENST00000392129 SLC44A5Q8NCS7 719 aa14.29□□□□□ -0.12
TMCO1-202ENST00000392129 FBXO18Q8NFZ0 1043 aa14.29□□□□□ -0.12
TMCO1-202ENST00000392129 SGIP1Q9BQI5 828 aa14.29□□□□□ -0.12
TMCO1-202ENST00000392129 DDX4Q9NQI0 724 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms